Rh2AG011100

sugar phosphate phosphate translocator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0001025
Physical Location & Seq
Reverse (-)
884136 .. 884615
480 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG011100.1

Sequence Viewer

Length: 390 bp
ATGCTAAGGTTCCCCGTGTTGAAGGAGACTTTGAGTTTCCACTTTGATTTTGTCATTTTCGGGACGAATTTGCTCTGTGCTTTTGTGTTGAACCTGGCTGTGTTTCTGCTGGAGGGGAAGACTTTGGCTTTGACAATGAATGTTGCCGTGGTTGTGAAAAATTGGCACTTGATTACGTTTTCGTGGTCGGTGATCAAGGATACCATGACGCCAATCAATCTGATTGGGTATCTGATTGCGTTTATCTGTGTGGCTTATTACAATCATGCAAAATTGCAGGCGCTTAAGGCCACCAAGGCACAGAAGAAGGCTCAACAGGACAATGTAGAGGCTGGGAAGCTGTTGGAGGAGAGAGATGAGGATGCAAAGAAGAACGAAACTCAGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPT

Protein Analysis

129

Amino Acids

14.65

Weight (kDa)

7.77

Isoelectric Point (pI)

18.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 67
AcyI GRCGYC 1 cut(s) 209
AflII CTTAAG 1 cut(s) 284
AgsI TTSAA 2 cut(s) 22, 91
AjnI CCWGG 1 cut(s) 93
AluBI AGCT 1 cut(s) 340
AluI AGCT 1 cut(s) 340
Alw26I GTCTC 1 cut(s) 20
AoxI GGCC 1 cut(s) 288
ApoI RAATTY 1 cut(s) 67
ArsI GACNNNNNNTTYG 2 cut(s) 112, 144
AspLEI GCGC 1 cut(s) 283
AsuHPI GGTGA 1 cut(s) 202
BbsI GAAGAC 1 cut(s) 125
BceAI ACGGC 1 cut(s) 131
BciT130I CCWGG 1 cut(s) 95
BciVI GTATCC 1 cut(s) 193
BclI TGATCA 1 cut(s) 192
BcoDI GTCTC 1 cut(s) 20
BfoI RGCGCY 1 cut(s) 284
BfrI CTTAAG 1 cut(s) 284
BfuI GTATCC 1 cut(s) 193
BglI GCCNNNNNGGC 1 cut(s) 296
Bme1390I CCNGG 1 cut(s) 95
BmiI GGNNCC 1 cut(s) 11
BmrFI CCNGG 1 cut(s) 95
BmsI GCATC 1 cut(s) 352
BpiI GAAGAC 1 cut(s) 125
BpmI CTGGAG 1 cut(s) 131
Bpu10I CCTNAGC 1 cut(s) 5
BsaHI GRCGYC 1 cut(s) 209
BsaJI CCNNGG 2 cut(s) 147, 294
BseBI CCWGG 1 cut(s) 95
BseDI CCNNGG 2 cut(s) 147, 294
BseGI GGATG 1 cut(s) 367
BseRI GAGGAG 1 cut(s) 362
BseYI CCCAGC 1 cut(s) 332
BshFI GGCC 1 cut(s) 290
BslFI GGGAC 1 cut(s) 76
BsmAI GTCTC 1 cut(s) 20
BsmFI GGGAC 1 cut(s) 76
BsnI GGCC 1 cut(s) 290
Bsp143I GATC 1 cut(s) 192
BspANI GGCC 1 cut(s) 290
BspLI GGNNCC 1 cut(s) 11
BspTI CTTAAG 1 cut(s) 284
BssECI CCNNGG 2 cut(s) 147, 294
BssMI GATC 1 cut(s) 192
BssNI GRCGYC 1 cut(s) 209
BssT1I CCWWGG 1 cut(s) 294
Bst2UI CCWGG 1 cut(s) 95
BstACI GRCGYC 1 cut(s) 209
BstAFI CTTAAG 1 cut(s) 284
BstC8I GCNNGC 1 cut(s) 279
BstDEI CTNAG 2 cut(s) 5, 381
BstDSI CCRYGG 1 cut(s) 147
BstF5I GGATG 1 cut(s) 367
BstH2I RGCGCY 1 cut(s) 284
BstHHI GCGC 1 cut(s) 283
BstKTI GATC 1 cut(s) 195
BstMAI GTCTC 1 cut(s) 20
BstMBI GATC 1 cut(s) 192
BstMWI GCNNNNNNNGC 2 cut(s) 287, 296
BstNI CCWGG 1 cut(s) 95
BstSCI CCNGG 1 cut(s) 93
BstV2I GAAGAC 1 cut(s) 125
BsuI GTATCC 1 cut(s) 193
BsuRI GGCC 1 cut(s) 290
BtgI CCRYGG 1 cut(s) 147
BtsCI GGATG 1 cut(s) 367
Cac8I GCNNGC 1 cut(s) 279
CfoI GCGC 1 cut(s) 283
CseI GACGC 1 cut(s) 217
CviAII CATG 2 cut(s) 205, 266
CviJI RGCY 7 cut(s) 98, 128, 254, 290, 311, 332, 340
CviKI_1 RGCY 7 cut(s) 98, 128, 254, 290, 311, 332, 340
DdeI CTNAG 2 cut(s) 5, 381
DpnI GATC 1 cut(s) 194
DpnII GATC 1 cut(s) 192
Eco130I CCWWGG 1 cut(s) 294
EcoRII CCWGG 1 cut(s) 93
EcoT14I CCWWGG 1 cut(s) 294
ErhI CCWWGG 1 cut(s) 294
FaeI CATG 2 cut(s) 208, 269
FaiI YATR 2 cut(s) 206, 267
FaqI GGGAC 1 cut(s) 76
FatI CATG 2 cut(s) 204, 265
FbaI TGATCA 1 cut(s) 192
FokI GGATG 1 cut(s) 374
GlaI GCGC 1 cut(s) 282
GsaI CCCAGC 1 cut(s) 336
GsuI CTGGAG 1 cut(s) 131
HaeII RGCGCY 1 cut(s) 284
HaeIII GGCC 1 cut(s) 290
HgaI GACGC 1 cut(s) 217
HhaI GCGC 1 cut(s) 283
Hin1I GRCGYC 1 cut(s) 209
Hin1II CATG 2 cut(s) 208, 269
Hin6I GCGC 1 cut(s) 281
HinP1I GCGC 1 cut(s) 281
HphI GGTGA 1 cut(s) 202
Hpy188I TCNGA 2 cut(s) 222, 234
Hpy188III TCNNGA 2 cut(s) 61, 383
HpyAV CCTTC 2 cut(s) 16, 301
HpyCH4IV ACGT 1 cut(s) 176
HpyCH4V TGCA 3 cut(s) 269, 277, 365
HpyF10VI GCNNNNNNNGC 2 cut(s) 287, 296
HpyF3I CTNAG 2 cut(s) 5, 381
HpySE526I ACGT 1 cut(s) 176
Hsp92I GRCGYC 1 cut(s) 209
Hsp92II CATG 2 cut(s) 208, 269
HspAI GCGC 1 cut(s) 281
Ksp22I TGATCA 1 cut(s) 192
Kzo9I GATC 1 cut(s) 192
LpnPI CCDG 7 cut(s) 80, 95, 107, 263, 302, 318, 368
LweI GCATC 1 cut(s) 352
MaeII ACGT 1 cut(s) 176
MalI GATC 1 cut(s) 194
MboI GATC 1 cut(s) 192
MboII GAAGA 3 cut(s) 130, 316, 382
MluCI AATT 3 cut(s) 67, 160, 272
MmeI TCCRAC 1 cut(s) 324
MnlI CCTC 4 cut(s) 106, 322, 340, 352
MseI TTAA 1 cut(s) 285
MspCI CTTAAG 1 cut(s) 284
MspR9I CCNGG 1 cut(s) 95
MvaI CCWGG 1 cut(s) 95
MwoI GCNNNNNNNGC 2 cut(s) 287, 296
NdeII GATC 1 cut(s) 192
NlaIII CATG 2 cut(s) 208, 269
NlaIV GGNNCC 1 cut(s) 11
Psp6I CCWGG 1 cut(s) 93
PspFI CCCAGC 1 cut(s) 332
PspGI CCWGG 1 cut(s) 93
PspN4I GGNNCC 1 cut(s) 11
SaqAI TTAA 1 cut(s) 285
Sau3AI GATC 1 cut(s) 192
ScrFI CCNGG 1 cut(s) 95
SetI ASST 4 cut(s) 11, 96, 179, 342
SfaNI GCATC 1 cut(s) 352
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
Sse9I AATT 3 cut(s) 67, 160, 272
StyD4I CCNGG 1 cut(s) 93
StyI CCWWGG 1 cut(s) 294
TaiI ACGT 1 cut(s) 179
TasI AATT 3 cut(s) 67, 160, 272
Tru1I TTAA 1 cut(s) 285
Tru9I TTAA 1 cut(s) 285
TspDTI ATGAA 1 cut(s) 152
Vha464I CTTAAG 1 cut(s) 284
XapI RAATTY 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.