E3 ubiquitin-protein ligase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 352 |
| AccB1I | GGYRCC | 1 cut(s) | 352 |
| AciI | CCGC | 1 cut(s) | 147 |
| AcoI | YGGCCR | 1 cut(s) | 35 |
| AfaI | GTAC | 1 cut(s) | 354 |
| AgsI | TTSAA | 3 cut(s) | 49, 139, 299 |
| AluBI | AGCT | 4 cut(s) | 20, 64, 83, 263 |
| AluI | AGCT | 4 cut(s) | 20, 64, 83, 263 |
| AoxI | GGCC | 2 cut(s) | 35, 96 |
| ApeKI | GCWGC | 1 cut(s) | 260 |
| Asp718I | GGTACC | 1 cut(s) | 352 |
| AsuHPI | GGTGA | 1 cut(s) | 33 |
| BalI | TGGCCA | 1 cut(s) | 37 |
| BanI | GGYRCC | 1 cut(s) | 352 |
| BbvI | GCAGC | 1 cut(s) | 272 |
| BccI | CCATC | 4 cut(s) | 46, 175, 193, 248 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 150, 184 |
| BfaI | CTAG | 1 cut(s) | 275 |
| BisI | GCNGC | 1 cut(s) | 261 |
| BlpI | GCTNAGC | 1 cut(s) | 21 |
| BlsI | GCNGC | 1 cut(s) | 262 |
| BmiI | GGNNCC | 1 cut(s) | 354 |
| BmsI | GCATC | 1 cut(s) | 170 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 21 |
| BpuEI | CTTGAG | 1 cut(s) | 265 |
| BsaBI | GATNNNNATC | 1 cut(s) | 207 |
| Bse8I | GATNNNNATC | 1 cut(s) | 207 |
| BseGI | GGATG | 2 cut(s) | 204, 208 |
| BseJI | GATNNNNATC | 1 cut(s) | 207 |
| BseMII | CTCAG | 2 cut(s) | 12, 207 |
| BseRI | GAGGAG | 1 cut(s) | 86 |
| BseXI | GCAGC | 1 cut(s) | 272 |
| BsgI | GTGCAG | 1 cut(s) | 279 |
| BshFI | GGCC | 2 cut(s) | 37, 98 |
| BshNI | GGYRCC | 1 cut(s) | 352 |
| BsmI | GAATGC | 2 cut(s) | 172, 184 |
| BsnI | GGCC | 2 cut(s) | 37, 98 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 21 |
| BspACI | CCGC | 1 cut(s) | 147 |
| BspANI | GGCC | 2 cut(s) | 37, 98 |
| BspCNI | CTCAG | 2 cut(s) | 13, 208 |
| BspLI | GGNNCC | 1 cut(s) | 354 |
| BspT107I | GGYRCC | 1 cut(s) | 352 |
| BstDEI | CTNAG | 2 cut(s) | 21, 216 |
| BstF5I | GGATG | 2 cut(s) | 204, 208 |
| BstNSI | RCATGY | 1 cut(s) | 314 |
| BstV1I | GCAGC | 1 cut(s) | 272 |
| BsuRI | GGCC | 2 cut(s) | 37, 98 |
| BtgZI | GCGATG | 1 cut(s) | 153 |
| BtsCI | GGATG | 2 cut(s) | 204, 208 |
| BtsI | GCAGTG | 1 cut(s) | 256 |
| BtsIMutI | CAGTG | 1 cut(s) | 256 |
| Csp6I | GTAC | 1 cut(s) | 353 |
| CviAII | CATG | 1 cut(s) | 311 |
| CviJI | RGCY | 7 cut(s) | 20, 25, 37, 64, 83, 98, 263 |
| CviKI_1 | RGCY | 7 cut(s) | 20, 25, 37, 64, 83, 98, 263 |
| CviQI | GTAC | 1 cut(s) | 353 |
| DdeI | CTNAG | 2 cut(s) | 21, 216 |
| EaeI | YGGCCR | 1 cut(s) | 35 |
| Eco147I | AGGCCT | 1 cut(s) | 98 |
| FaeI | CATG | 1 cut(s) | 314 |
| FaiI | YATR | 4 cut(s) | 194, 224, 312, 402 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 119, 151 |
| FatI | CATG | 1 cut(s) | 310 |
| Fnu4HI | GCNGC | 1 cut(s) | 261 |
| FokI | GGATG | 2 cut(s) | 211, 215 |
| Fsp4HI | GCNGC | 1 cut(s) | 261 |
| FspBI | CTAG | 1 cut(s) | 275 |
| GluI | GCNGC | 1 cut(s) | 261 |
| HaeIII | GGCC | 2 cut(s) | 37, 98 |
| Hin1II | CATG | 1 cut(s) | 314 |
| HindIII | AAGCTT | 1 cut(s) | 81 |
| HinfI | GANTC | 1 cut(s) | 397 |
| HphI | GGTGA | 1 cut(s) | 33 |
| Hpy188I | TCNGA | 3 cut(s) | 178, 190, 217 |
| Hpy188III | TCNNGA | 3 cut(s) | 136, 244, 333 |
| HpyCH4V | TGCA | 4 cut(s) | 161, 184, 222, 260 |
| HpyF3I | CTNAG | 2 cut(s) | 21, 216 |
| Hsp92II | CATG | 1 cut(s) | 314 |
| KpnI | GGTACC | 1 cut(s) | 356 |
| LpnPI | CCDG | 3 cut(s) | 14, 80, 318 |
| Lsp1109I | GCAGC | 1 cut(s) | 272 |
| LweI | GCATC | 1 cut(s) | 170 |
| MaeI | CTAG | 1 cut(s) | 275 |
| MaeIII | GTNAC | 2 cut(s) | 149, 306 |
| MboII | GAAGA | 2 cut(s) | 139, 314 |
| MlsI | TGGCCA | 1 cut(s) | 37 |
| MluNI | TGGCCA | 1 cut(s) | 37 |
| MnlI | CCTC | 6 cut(s) | 36, 64, 67, 100, 114, 340 |
| Mox20I | TGGCCA | 1 cut(s) | 37 |
| MscI | TGGCCA | 1 cut(s) | 37 |
| MseI | TTAA | 2 cut(s) | 66, 101 |
| MslI | CAYNNNNRTG | 1 cut(s) | 177 |
| Msp20I | TGGCCA | 1 cut(s) | 37 |
| MspA1I | CMGCKG | 1 cut(s) | 20 |
| Mva1269I | GAATGC | 2 cut(s) | 172, 184 |
| NlaIII | CATG | 1 cut(s) | 314 |
| NlaIV | GGNNCC | 1 cut(s) | 354 |
| NspI | RCATGY | 1 cut(s) | 314 |
| PceI | AGGCCT | 1 cut(s) | 98 |
| PctI | GAATGC | 2 cut(s) | 172, 184 |
| PfeI | GAWTC | 1 cut(s) | 397 |
| PkrI | GCNGC | 1 cut(s) | 262 |
| PspN4I | GGNNCC | 1 cut(s) | 354 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 291, 323 |
| PvuII | CAGCTG | 1 cut(s) | 20 |
| RsaI | GTAC | 1 cut(s) | 354 |
| RsaNI | GTAC | 1 cut(s) | 353 |
| RseI | CAYNNNNRTG | 1 cut(s) | 177 |
| SaqAI | TTAA | 2 cut(s) | 66, 101 |
| SatI | GCNGC | 1 cut(s) | 261 |
| SetI | ASST | 5 cut(s) | 22, 46, 66, 85, 265 |
| SfaNI | GCATC | 1 cut(s) | 170 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 177 |
| SmlI | CTYRAG | 1 cut(s) | 244 |
| SmoI | CTYRAG | 1 cut(s) | 244 |
| SseBI | AGGCCT | 1 cut(s) | 98 |
| SsiI | CCGC | 1 cut(s) | 147 |
| SspMI | CTAG | 1 cut(s) | 275 |
| StuI | AGGCCT | 1 cut(s) | 98 |
| TfiI | GAWTC | 1 cut(s) | 397 |
| Tru1I | TTAA | 2 cut(s) | 66, 101 |
| Tru9I | TTAA | 2 cut(s) | 66, 101 |
| TscAI | CASTG | 1 cut(s) | 256 |
| TseI | GCWGC | 1 cut(s) | 260 |
| TspDTI | ATGAA | 3 cut(s) | 255, 314, 389 |
| TspGWI | ACGGA | 1 cut(s) | 119 |
| TspRI | CASTG | 1 cut(s) | 256 |
| XceI | RCATGY | 1 cut(s) | 314 |
| XspI | CTAG | 1 cut(s) | 275 |