Rmu_co8046638.1_g000001

sugar phosphate phosphate translocator

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8046638.1
Physical Location & Seq
Forward (+)
1 .. 390
390 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8046638.1_g000001.1.cds

Sequence Viewer

Length: 390 bp
ttgatccaaatcttgttgacatctaaagggatcaccttgaatcccattacctctttgtactatgtggctccttgttgcttgacttttctgttggtgccttggatctatgtggagtacccaacactgagggacacctcgagtttccatttcgattacttgattttcgggaccaattccttcggtgcgttcgctttgaatcttgctgtgttcttgcttgtggggaagacctcggctttgacgatgaatgtggcgggtgtggtgaaagattggctcttgattgccttctcttggtctgtgatcaaggacattctgaccccaatcaatctggtgggttatggactaacactcgaaattgcagtgatcaaatatctaacaagctatcgcagatga

Protein Analysis

129

Amino Acids

14.45

Weight (kDa)

8.6

Isoelectric Point (pI)

18.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 94
AciI CCGC 1 cut(s) 251
AclWI GGATC 2 cut(s) 38, 110
AfaI GTAC 2 cut(s) 59, 116
AfiI CCNNNNNNNGG 1 cut(s) 288
AgsI TTSAA 2 cut(s) 40, 196
AluBI AGCT 1 cut(s) 378
AluI AGCT 1 cut(s) 378
AlwI GGATC 2 cut(s) 38, 110
Ama87I CYCGRG 1 cut(s) 136
ArsI GACNNNNNNTTYG 2 cut(s) 217, 249
AspS9I GGNCC 1 cut(s) 168
AsuHPI GGTGA 2 cut(s) 25, 271
AvaI CYCGRG 1 cut(s) 136
AvaII GGWCC 1 cut(s) 168
BanI GGYRCC 1 cut(s) 94
BbsI GAAGAC 1 cut(s) 230
BclI TGATCA 2 cut(s) 297, 360
Bme18I GGWCC 1 cut(s) 168
BmeT110I CYCGRG 1 cut(s) 136
BmgT120I GGNCC 1 cut(s) 168
BmiI GGNNCC 3 cut(s) 69, 96, 169
BpiI GAAGAC 1 cut(s) 230
BsaBI GATNNNNATC 1 cut(s) 8
BsaJI CCNNGG 2 cut(s) 98, 228
Bsc4I CCNNNNNNNGG 1 cut(s) 288
Bse8I GATNNNNATC 1 cut(s) 8
BseDI CCNNGG 2 cut(s) 98, 228
BseJI GATNNNNATC 1 cut(s) 8
BseLI CCNNNNNNNGG 1 cut(s) 288
BseMII CTCAG 1 cut(s) 116
BshNI GGYRCC 1 cut(s) 94
BsiHKCI CYCGRG 1 cut(s) 136
BslFI GGGAC 2 cut(s) 143, 181
BslI CCNNNNNNNGG 1 cut(s) 288
BsmFI GGGAC 2 cut(s) 143, 181
BsoBI CYCGRG 1 cut(s) 136
Bsp143I GATC 5 cut(s) 3, 30, 102, 297, 360
BspACI CCGC 1 cut(s) 251
BspCNI CTCAG 1 cut(s) 117
BspLI GGNNCC 3 cut(s) 69, 96, 169
BspPI GGATC 2 cut(s) 38, 110
BspT107I GGYRCC 1 cut(s) 94
BssECI CCNNGG 2 cut(s) 98, 228
BssMI GATC 5 cut(s) 3, 30, 102, 297, 360
BssT1I CCWWGG 1 cut(s) 98
BstDEI CTNAG 1 cut(s) 125
BstKTI GATC 5 cut(s) 6, 33, 105, 300, 363
BstMBI GATC 5 cut(s) 3, 30, 102, 297, 360
BstV2I GAAGAC 1 cut(s) 230
BstX2I RGATCY 1 cut(s) 102
BstYI RGATCY 1 cut(s) 102
BtsI GCAGTG 1 cut(s) 363
BtsIMutI CAGTG 2 cut(s) 122, 363
Cfr13I GGNCC 1 cut(s) 168
Csp6I GTAC 2 cut(s) 58, 115
CviJI RGCY 4 cut(s) 68, 233, 271, 378
CviKI_1 RGCY 4 cut(s) 68, 233, 271, 378
CviQI GTAC 2 cut(s) 58, 115
DdeI CTNAG 1 cut(s) 125
DpnI GATC 5 cut(s) 5, 32, 104, 299, 362
DpnII GATC 5 cut(s) 3, 30, 102, 297, 360
Eco130I CCWWGG 1 cut(s) 98
Eco47I GGWCC 1 cut(s) 168
Eco88I CYCGRG 1 cut(s) 136
EcoT14I CCWWGG 1 cut(s) 98
ErhI CCWWGG 1 cut(s) 98
FaiI YATR 3 cut(s) 63, 108, 336
FaqI GGGAC 2 cut(s) 143, 181
FauI CCCGC 1 cut(s) 244
FbaI TGATCA 2 cut(s) 297, 360
HincII GTYRAC 1 cut(s) 18
HindII GTYRAC 1 cut(s) 18
HinfI GANTC 2 cut(s) 40, 196
HphI GGTGA 2 cut(s) 25, 271
Hpy166II GTNNAC 1 cut(s) 18
Hpy188I TCNGA 1 cut(s) 312
Hpy188III TCNNGA 2 cut(s) 166, 274
Hpy8I GTNNAC 1 cut(s) 18
HpyAV CCTTC 2 cut(s) 187, 292
HpyCH4V TGCA 1 cut(s) 356
HpyF3I CTNAG 1 cut(s) 125
Ksp22I TGATCA 2 cut(s) 297, 360
Kzo9I GATC 5 cut(s) 3, 30, 102, 297, 360
LmnI GCTCC 1 cut(s) 73
LpnPI CCDG 1 cut(s) 311
MalI GATC 5 cut(s) 5, 32, 104, 299, 362
MboI GATC 5 cut(s) 3, 30, 102, 297, 360
MboII GAAGA 1 cut(s) 235
MflI RGATCY 1 cut(s) 102
MluCI AATT 2 cut(s) 172, 351
MnlI CCTC 4 cut(s) 61, 120, 145, 238
NdeII GATC 5 cut(s) 3, 30, 102, 297, 360
NlaIV GGNNCC 3 cut(s) 69, 96, 169
NmeAIII GCCGAG 1 cut(s) 209
PaeR7I CTCGAG 1 cut(s) 136
PcsI WCGNNNNNNNCGW 1 cut(s) 236
PfeI GAWTC 2 cut(s) 40, 196
PspN4I GGNNCC 3 cut(s) 69, 96, 169
PspPI GGNCC 1 cut(s) 168
PspXI VCTCGAGB 1 cut(s) 136
PsuI RGATCY 1 cut(s) 102
RsaI GTAC 2 cut(s) 59, 116
RsaNI GTAC 2 cut(s) 58, 115
Sau3AI GATC 5 cut(s) 3, 30, 102, 297, 360
Sau96I GGNCC 1 cut(s) 168
SetI ASST 5 cut(s) 38, 53, 137, 230, 380
Sfr274I CTCGAG 1 cut(s) 136
SinI GGWCC 1 cut(s) 168
SlaI CTCGAG 1 cut(s) 136
SmlI CTYRAG 1 cut(s) 136
SmoI CTYRAG 1 cut(s) 136
Sse9I AATT 2 cut(s) 172, 351
SsiI CCGC 1 cut(s) 251
StyI CCWWGG 1 cut(s) 98
TaqI TCGA 3 cut(s) 137, 150, 348
TasI AATT 2 cut(s) 172, 351
TatI WGTACW 1 cut(s) 57
TfiI GAWTC 2 cut(s) 40, 196
TscAI CASTG 2 cut(s) 129, 363
TspDTI ATGAA 1 cut(s) 257
TspRI CASTG 2 cut(s) 129, 363
VpaK11BI GGWCC 1 cut(s) 168
XhoI CTCGAG 1 cut(s) 136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.