MD08G1148300.v1.1

sugar phosphate phosphate translocator

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
14927471 .. 14928520
1050 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1148300.v1.1.491

Sequence Viewer

Length: 1050 bp
ATGGGCAAGGGTGGCTCCCTGAGCGAGAGCGTGGTAAAAAAGATCCTCCTCTCCTACACCTATGTCGCCATCTGGATCTTCCTCTCCTTCAGCGTCATCGTCTACAACAAATACATCCTCGACAAGAAGATGTACAACTGGCCCTTCCCCATTTCCCTCACCATGATCCACATGTCCTTCTGCGCCTCCCTCGCCTTCCTCCTCGTCCGCGTCTTCCGCCTCGTCGAGCCCGTCACCATGTCCCGCGACCTCTACCTCTCCTCCGTCGTCCCCATCGGCGCCCTCTACTCCCTCTCCCTCTGGCTCTCCAACTCCGCCTACATTTACCTCTCCGTCTCCTTCATCCAGATGCTCAAGGCCCTCATGCCCGTCGCTGTCTACTCCATCGGCGTCTCCTTCAAAAAAGAGTCCTTCAAGACCGACACCATGGTCAACATGATCTCCATCTCCATCGGCGTCGCCATCGCCGCCTACGGCGAGGCCCGATTCGACACCTGGGGCGTCATCCTCCAGCTCGGCGCCGTCGCATTTGAGGCCACCCGCCTTGTCTTGATCCAGATCCTCCTCACATCCAAAGGCATTACCCTTAACCCCATCACATCTCTCTACTACGTCGCGCCTTGCTGCTTGGCTTTCCTCTTCGTCCCCTGGATCTTCGCCGAGTACCCGGTTCTGCGCGATTCGTCGAGCTTCCATTTCGATTTCTTGATTTTTGGGACCAATTCTATCTGCGCATTTGCTCTGAATCTGGCCGTGTTCTTGCTCGTCGGAAAGACCTCGGCGCTGACGATGAATGTGGCTGGAGTGGTGAAAGACTGGCTCCTGATCGCCTTTTCGTGGTCCGTGATCAAGGACACCGTGACCCCGATCAATCTGTTCGGCTACGGCCTGGCGTTTTTGGGCGTTGCCTACTACAACAACTCCAAATTGCAGGCTCTGAAGGCCAAAGAGGCGCAGAAGAAGACGGCGCAGCACGACGAGGAGGCCAGTAGGCTCATGGAGGAGAGGGAAGGGGAAGGAATTGGGAAGAGGAACGAATCGCAGAATTGA

Protein Analysis

350

Amino Acids

38.9

Weight (kDa)

8.96

Isoelectric Point (pI)

27.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPT PF03151 20 - 306 7.7e-22 Triose-phosphate Transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 428
Acc16I TGCGCA 1 cut(s) 733
AccB1I GGYRCC 2 cut(s) 278, 518
AccI GTMKAC 2 cut(s) 102, 378
AccII CGCG 4 cut(s) 210, 246, 617, 678
AciI CCGC 6 cut(s) 208, 217, 244, 315, 468, 541
AclWI GGATC 6 cut(s) 37, 83, 160, 547, 553, 659
AcoI YGGCCR 1 cut(s) 750
AcuI CTGAAG 2 cut(s) 73, 959
AcyI GRCGYC 5 cut(s) 279, 390, 456, 501, 519
AfaI GTAC 2 cut(s) 134, 665
AfiI CCNNNNNNNGG 1 cut(s) 837
AflIII ACRYGT 1 cut(s) 171
AgsI TTSAA 2 cut(s) 400, 415
AjnI CCWGG 3 cut(s) 494, 647, 888
AluBI AGCT 2 cut(s) 514, 690
AluI AGCT 2 cut(s) 514, 690
Alw26I GTCTC 2 cut(s) 340, 397
AlwI GGATC 6 cut(s) 37, 83, 160, 547, 553, 659
AlwNI CAGNNNCTG 1 cut(s) 937
AoxI GGCC 8 cut(s) 140, 357, 480, 534, 750, 886, 942, 984
ApeKI GCWGC 2 cut(s) 624, 970
AspLEI GCGC 9 cut(s) 185, 281, 521, 619, 678, 734, 784, 955, 970
AspS9I GGNCC 5 cut(s) 141, 358, 481, 717, 840
AsuC2I CCSGG 1 cut(s) 668
AsuHPI GGTGA 3 cut(s) 151, 226, 820
AvaII GGWCC 2 cut(s) 717, 840
BanI GGYRCC 2 cut(s) 278, 518
BanII GRGCYC 1 cut(s) 231
BbsI GAAGAC 2 cut(s) 205, 968
BbvI GCAGC 2 cut(s) 611, 982
BccI CCATC 7 cut(s) 77, 281, 392, 452, 458, 470, 602
BceAI ACGGC 5 cut(s) 490, 506, 737, 901, 981
BciT130I CCWGG 3 cut(s) 496, 649, 890
BclI TGATCA 1 cut(s) 846
BcnI CCSGG 1 cut(s) 668
BcoDI GTCTC 2 cut(s) 340, 397
BfoI RGCGCY 3 cut(s) 282, 522, 785
BglI GCCNNNNNGGC 1 cut(s) 950
BisI GCNGC 3 cut(s) 468, 625, 971
BlsI GCNGC 3 cut(s) 469, 626, 972
Bme1390I CCNGG 4 cut(s) 496, 649, 668, 890
Bme18I GGWCC 2 cut(s) 717, 840
BmgT120I GGNCC 5 cut(s) 141, 358, 481, 717, 840
BmiI GGNNCC 5 cut(s) 16, 280, 520, 718, 821
BmrFI CCNGG 4 cut(s) 496, 649, 668, 890
BmsI GCATC 1 cut(s) 339
BpiI GAAGAC 2 cut(s) 205, 968
BpmI CTGGAG 2 cut(s) 494, 822
Bpu10I CCTNAGC 1 cut(s) 20
BpuEI CTTGAG 1 cut(s) 338
BpuMI CCSGG 1 cut(s) 668
BsaBI GATNNNNATC 2 cut(s) 443, 557
BsaHI GRCGYC 5 cut(s) 279, 390, 456, 501, 519
BsaJI CCNNGG 4 cut(s) 426, 495, 647, 777
BsaXI ACNNNNNCTCC 8 cut(s) 245, 275, 278, 308, 425, 455, 905, 935
Bsc4I CCNNNNNNNGG 1 cut(s) 837
Bse1I ACTGG 3 cut(s) 143, 821, 987
Bse8I GATNNNNATC 2 cut(s) 443, 557
BseBI CCWGG 3 cut(s) 496, 649, 890
BseDI CCNNGG 4 cut(s) 426, 495, 647, 777
BseGI GGATG 4 cut(s) 114, 342, 504, 569
BseJI GATNNNNATC 2 cut(s) 443, 557
BseLI CCNNNNNNNGG 1 cut(s) 837
BseMII CTCAG 1 cut(s) 11
BseNI ACTGG 3 cut(s) 143, 821, 987
BseRI GAGGAG 6 cut(s) 38, 191, 250, 554, 995, 1016
BseXI GCAGC 2 cut(s) 611, 982
Bsh1236I CGCG 4 cut(s) 210, 246, 617, 678
BshFI GGCC 8 cut(s) 142, 359, 482, 536, 752, 888, 944, 986
BshNI GGYRCC 2 cut(s) 278, 518
BsiSI CCGG 1 cut(s) 668
BslFI GGGAC 4 cut(s) 226, 254, 629, 730
BslI CCNNNNNNNGG 1 cut(s) 837
BsmAI GTCTC 2 cut(s) 340, 397
BsmBI CGTCTC 2 cut(s) 340, 397
BsmFI GGGAC 4 cut(s) 226, 254, 629, 730
BsnI GGCC 8 cut(s) 142, 359, 482, 536, 752, 888, 944, 986
Bsp1286I GDGCHC 1 cut(s) 231
Bsp1407I TGTACA 1 cut(s) 132
Bsp19I CCATGG 1 cut(s) 426
BspACI CCGC 6 cut(s) 208, 217, 244, 315, 468, 541
BspANI GGCC 8 cut(s) 142, 359, 482, 536, 752, 888, 944, 986
BspCNI CTCAG 1 cut(s) 12
BspFNI CGCG 4 cut(s) 210, 246, 617, 678
BspLI GGNNCC 5 cut(s) 16, 280, 520, 718, 821
BspPI GGATC 6 cut(s) 37, 83, 160, 547, 553, 659
BspT107I GGYRCC 2 cut(s) 278, 518
BsrGI TGTACA 1 cut(s) 132
BsrI ACTGG 3 cut(s) 143, 821, 987
BssECI CCNNGG 4 cut(s) 426, 495, 647, 777
BssNI GRCGYC 5 cut(s) 279, 390, 456, 501, 519
BssT1I CCWWGG 1 cut(s) 426
Bst2UI CCWGG 3 cut(s) 496, 649, 890
Bst4CI ACNGT 1 cut(s) 859
Bst6I CTCTTC 2 cut(s) 644, 1022
BstACI GRCGYC 5 cut(s) 279, 390, 456, 501, 519
BstAUI TGTACA 1 cut(s) 132
BstC8I GCNNGC 1 cut(s) 933
BstDEI CTNAG 1 cut(s) 20
BstDSI CCRYGG 1 cut(s) 426
BstF5I GGATG 4 cut(s) 114, 342, 504, 569
BstFNI CGCG 4 cut(s) 210, 246, 617, 678
BstH2I RGCGCY 3 cut(s) 282, 522, 785
BstHHI GCGC 9 cut(s) 185, 281, 521, 619, 678, 734, 784, 955, 970
BstMAI GTCTC 2 cut(s) 340, 397
BstMWI GCNNNNNNNGC 8 cut(s) 12, 21, 191, 216, 467, 533, 941, 950
BstNI CCWGG 3 cut(s) 496, 649, 890
BstNSI RCATGY 1 cut(s) 175
BstSCI CCNGG 4 cut(s) 494, 647, 666, 888
BstUI CGCG 4 cut(s) 210, 246, 617, 678
BstV1I GCAGC 2 cut(s) 611, 982
BstV2I GAAGAC 2 cut(s) 205, 968
BstX2I RGATCY 4 cut(s) 42, 75, 558, 651
BstYI RGATCY 4 cut(s) 42, 75, 558, 651
BsuRI GGCC 8 cut(s) 142, 359, 482, 536, 752, 888, 944, 986
BtgI CCRYGG 1 cut(s) 426
BtgZI GCGATG 1 cut(s) 448
BtsCI GGATG 4 cut(s) 114, 342, 504, 569
Cac8I GCNNGC 1 cut(s) 933
CaiI CAGNNNCTG 1 cut(s) 937
CfoI GCGC 9 cut(s) 185, 281, 521, 619, 678, 734, 784, 955, 970
Cfr13I GGNCC 5 cut(s) 141, 358, 481, 717, 840
CseI GACGC 5 cut(s) 82, 199, 379, 445, 490
Csp6I GTAC 2 cut(s) 133, 664
CspCI CAANNNNNGTGG 2 cut(s) 526, 561
CviAII CATG 7 cut(s) 163, 172, 238, 364, 427, 436, 997
CviQI GTAC 2 cut(s) 133, 664
DdeI CTNAG 1 cut(s) 20
DinI GGCGCC 2 cut(s) 280, 520
DrdI GACNNNNNNGTC 1 cut(s) 428
DseDI GACNNNNNNGTC 1 cut(s) 428
EaeI YGGCCR 1 cut(s) 750
Eam1104I CTCTTC 2 cut(s) 644, 1022
EarI CTCTTC 2 cut(s) 644, 1022
EciI GGCGGA 2 cut(s) 206, 304
Eco130I CCWWGG 1 cut(s) 426
Eco24I GRGCYC 1 cut(s) 231
Eco47I GGWCC 2 cut(s) 717, 840
Eco57I CTGAAG 2 cut(s) 73, 959
EcoO109I RGGNCCY 1 cut(s) 358
EcoRII CCWGG 3 cut(s) 494, 647, 888
EcoT14I CCWWGG 1 cut(s) 426
EcoT38I GRGCYC 1 cut(s) 231
EgeI GGCGCC 2 cut(s) 280, 520
EheI GGCGCC 2 cut(s) 280, 520
ErhI CCWWGG 1 cut(s) 426
Esp3I CGTCTC 2 cut(s) 340, 397
FaeI CATG 7 cut(s) 166, 175, 241, 367, 430, 439, 1000
FaiI YATR 8 cut(s) 63, 164, 173, 239, 365, 428, 437, 998
FaqI GGGAC 4 cut(s) 226, 254, 629, 730
FatI CATG 7 cut(s) 162, 171, 237, 363, 426, 435, 996
FauI CCCGC 2 cut(s) 251, 548
FbaI TGATCA 1 cut(s) 846
FblI GTMKAC 2 cut(s) 102, 378
Fnu4HI GCNGC 3 cut(s) 468, 625, 971
FokI GGATG 4 cut(s) 101, 329, 491, 556
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 3 cut(s) 468, 625, 971
FspI TGCGCA 1 cut(s) 733
GlaI GCGC 9 cut(s) 184, 280, 520, 618, 677, 733, 783, 954, 969
GluI GCNGC 3 cut(s) 468, 625, 971
GsuI CTGGAG 2 cut(s) 494, 822
HaeII RGCGCY 3 cut(s) 282, 522, 785
HaeIII GGCC 8 cut(s) 142, 359, 482, 536, 752, 888, 944, 986
HapII CCGG 1 cut(s) 668
HgaI GACGC 5 cut(s) 82, 199, 379, 445, 490
HhaI GCGC 9 cut(s) 185, 281, 521, 619, 678, 734, 784, 955, 970
Hin1I GRCGYC 5 cut(s) 279, 390, 456, 501, 519
Hin1II CATG 7 cut(s) 166, 175, 241, 367, 430, 439, 1000
Hin6I GCGC 9 cut(s) 183, 279, 519, 617, 676, 732, 782, 953, 968
HinP1I GCGC 9 cut(s) 183, 279, 519, 617, 676, 732, 782, 953, 968
HincII GTYRAC 1 cut(s) 433
HindII GTYRAC 1 cut(s) 433
HinfI GANTC 5 cut(s) 407, 486, 680, 745, 1037
HpaII CCGG 1 cut(s) 668
HphI GGTGA 3 cut(s) 151, 226, 820
Hpy166II GTNNAC 3 cut(s) 103, 379, 433
Hpy188I TCNGA 3 cut(s) 744, 770, 939
Hpy188III TCNNGA 7 cut(s) 73, 346, 415, 550, 556, 706, 823
Hpy8I GTNNAC 3 cut(s) 103, 379, 433
Hpy99I CGWCG 9 cut(s) 227, 269, 374, 461, 527, 617, 688, 770, 980
HpyCH4III ACNGT 1 cut(s) 859
HpyCH4IV ACGT 1 cut(s) 612
HpyCH4V TGCA 1 cut(s) 931
HpyF10VI GCNNNNNNNGC 8 cut(s) 12, 21, 191, 216, 467, 533, 941, 950
HpyF3I CTNAG 1 cut(s) 20
HpySE526I ACGT 1 cut(s) 612
Hsp92I GRCGYC 5 cut(s) 279, 390, 456, 501, 519
Hsp92II CATG 7 cut(s) 166, 175, 241, 367, 430, 439, 1000
HspAI GCGC 9 cut(s) 183, 279, 519, 617, 676, 732, 782, 953, 968
KasI GGCGCC 2 cut(s) 278, 518
Ksp22I TGATCA 1 cut(s) 846
LmnI GCTCC 2 cut(s) 20, 825
Lsp1109I GCAGC 2 cut(s) 611, 982
LweI GCATC 1 cut(s) 339
MaeII ACGT 1 cut(s) 612
MaeIII GTNAC 2 cut(s) 232, 859
MboII GAAGA 8 cut(s) 70, 139, 205, 631, 646, 970, 973, 1039
MflI RGATCY 4 cut(s) 42, 75, 558, 651
MhlI GDGCHC 1 cut(s) 231
MluCI AATT 4 cut(s) 721, 926, 1020, 1045
Mly113I GGCGCC 2 cut(s) 279, 519
MlyI GAGTC 1 cut(s) 416
MmeI TCCRAC 2 cut(s) 333, 748
MseI TTAA 1 cut(s) 588
MslI CAYNNNNRTG 1 cut(s) 347
MspI CCGG 1 cut(s) 668
MspR9I CCNGG 4 cut(s) 496, 649, 668, 890
MvaI CCWGG 3 cut(s) 496, 649, 890
MvnI CGCG 4 cut(s) 210, 246, 617, 678
MwoI GCNNNNNNNGC 8 cut(s) 12, 21, 191, 216, 467, 533, 941, 950
NarI GGCGCC 2 cut(s) 279, 519
NciI CCSGG 1 cut(s) 668
NcoI CCATGG 1 cut(s) 426
NlaIII CATG 7 cut(s) 166, 175, 241, 367, 430, 439, 1000
NlaIV GGNNCC 5 cut(s) 16, 280, 520, 718, 821
NmeAIII GCCGAG 3 cut(s) 495, 685, 758
NmuCI GTSAC 2 cut(s) 232, 859
NsbI TGCGCA 1 cut(s) 733
NspI RCATGY 1 cut(s) 175
PciI ACATGT 1 cut(s) 171
PcsI WCGNNNNNNNCGW 2 cut(s) 228, 785
PfeI GAWTC 4 cut(s) 486, 680, 745, 1037
PkrI GCNGC 3 cut(s) 469, 626, 972
PleI GAGTC 1 cut(s) 415
PluTI GGCGCC 2 cut(s) 282, 522
PpsI GAGTC 1 cut(s) 415
PscI ACATGT 1 cut(s) 171
Psp6I CCWGG 3 cut(s) 494, 647, 888
PspGI CCWGG 3 cut(s) 494, 647, 888
PspN4I GGNNCC 5 cut(s) 16, 280, 520, 718, 821
PspPI GGNCC 5 cut(s) 141, 358, 481, 717, 840
PstNI CAGNNNCTG 1 cut(s) 937
PsuI RGATCY 4 cut(s) 42, 75, 558, 651
RsaI GTAC 2 cut(s) 134, 665
RsaNI GTAC 2 cut(s) 133, 664
RseI CAYNNNNRTG 1 cut(s) 347
SaqAI TTAA 1 cut(s) 588
SatI GCNGC 3 cut(s) 468, 625, 971
Sau96I GGNCC 5 cut(s) 141, 358, 481, 717, 840
SchI GAGTC 1 cut(s) 416
ScrFI CCNGG 4 cut(s) 496, 649, 668, 890
SduI GDGCHC 1 cut(s) 231
SetI ASST 9 cut(s) 62, 252, 258, 330, 497, 516, 615, 692, 779
SfaNI GCATC 1 cut(s) 339
SfoI GGCGCC 2 cut(s) 280, 520
SinI GGWCC 2 cut(s) 717, 840
SmiMI CAYNNNNRTG 1 cut(s) 347
SmlI CTYRAG 1 cut(s) 353
SmoI CTYRAG 1 cut(s) 353
Sse9I AATT 4 cut(s) 721, 926, 1020, 1045
SsiI CCGC 6 cut(s) 208, 217, 244, 315, 468, 541
SspDI GGCGCC 2 cut(s) 278, 518
StyD4I CCNGG 4 cut(s) 494, 647, 666, 888
StyI CCWWGG 1 cut(s) 426
TaaI ACNGT 1 cut(s) 859
TaiI ACGT 1 cut(s) 615
TaqI TCGA 5 cut(s) 120, 225, 489, 686, 699
TaqII GACCGA 1 cut(s) 434
TasI AATT 4 cut(s) 721, 926, 1020, 1045
TatI WGTACW 1 cut(s) 132
TauI GCSGC 1 cut(s) 470
TfiI GAWTC 4 cut(s) 486, 680, 745, 1037
Tru1I TTAA 1 cut(s) 588
Tru9I TTAA 1 cut(s) 588
TseFI GTSAC 2 cut(s) 232, 859
TseI GCWGC 2 cut(s) 624, 970
Tsp45I GTSAC 2 cut(s) 232, 859
TspDTI ATGAA 2 cut(s) 331, 806
TspGWI ACGGA 3 cut(s) 253, 322, 832
VpaK11BI GGWCC 2 cut(s) 717, 840
XceI RCATGY 1 cut(s) 175
XcmI CCANNNNNNNNNTGG 1 cut(s) 994
XmiI GTMKAC 2 cut(s) 102, 378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.