Rh2AG040600

sugar phosphate phosphate translocator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0001025
Physical Location & Seq
Forward (+)
3202617 .. 3203423
807 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG040600.1

Sequence Viewer

Length: 807 bp
ATGTCAAGGGATCTCTACCTCAAGTCCGTCGTCCCCATCGGAGCTCTGTACGCTCTGTCCCTCTGGTTCTCCAACTCCGCTTACATCTTTCTGTCCGTCTCTTTCATTCAGATGCTCAAGGCTCTAATGCCGGTGGCCGTCTACTCGATCGGGATTCTCATCAAGAAGGACCCTTTCAAATCGGATACCATGGTCAACATGCTCTCGATCTCGTTCGGCGTGGCGGTTGCGGCTTACGGCGAGGCGAAATTCAACTCGTGGGGAGTGAGCCTGCAGCTACTGGCGGTGGGTTTCGAGGCGACGAGGTTGGTTCTGATTCAGATCCTGCTTAATGCTAAGGGTATTAGCTTGAATCCGATTACTTCTCTTTATTATGTTGCCCCCTGTTGCTTTGCGTTCCTGTGCATTCCTTGGATCATTGTGGAGTTCCCCGTGTTGAGGGAGACTTCGAGTTTCCACTTTGATTTCGTCATTTTCGGGACGAATTCCCTCTGTGCGTTTGCGTTGAACCTGGCTGTGTTTCTGCTGGTGGGGAAGACCTCGGCTTTGACCATGAATGTTGCCGGGGTTGTGAAAGATTGGCTCTTGATTGCGTTTTCGTGGTCGGTGATCAAGGATACCGTGACGCCAATCAATCTGATTGGGTATCTGATTGCGTTTATCGGTGTGGCCTATTACAATCATGCCAAATTGCAGGCGCTTAAGGCCGCCGAGGCGCAGAAGAAGGCTCAGCAGGACAATGTGGAGGCTGGGAAGCTGTTGGAGGAGAGAGATGAGGATGGAAAGAAGAACGAAACTCAGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPT

Protein Analysis

268

Amino Acids

29.54

Weight (kDa)

7.6

Isoelectric Point (pI)

19.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPT PF03151 6 - 227 8.3e-17 Triose-phosphate Transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 141
AciI CCGC 5 cut(s) 78, 224, 230, 284, 708
AclWI GGATC 3 cut(s) 18, 316, 422
AcoI YGGCCR 1 cut(s) 135
AcsI RAATTY 2 cut(s) 248, 484
AcyI GRCGYC 1 cut(s) 626
AfaI GTAC 1 cut(s) 50
AfiI CCNNNNNNNGG 1 cut(s) 438
AflII CTTAAG 1 cut(s) 701
AgsI TTSAA 4 cut(s) 178, 253, 352, 508
AjnI CCWGG 1 cut(s) 510
AluBI AGCT 4 cut(s) 44, 277, 348, 757
AluI AGCT 4 cut(s) 44, 277, 348, 757
Alw21I GWGCWC 1 cut(s) 46
Alw26I GTCTC 2 cut(s) 103, 437
AlwI GGATC 3 cut(s) 18, 316, 422
AlwNI CAGNNNCTG 2 cut(s) 280, 325
AoxI GGCC 3 cut(s) 135, 669, 705
ApeKI GCWGC 1 cut(s) 274
ApoI RAATTY 2 cut(s) 248, 484
ArsI GACNNNNNNTTYG 2 cut(s) 529, 561
AspLEI GCGC 2 cut(s) 700, 718
AspS9I GGNCC 1 cut(s) 169
AsuC2I CCSGG 1 cut(s) 565
AsuHPI GGTGA 1 cut(s) 619
AvaII GGWCC 1 cut(s) 169
BaeI ACNNNNGTAYC 2 cut(s) 177, 210
BanII GRGCYC 1 cut(s) 46
BauI CACGAG 1 cut(s) 256
BbsI GAAGAC 1 cut(s) 542
Bbv12I GWGCWC 1 cut(s) 46
BbvI GCAGC 1 cut(s) 286
BccI CCATC 2 cut(s) 44, 773
BceAI ACGGC 2 cut(s) 122, 253
BciT130I CCWGG 1 cut(s) 512
BciVI GTATCC 2 cut(s) 178, 610
BclI TGATCA 1 cut(s) 609
BcnI CCSGG 1 cut(s) 565
BcoDI GTCTC 2 cut(s) 103, 437
BfmI CTRYAG 1 cut(s) 272
BfoI RGCGCY 1 cut(s) 701
BfrI CTTAAG 1 cut(s) 701
BfuI GTATCC 2 cut(s) 178, 610
BglI GCCNNNNNGGC 1 cut(s) 713
BisI GCNGC 3 cut(s) 231, 275, 708
BlpI GCTNAGC 1 cut(s) 729
BlsI GCNGC 3 cut(s) 232, 276, 709
Bme1390I CCNGG 2 cut(s) 512, 565
Bme18I GGWCC 1 cut(s) 169
BmgT120I GGNCC 1 cut(s) 169
BmiI GGNNCC 1 cut(s) 171
BmrFI CCNGG 2 cut(s) 512, 565
BmsI GCATC 1 cut(s) 102
BpiI GAAGAC 1 cut(s) 542
Bpu10I CCTNAGC 1 cut(s) 336
Bpu1102I GCTNAGC 1 cut(s) 729
BpuEI CTTGAG 2 cut(s) 5, 101
BpuMI CCSGG 1 cut(s) 565
BsaBI GATNNNNATC 2 cut(s) 158, 320
BsaHI GRCGYC 1 cut(s) 626
BsaJI CCNNGG 5 cut(s) 189, 410, 540, 564, 711
Bsc4I CCNNNNNNNGG 1 cut(s) 438
Bse118I RCCGGY 1 cut(s) 130
Bse1I ACTGG 1 cut(s) 285
Bse8I GATNNNNATC 2 cut(s) 158, 320
BseBI CCWGG 1 cut(s) 512
BseDI CCNNGG 5 cut(s) 189, 410, 540, 564, 711
BseGI GGATG 1 cut(s) 784
BseJI GATNNNNATC 2 cut(s) 158, 320
BseLI CCNNNNNNNGG 1 cut(s) 438
BseMII CTCAG 1 cut(s) 743
BseNI ACTGG 1 cut(s) 285
BseRI GAGGAG 1 cut(s) 779
BseXI GCAGC 1 cut(s) 286
BseYI CCCAGC 1 cut(s) 749
Bsh1285I CGRYCG 1 cut(s) 150
BshFI GGCC 3 cut(s) 137, 671, 707
BsiEI CGRYCG 1 cut(s) 150
BsiHKAI GWGCWC 1 cut(s) 46
BsiSI CCGG 2 cut(s) 131, 564
BslFI GGGAC 3 cut(s) 17, 43, 493
BslI CCNNNNNNNGG 1 cut(s) 438
BsmAI GTCTC 2 cut(s) 103, 437
BsmBI CGTCTC 1 cut(s) 103
BsmFI GGGAC 3 cut(s) 17, 43, 493
BsmI GAATGC 1 cut(s) 405
BsnI GGCC 3 cut(s) 137, 671, 707
Bsp1286I GDGCHC 1 cut(s) 46
Bsp143I GATC 6 cut(s) 10, 147, 207, 321, 414, 609
Bsp1720I GCTNAGC 1 cut(s) 729
Bsp19I CCATGG 1 cut(s) 189
BspACI CCGC 5 cut(s) 78, 224, 230, 284, 708
BspANI GGCC 3 cut(s) 137, 671, 707
BspCNI CTCAG 1 cut(s) 742
BspLI GGNNCC 1 cut(s) 171
BspMAI CTGCAG 1 cut(s) 276
BspPI GGATC 3 cut(s) 18, 316, 422
BspTI CTTAAG 1 cut(s) 701
BsrFI RCCGGY 1 cut(s) 130
BsrI ACTGG 1 cut(s) 285
BssAI RCCGGY 1 cut(s) 130
BssECI CCNNGG 5 cut(s) 189, 410, 540, 564, 711
BssMI GATC 6 cut(s) 10, 147, 207, 321, 414, 609
BssNI GRCGYC 1 cut(s) 626
BssSI CACGAG 1 cut(s) 256
BssT1I CCWWGG 2 cut(s) 189, 410
Bst2BI CACGAG 1 cut(s) 256
Bst2UI CCWGG 1 cut(s) 512
Bst4CI ACNGT 1 cut(s) 622
BstACI GRCGYC 1 cut(s) 626
BstAFI CTTAAG 1 cut(s) 701
BstC8I GCNNGC 2 cut(s) 272, 696
BstDEI CTNAG 3 cut(s) 336, 729, 798
BstDSI CCRYGG 1 cut(s) 189
BstF5I GGATG 1 cut(s) 784
BstH2I RGCGCY 1 cut(s) 701
BstHHI GCGC 2 cut(s) 700, 718
BstKTI GATC 6 cut(s) 13, 150, 210, 324, 417, 612
BstMAI GTCTC 2 cut(s) 103, 437
BstMBI GATC 6 cut(s) 10, 147, 207, 321, 414, 609
BstMCI CGRYCG 1 cut(s) 150
BstMWI GCNNNNNNNGC 4 cut(s) 50, 230, 704, 713
BstNI CCWGG 1 cut(s) 512
BstNSI RCATGY 1 cut(s) 202
BstSCI CCNGG 2 cut(s) 510, 563
BstSFI CTRYAG 1 cut(s) 272
BstV1I GCAGC 1 cut(s) 286
BstV2I GAAGAC 1 cut(s) 542
BstX2I RGATCY 2 cut(s) 10, 321
BstYI RGATCY 2 cut(s) 10, 321
BsuI GTATCC 2 cut(s) 178, 610
BsuRI GGCC 3 cut(s) 137, 671, 707
BtgI CCRYGG 1 cut(s) 189
BtsCI GGATG 1 cut(s) 784
Cac8I GCNNGC 2 cut(s) 272, 696
CaiI CAGNNNCTG 2 cut(s) 280, 325
CfoI GCGC 2 cut(s) 700, 718
Cfr10I RCCGGY 1 cut(s) 130
Cfr13I GGNCC 1 cut(s) 169
CseI GACGC 1 cut(s) 634
Csp6I GTAC 1 cut(s) 49
CviAII CATG 4 cut(s) 190, 199, 553, 683
CviQI GTAC 1 cut(s) 49
DdeI CTNAG 3 cut(s) 336, 729, 798
DpnI GATC 6 cut(s) 12, 149, 209, 323, 416, 611
DpnII GATC 6 cut(s) 10, 147, 207, 321, 414, 609
EaeI YGGCCR 1 cut(s) 135
Ecl136II GAGCTC 1 cut(s) 44
Eco130I CCWWGG 2 cut(s) 189, 410
Eco24I GRGCYC 1 cut(s) 46
Eco47I GGWCC 1 cut(s) 169
Eco53kI GAGCTC 1 cut(s) 44
EcoICRI GAGCTC 1 cut(s) 44
EcoO109I RGGNCCY 1 cut(s) 169
EcoRI GAATTC 1 cut(s) 484
EcoRII CCWGG 1 cut(s) 510
EcoT14I CCWWGG 2 cut(s) 189, 410
EcoT38I GRGCYC 1 cut(s) 46
ErhI CCWWGG 2 cut(s) 189, 410
Esp3I CGTCTC 1 cut(s) 103
FaeI CATG 4 cut(s) 193, 202, 556, 686
FaiI YATR 5 cut(s) 191, 200, 375, 554, 684
FaqI GGGAC 3 cut(s) 17, 43, 493
FatI CATG 4 cut(s) 189, 198, 552, 682
FbaI TGATCA 1 cut(s) 609
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 3 cut(s) 231, 275, 708
FokI GGATG 1 cut(s) 791
FriOI GRGCYC 1 cut(s) 46
Fsp4HI GCNGC 3 cut(s) 231, 275, 708
GlaI GCGC 2 cut(s) 699, 717
GluI GCNGC 3 cut(s) 231, 275, 708
GsaI CCCAGC 1 cut(s) 753
HaeII RGCGCY 1 cut(s) 701
HaeIII GGCC 3 cut(s) 137, 671, 707
HapII CCGG 2 cut(s) 131, 564
HgaI GACGC 1 cut(s) 634
HhaI GCGC 2 cut(s) 700, 718
Hin1I GRCGYC 1 cut(s) 626
Hin1II CATG 4 cut(s) 193, 202, 556, 686
Hin6I GCGC 2 cut(s) 698, 716
HinP1I GCGC 2 cut(s) 698, 716
HincII GTYRAC 1 cut(s) 196
HindII GTYRAC 1 cut(s) 196
HinfI GANTC 3 cut(s) 154, 316, 352
HpaII CCGG 2 cut(s) 131, 564
HphI GGTGA 1 cut(s) 619
Hpy166II GTNNAC 2 cut(s) 142, 196
Hpy188I TCNGA 8 cut(s) 41, 111, 184, 315, 321, 357, 639, 651
Hpy188III TCNNGA 6 cut(s) 151, 163, 205, 478, 586, 800
Hpy8I GTNNAC 2 cut(s) 142, 196
Hpy99I CGWCG 2 cut(s) 32, 304
HpyAV CCTTC 2 cut(s) 160, 718
HpyCH4III ACNGT 1 cut(s) 622
HpyCH4V TGCA 3 cut(s) 274, 405, 694
HpyF10VI GCNNNNNNNGC 4 cut(s) 50, 230, 704, 713
HpyF3I CTNAG 3 cut(s) 336, 729, 798
Hsp92I GRCGYC 1 cut(s) 626
Hsp92II CATG 4 cut(s) 193, 202, 556, 686
HspAI GCGC 2 cut(s) 698, 716
Ksp22I TGATCA 1 cut(s) 609
Kzo9I GATC 6 cut(s) 10, 147, 207, 321, 414, 609
LmnI GCTCC 1 cut(s) 41
Lsp1109I GCAGC 1 cut(s) 286
LweI GCATC 1 cut(s) 102
MaeIII GTNAC 1 cut(s) 622
MalI GATC 6 cut(s) 12, 149, 209, 323, 416, 611
MboI GATC 6 cut(s) 10, 147, 207, 321, 414, 609
MboII GAAGA 3 cut(s) 547, 733, 799
MflI RGATCY 2 cut(s) 10, 321
MhlI GDGCHC 1 cut(s) 46
MluCI AATT 3 cut(s) 248, 484, 689
MmeI TCCRAC 2 cut(s) 96, 741
MseI TTAA 2 cut(s) 330, 702
MslI CAYNNNNRTG 1 cut(s) 110
MspCI CTTAAG 1 cut(s) 701
MspI CCGG 2 cut(s) 131, 564
MspR9I CCNGG 2 cut(s) 512, 565
Mva1269I GAATGC 1 cut(s) 405
MvaI CCWGG 1 cut(s) 512
MwoI GCNNNNNNNGC 4 cut(s) 50, 230, 704, 713
NciI CCSGG 1 cut(s) 565
NcoI CCATGG 1 cut(s) 189
NdeII GATC 6 cut(s) 10, 147, 207, 321, 414, 609
NlaIII CATG 4 cut(s) 193, 202, 556, 686
NlaIV GGNNCC 1 cut(s) 171
NmeAIII GCCGAG 2 cut(s) 521, 736
NmuCI GTSAC 1 cut(s) 622
NspI RCATGY 1 cut(s) 202
PctI GAATGC 1 cut(s) 405
PfeI GAWTC 3 cut(s) 154, 316, 352
PkrI GCNGC 3 cut(s) 232, 276, 709
Ple19I CGATCG 1 cut(s) 150
PpuMI RGGWCCY 1 cut(s) 169
Psp124BI GAGCTC 1 cut(s) 46
Psp5II RGGWCCY 1 cut(s) 169
Psp6I CCWGG 1 cut(s) 510
PspFI CCCAGC 1 cut(s) 749
PspGI CCWGG 1 cut(s) 510
PspN4I GGNNCC 1 cut(s) 171
PspPI GGNCC 1 cut(s) 169
PspPPI RGGWCCY 1 cut(s) 169
PstI CTGCAG 1 cut(s) 276
PstNI CAGNNNCTG 2 cut(s) 280, 325
PsuI RGATCY 2 cut(s) 10, 321
PvuI CGATCG 1 cut(s) 150
RsaI GTAC 1 cut(s) 50
RsaNI GTAC 1 cut(s) 49
RseI CAYNNNNRTG 1 cut(s) 110
SacI GAGCTC 1 cut(s) 46
SaqAI TTAA 2 cut(s) 330, 702
SatI GCNGC 3 cut(s) 231, 275, 708
Sau3AI GATC 6 cut(s) 10, 147, 207, 321, 414, 609
Sau96I GGNCC 1 cut(s) 169
ScrFI CCNGG 2 cut(s) 512, 565
SduI GDGCHC 1 cut(s) 46
SetI ASST 8 cut(s) 21, 46, 279, 308, 350, 513, 542, 759
SfaNI GCATC 1 cut(s) 102
SfcI CTRYAG 1 cut(s) 272
SinI GGWCC 1 cut(s) 169
SmiMI CAYNNNNRTG 1 cut(s) 110
SmlI CTYRAG 3 cut(s) 20, 116, 701
SmoI CTYRAG 3 cut(s) 20, 116, 701
Sse9I AATT 3 cut(s) 248, 484, 689
SsiI CCGC 5 cut(s) 78, 224, 230, 284, 708
SstI GAGCTC 1 cut(s) 46
StyD4I CCNGG 2 cut(s) 510, 563
StyI CCWWGG 2 cut(s) 189, 410
TaaI ACNGT 1 cut(s) 622
TaqI TCGA 4 cut(s) 146, 206, 294, 449
TasI AATT 3 cut(s) 248, 484, 689
TauI GCSGC 2 cut(s) 233, 710
TfiI GAWTC 3 cut(s) 154, 316, 352
Tru1I TTAA 2 cut(s) 330, 702
Tru9I TTAA 2 cut(s) 330, 702
TseFI GTSAC 1 cut(s) 622
TseI GCWGC 1 cut(s) 274
Tsp45I GTSAC 1 cut(s) 622
TspDTI ATGAA 2 cut(s) 94, 569
TspGWI ACGGA 2 cut(s) 16, 85
Vha464I CTTAAG 1 cut(s) 701
VpaK11BI GGWCC 1 cut(s) 169
XapI RAATTY 2 cut(s) 248, 484
XceI RCATGY 1 cut(s) 202
XmiI GTMKAC 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.