Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0000642

Physical Location & Seq

Genomic Coordinates Forward (+)

2271296 .. 2274954

Gene Structure 3659 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1031900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGGAAGAGAGCTTGCTATTGCCAAAATACAGAGAAGAGCAACGAAGAAGCAGTAGAAATTCAAGTAGTAGTAGTAGTTGTCTAACATGGGTTTCTTTTTATGAAGAAGTAAAGAGGTTGGGATGCATAGCAGGACCAATGGTTGCTGTGGTTCTATCCCAGTACATGCTGCGGTTTATTTCAATGATAATGGTTGGCCACCTGGGTGAACTTGCTCTCTCCAGCTCCTCCATAGCCATCTCCCTCGCCGGCGCCACTGGCTTCAGTCTTTTCTTGGGAATGGCAAGTGCACTGGAAACTTTATGTGGGCAAGCATATGGAGCAGAGCAATATCAGAAACTTGGACTTCAAACGTACACTGCTATATTTTCTCTCAACATGGTTTGTCTGCCTTTATCTTTGATATGGATATATATGGAGGAGATACTGATTCTCACCGGTCAAGACCCTGCGATTTCTCGCGAAGCCGGAAAATACATAATCTGGCTTATTCCTGTTCTATTTGCTTATGCAACTCTTCAACCGCTCATTCGATACTTTCAAACACAGAGTTTAGTAATGCCTCTGCTGGTAACCTCTTTCGCCACCTTTTTATTCCATATTCCTCTCTGCTGGATTCTAATATTCAAGTCTGGATTAGAACACCTTGGAGGAGCATTAGCAATCGGCATTTCCTATTGGTTGAATGTGATTTTTCTTTGGTTATACATGAAGTTTTCCCCTGCCTGTTCAAAAACTCGTGCTCCAATTTCGAAGGACATATTCCATGGAATCGGAGAATTCTTTCGTTTTGCCCTGCCTTCTGCAGTAATGCAATGCCTTGAGGGGTGGTCATTCGAGCTGCTTATATTGCTGTCTGGATATTTACCAAATCCGGCTCTTGAAACCTCAGTTCTGTCCGCATGTCTTCTGGCGATTTCAACGGTCTATGCAATACCATATGGGTTTGGTGCTGCAGTAAGTACTAGAGTTTCAAATGAACTGGGAGCTGGTAACCCACAACGTGCTCGTATAGCTACTTTTGCTGCGATGTTTCTTGCAGTCACAGAGACAAGTATAACAACCACGACCCTCTATGCCTGCCGGAAAGTATTTGGTTACACTTTTAGCAACGAGAAAGAAGTCATCGATTACATCACAGTCATGGTTCCTCTAGTTTGCCTGTCTGTCATACTAGACAGTATACACGGGGTCCTTTCAGGTGTTGCTAGAGGAACTGGGTGGCAGCACATAGGGGCTTACATCAACCTTGGAGCATATTATCTTTGTGGAATCCCCGTTGCTATCGTGTTGGCTTTCTGGGCACAGCTAAGAGGAAGGGGCCTTTGGATTGGTATACAAGTTGGTGCTTTTGTGCAAGTCAGTCTGCTCGCTTTAGTAACATGTTGTACAAATTGGGAAAAGCAGGTTAAATACTCGACCCTAACTCGATCTTCTCCGCATTCATTTCCAAAATTCTCTGTTTGGTTGCCAAGAAGTCGGGAGGAAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006855 GO:0008150 GO:0009507 GO:0009536 GO:0015238 GO:0015893 GO:0022857 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

498

Amino Acids

54.95

Weight (kDa)

8.6

Isoelectric Point (pI)

45.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	46 - 206	2.2e-32	MatE
MatE	PF01554	267 - 429	3.3e-27	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15150 AT1G15150 AT1G15160 AT1G15170 AT1G15170 AT1G15180 AT1G15180
fragaria_vesca	FvH4_4g26360 FvH4_4g26361 FvH4_4g26362 FvH4_4g26362 FvH4_4g26362 FvH4_4g26362 FvH4_4g26362
malus_domestica	MD13G1031800.v1.1 MD13G1031900.v1.1 MD13G1032000.v1.1 MD16G1033900.v1.1 MD16G1034100.v1.1 MD16G1034200.v1.1 MD16G1034300.v1.1
prunus_persica	Prupe.1G320300_v2.0.a1 Prupe.1G320400_v2.0.a1 Prupe.1G320400_v2.0.a1
pyrus_communis	pycom13g02770 pycom16g02870 pycom16g02880 pycom16g02900
rosa_chinensis	RchiOBHm_Chr4g0433941 RchiOBHm_Chr4g0433951 RchiOBHm_Chr4g0433961 RchiOBHm_Chr4g0433971 RchiOBHm_Chr4g0433981 RchiOBHm_Chr4g0433991
rosa_laevigata	RLG00000006710 RLG00000006711 RLG00000006712 RLG00000006713 RLG00000006714 RLG00000006715
rosa_multiflora	Rmu_co8148826.1_g000001 Rmu_co8171710.1_g000001 Rmu_sc0000352.1_g000016 Rmu_sc0000352.1_g000017 Rmu_sc0000352.1_g000020 Rmu_sc0004983.1_g000006 Rmu_sc0004983.1_g000007 Rmu_sc0004983.1_g000008 Rmu_sc0023229.1_g000002
rosa_roxburghii	Rroxscaffold_5G00375360 Rroxscaffold_5G00375370 Rroxscaffold_5G00375380 Rroxscaffold_5G00375390 Rroxscaffold_5G00375400
rosa_rugosa	Rorug04G0272400
rosa_samantha	Rh4AG327500 Rh4AG327600 Rh4AG327700 Rh4AG327800 Rh4AG327900 Rh4AG328000 Rh4BG334800 Rh4BG334900 Rh4BG335300 Rh4BG335400 Rh4CG350600 Rh4CG350800 Rh4CG350900 Rh4DG331700 Rh4DG331800 Rh4DG331900
rosa_wichuraiana	Rw4G028390 Rw4G028400 Rw4G028410 Rw4G028420 Rw4G028430 Rw4G028440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1396
AccB1I	GGYRCC	1 cut(s)	251
AccBSI	CCGCTC	1 cut(s)	526
AccI	GTMKAC	2 cut(s)	1183, 1336
AccII	CGCG	1 cut(s)	462
AciI	CCGC	4 cut(s)	172, 524, 900, 1439
AcoI	YGGCCR	1 cut(s)	196
AcsI	RAATTY	3 cut(s)	58, 779, 1454
AcuI	CTGAAG	1 cut(s)	247
AcyI	GRCGYC	1 cut(s)	252
AdeI	CACNNNGTG	1 cut(s)	1004
AfaI	GTAC	4 cut(s)	164, 356, 964, 1390
AflIII	ACRYGT	1 cut(s)	1382
AgeI	ACCGGT	1 cut(s)	437
AjnI	CCWGG	1 cut(s)	201
AjuI	GAANNNNNNNTTGG	2 cut(s)	1309, 1341
AleI	CACNNNNGTG	1 cut(s)	204
AluBI	AGCT	6 cut(s)	12, 225, 841, 989, 1016, 1309
AluI	AGCT	6 cut(s)	12, 225, 841, 989, 1016, 1309
Alw21I	GWGCWC	3 cut(s)	292, 745, 1009
Alw26I	GTCTC	1 cut(s)	1043
Alw44I	GTGCAC	1 cut(s)	288
AoxI	GGCC	2 cut(s)	196, 1321
ApaLI	GTGCAC	1 cut(s)	288
ApeKI	GCWGC	5 cut(s)	169, 841, 953, 1025, 1225
ApoI	RAATTY	3 cut(s)	58, 779, 1454
AsiGI	ACCGGT	1 cut(s)	437
Asp700I	GAANNNNTTC	1 cut(s)	783
AspLEI	GCGC	1 cut(s)	254
AspS9I	GGNCC	3 cut(s)	134, 1192, 1321
AsuHPI	GGTGA	2 cut(s)	218, 427
AsuII	TTCGAA	1 cut(s)	752
AvaII	GGWCC	2 cut(s)	134, 1192
BaeGI	GKGCMC	2 cut(s)	292, 1306
BalI	TGGCCA	1 cut(s)	198
BanI	GGYRCC	1 cut(s)	251
BauI	CACGAG	1 cut(s)	738
BbsI	GAAGAC	1 cut(s)	899
Bbv12I	GWGCWC	3 cut(s)	292, 745, 1009
BbvI	GCAGC	5 cut(s)	156, 828, 940, 1012, 1237
BccI	CCATC	1 cut(s)	245
BciT130I	CCWGG	1 cut(s)	203
BcoDI	GTCTC	1 cut(s)	1043
BfaI	CTAG	4 cut(s)	966, 1154, 1175, 1209
BfmI	CTRYAG	2 cut(s)	804, 954
BfoI	RGCGCY	1 cut(s)	255
BfuAI	ACCTGC	1 cut(s)	1396
BisI	GCNGC	5 cut(s)	170, 842, 954, 1026, 1226
BlsI	GCNGC	5 cut(s)	171, 843, 955, 1027, 1227
BmcAI	AGTACT	1 cut(s)	964
Bme1390I	CCNGG	1 cut(s)	203
Bme18I	GGWCC	2 cut(s)	134, 1192
BmgT120I	GGNCC	3 cut(s)	134, 1192, 1321
BmiI	GGNNCC	4 cut(s)	253, 1149, 1193, 1322
BmrFI	CCNGG	1 cut(s)	203
BmrI	ACTGGG	3 cut(s)	154, 992, 1227
BmsI	GCATC	1 cut(s)	113
BmuI	ACTGGG	3 cut(s)	154, 992, 1227
BpiI	GAAGAC	1 cut(s)	899
BpmI	CTGGAG	1 cut(s)	205
Bpu14I	TTCGAA	1 cut(s)	752
BpuEI	CTTGAG	1 cut(s)	842
Bsa29I	ATCGAT	1 cut(s)	1128
BsaHI	GRCGYC	1 cut(s)	252
BsaJI	CCNNGG	4 cut(s)	202, 646, 766, 1249
BsaWI	WCCGGW	1 cut(s)	437
BsaXI	ACNNNNNCTCC	2 cut(s)	727, 757
Bse118I	RCCGGY	2 cut(s)	248, 437
Bse1I	ACTGG	5 cut(s)	160, 262, 297, 987, 1222
Bse3DI	GCAATG	1 cut(s)	821
BseBI	CCWGG	1 cut(s)	203
BseCI	ATCGAT	1 cut(s)	1128
BseDI	CCNNGG	4 cut(s)	202, 646, 766, 1249
BseGI	GGATG	1 cut(s)	128
BseMI	GCAATG	1 cut(s)	821
BseMII	CTCAG	1 cut(s)	903
BseNI	ACTGG	5 cut(s)	160, 262, 297, 987, 1222
BseRI	GAGGAG	3 cut(s)	217, 434, 666
BseSI	GKGCMC	2 cut(s)	292, 1306
BseXI	GCAGC	5 cut(s)	156, 828, 940, 1012, 1237
Bsh1236I	CGCG	1 cut(s)	462
BshFI	GGCC	2 cut(s)	198, 1323
BshNI	GGYRCC	1 cut(s)	251
BshTI	ACCGGT	1 cut(s)	437
BshVI	ATCGAT	1 cut(s)	1128
BsiHKAI	GWGCWC	3 cut(s)	292, 745, 1009
BsiSI	CCGG	5 cut(s)	249, 438, 468, 875, 1084
BsmAI	GTCTC	1 cut(s)	1043
BsmI	GAATGC	1 cut(s)	1441
BsnI	GGCC	2 cut(s)	198, 1323
Bsp119I	TTCGAA	1 cut(s)	752
Bsp1286I	GDGCHC	4 cut(s)	292, 745, 1009, 1306
Bsp1407I	TGTACA	1 cut(s)	1388
Bsp143I	GATC	1 cut(s)	1430
Bsp19I	CCATGG	1 cut(s)	766
Bsp68I	TCGCGA	1 cut(s)	462
BspACI	CCGC	4 cut(s)	172, 524, 900, 1439
BspANI	GGCC	2 cut(s)	198, 1323
BspCNI	CTCAG	1 cut(s)	902
BspDI	ATCGAT	1 cut(s)	1128
BspFNI	CGCG	1 cut(s)	462
BspLI	GGNNCC	4 cut(s)	253, 1149, 1193, 1322
BspMAI	CTGCAG	2 cut(s)	808, 958
BspMI	ACCTGC	1 cut(s)	1396
BspQI	GCTCTTC	1 cut(s)	30
BspT104I	TTCGAA	1 cut(s)	752
BspT107I	GGYRCC	1 cut(s)	251
BsrBI	CCGCTC	1 cut(s)	526
BsrDI	GCAATG	1 cut(s)	821
BsrFI	RCCGGY	2 cut(s)	248, 437
BsrGI	TGTACA	1 cut(s)	1388
BsrI	ACTGG	5 cut(s)	160, 262, 297, 987, 1222
BssAI	RCCGGY	2 cut(s)	248, 437
BssECI	CCNNGG	4 cut(s)	202, 646, 766, 1249
BssMI	GATC	1 cut(s)	1430
BssNAI	GTATAC	2 cut(s)	1184, 1337
BssNI	GRCGYC	1 cut(s)	252
BssSI	CACGAG	1 cut(s)	738
BssT1I	CCWWGG	3 cut(s)	646, 766, 1249
Bst1107I	GTATAC	2 cut(s)	1184, 1337
Bst2BI	CACGAG	1 cut(s)	738
Bst2UI	CCWGG	1 cut(s)	203
Bst4CI	ACNGT	3 cut(s)	925, 1141, 1181
Bst6I	CTCTTC	2 cut(s)	30, 522
BstACI	GRCGYC	1 cut(s)	252
BstAUI	TGTACA	1 cut(s)	1388
BstBI	TTCGAA	1 cut(s)	752
BstC8I	GCNNGC	5 cut(s)	14, 250, 312, 1081, 1371
BstDEI	CTNAG	2 cut(s)	889, 1310
BstDSI	CCRYGG	1 cut(s)	766
BstEII	GGTNACC	2 cut(s)	571, 992
BstF5I	GGATG	1 cut(s)	128
BstFNI	CGCG	1 cut(s)	462
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	1 cut(s)	254
BstKTI	GATC	1 cut(s)	1433
BstMAI	GTCTC	1 cut(s)	1043
BstMBI	GATC	1 cut(s)	1430
BstMWI	GCNNNNNNNGC	6 cut(s)	258, 320, 850, 1013, 1022, 1301
BstNI	CCWGG	1 cut(s)	203
BstNSI	RCATGY	3 cut(s)	169, 906, 1386
BstPI	GGTNACC	2 cut(s)	571, 992
BstSCI	CCNGG	1 cut(s)	201
BstSFI	CTRYAG	2 cut(s)	804, 954
BstSLI	GKGCMC	2 cut(s)	292, 1306
BstUI	CGCG	1 cut(s)	462
BstV1I	GCAGC	5 cut(s)	156, 828, 940, 1012, 1237
BstV2I	GAAGAC	1 cut(s)	899
BstZ17I	GTATAC	2 cut(s)	1184, 1337
Bsu15I	ATCGAT	1 cut(s)	1128
BsuRI	GGCC	2 cut(s)	198, 1323
BsuTUI	ATCGAT	1 cut(s)	1128
BtgI	CCRYGG	1 cut(s)	766
BtgZI	GCGATG	1 cut(s)	1043
BtsCI	GGATG	1 cut(s)	128
BtsI	GCAGTG	1 cut(s)	357
BtsIMutI	CAGTG	3 cut(s)	255, 290, 357
BtuMI	TCGCGA	1 cut(s)	462
BveI	ACCTGC	1 cut(s)	1396
Cac8I	GCNNGC	5 cut(s)	14, 250, 312, 1081, 1371
CfoI	GCGC	1 cut(s)	254
Cfr10I	RCCGGY	2 cut(s)	248, 437
Cfr13I	GGNCC	3 cut(s)	134, 1192, 1321
ClaI	ATCGAT	1 cut(s)	1128
Csp6I	GTAC	4 cut(s)	163, 355, 963, 1389
CspAI	ACCGGT	1 cut(s)	437
CviAII	CATG	8 cut(s)	87, 166, 379, 709, 767, 903, 1144, 1383
CviQI	GTAC	4 cut(s)	163, 355, 963, 1389
DdeI	CTNAG	2 cut(s)	889, 1310
DinI	GGCGCC	1 cut(s)	253
DpnI	GATC	1 cut(s)	1432
DpnII	GATC	1 cut(s)	1430
DraIII	CACNNNGTG	1 cut(s)	1004
EaeI	YGGCCR	1 cut(s)	196
Eam1104I	CTCTTC	2 cut(s)	30, 522
EarI	CTCTTC	2 cut(s)	30, 522
Eco130I	CCWWGG	3 cut(s)	646, 766, 1249
Eco47I	GGWCC	2 cut(s)	134, 1192
Eco57I	CTGAAG	1 cut(s)	247
Eco91I	GGTNACC	2 cut(s)	571, 992
EcoO109I	RGGNCCY	2 cut(s)	1192, 1321
EcoO65I	GGTNACC	2 cut(s)	571, 992
EcoRI	GAATTC	1 cut(s)	779
EcoRII	CCWGG	1 cut(s)	201
EcoT14I	CCWWGG	3 cut(s)	646, 766, 1249
EcoT22I	ATGCAT	1 cut(s)	128
EgeI	GGCGCC	1 cut(s)	253
EheI	GGCGCC	1 cut(s)	253
ErhI	CCWWGG	3 cut(s)	646, 766, 1249
FaeI	CATG	8 cut(s)	90, 169, 382, 712, 770, 906, 1147, 1386
FatI	CATG	8 cut(s)	86, 165, 378, 708, 766, 902, 1143, 1382
FauNDI	CATATG	2 cut(s)	316, 940
FblI	GTMKAC	2 cut(s)	1183, 1336
Fnu4HI	GCNGC	5 cut(s)	170, 842, 954, 1026, 1226
FokI	GGATG	1 cut(s)	135
Fsp4HI	GCNGC	5 cut(s)	170, 842, 954, 1026, 1226
FspBI	CTAG	4 cut(s)	966, 1154, 1175, 1209
GlaI	GCGC	1 cut(s)	253
GluI	GCNGC	5 cut(s)	170, 842, 954, 1026, 1226
GsuI	CTGGAG	1 cut(s)	205
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	2 cut(s)	198, 1323
HapII	CCGG	5 cut(s)	249, 438, 468, 875, 1084
HhaI	GCGC	1 cut(s)	254
Hin1I	GRCGYC	1 cut(s)	252
Hin1II	CATG	8 cut(s)	90, 169, 382, 712, 770, 906, 1147, 1386
Hin6I	GCGC	1 cut(s)	252
HinP1I	GCGC	1 cut(s)	252
HinfI	GANTC	4 cut(s)	430, 616, 771, 1272
HpaII	CCGG	5 cut(s)	249, 438, 468, 875, 1084
HphI	GGTGA	2 cut(s)	218, 427
Hpy166II	GTNNAC	5 cut(s)	209, 290, 357, 1184, 1337
Hpy188I	TCNGA	2 cut(s)	336, 776
Hpy188III	TCNNGA	6 cut(s)	443, 461, 633, 858, 881, 1481
Hpy8I	GTNNAC	5 cut(s)	209, 290, 357, 1184, 1337
HpyAV	CCTTC	3 cut(s)	748, 810, 1311
HpyCH4III	ACNGT	3 cut(s)	925, 1141, 1181
HpyCH4IV	ACGT	2 cut(s)	353, 1003
HpyCH4V	TGCA	9 cut(s)	126, 290, 512, 806, 814, 932, 956, 1040, 1357
HpyF10VI	GCNNNNNNNGC	6 cut(s)	258, 320, 850, 1013, 1022, 1301
HpyF3I	CTNAG	2 cut(s)	889, 1310
HpySE526I	ACGT	2 cut(s)	353, 1003
Hsp92I	GRCGYC	1 cut(s)	252
Hsp92II	CATG	8 cut(s)	90, 169, 382, 712, 770, 906, 1147, 1386
HspAI	GCGC	1 cut(s)	252
KasI	GGCGCC	1 cut(s)	251
KroI	GCCGGC	1 cut(s)	248
KroNI	GCCGGC	1 cut(s)	250
Kzo9I	GATC	1 cut(s)	1430
LguI	GCTCTTC	1 cut(s)	30
LmnI	GCTCC	6 cut(s)	230, 320, 653, 748, 986, 1253
Lsp1109I	GCAGC	5 cut(s)	156, 828, 940, 1012, 1237
LweI	GCATC	1 cut(s)	113
MaeI	CTAG	4 cut(s)	966, 1154, 1175, 1209
MaeII	ACGT	2 cut(s)	353, 1003
MaeIII	GTNAC	5 cut(s)	571, 992, 1042, 1097, 1378
MalI	GATC	1 cut(s)	1432
MbiI	CCGCTC	1 cut(s)	526
MboI	GATC	1 cut(s)	1430
MboII	GAAGA	7 cut(s)	17, 47, 57, 116, 509, 899, 1425
MhlI	GDGCHC	4 cut(s)	292, 745, 1009, 1306
MlsI	TGGCCA	1 cut(s)	198
MluCI	AATT	5 cut(s)	58, 747, 779, 1393, 1454
MluNI	TGGCCA	1 cut(s)	198
Mly113I	GGCGCC	1 cut(s)	252
Mox20I	TGGCCA	1 cut(s)	198
Mph1103I	ATGCAT	1 cut(s)	128
MreI	CGCCGGCG	1 cut(s)	248
MroNI	GCCGGC	1 cut(s)	248
MroXI	GAANNNNTTC	1 cut(s)	783
MscI	TGGCCA	1 cut(s)	198
MseI	TTAA	1 cut(s)	1410
MslI	CAYNNNNRTG	2 cut(s)	204, 1142
Msp20I	TGGCCA	1 cut(s)	198
MspI	CCGG	5 cut(s)	249, 438, 468, 875, 1084
MspR9I	CCNGG	1 cut(s)	203
Mva1269I	GAATGC	1 cut(s)	1441
MvaI	CCWGG	1 cut(s)	203
MvnI	CGCG	1 cut(s)	462
MwoI	GCNNNNNNNGC	6 cut(s)	258, 320, 850, 1013, 1022, 1301
NaeI	GCCGGC	1 cut(s)	250
NarI	GGCGCC	1 cut(s)	252
NcoI	CCATGG	1 cut(s)	766
NdeI	CATATG	2 cut(s)	316, 940
NdeII	GATC	1 cut(s)	1430
NgoMIV	GCCGGC	1 cut(s)	248
NlaIII	CATG	8 cut(s)	90, 169, 382, 712, 770, 906, 1147, 1386
NlaIV	GGNNCC	4 cut(s)	253, 1149, 1193, 1322
NmuCI	GTSAC	1 cut(s)	1042
NruI	TCGCGA	1 cut(s)	462
NsiI	ATGCAT	1 cut(s)	128
NspI	RCATGY	3 cut(s)	169, 906, 1386
NspV	TTCGAA	1 cut(s)	752
OliI	CACNNNNGTG	1 cut(s)	204
PciI	ACATGT	1 cut(s)	1382
PciSI	GCTCTTC	1 cut(s)	30
PctI	GAATGC	1 cut(s)	1441
PdiI	GCCGGC	1 cut(s)	250
PdmI	GAANNNNTTC	1 cut(s)	783
PfeI	GAWTC	4 cut(s)	430, 616, 771, 1272
PinAI	ACCGGT	1 cut(s)	437
PkrI	GCNGC	5 cut(s)	171, 843, 955, 1027, 1227
PluTI	GGCGCC	1 cut(s)	255
PpuMI	RGGWCCY	1 cut(s)	1192
PscI	ACATGT	1 cut(s)	1382
Psp5II	RGGWCCY	1 cut(s)	1192
Psp6I	CCWGG	1 cut(s)	201
PspEI	GGTNACC	2 cut(s)	571, 992
PspGI	CCWGG	1 cut(s)	201
PspN4I	GGNNCC	4 cut(s)	253, 1149, 1193, 1322
PspPI	GGNCC	3 cut(s)	134, 1192, 1321
PspPPI	RGGWCCY	1 cut(s)	1192
PstI	CTGCAG	2 cut(s)	808, 958
RruI	TCGCGA	1 cut(s)	462
RsaI	GTAC	4 cut(s)	164, 356, 964, 1390
RsaNI	GTAC	4 cut(s)	163, 355, 963, 1389
RseI	CAYNNNNRTG	2 cut(s)	204, 1142
SapI	GCTCTTC	1 cut(s)	30
SaqAI	TTAA	1 cut(s)	1410
SatI	GCNGC	5 cut(s)	170, 842, 954, 1026, 1226
Sau3AI	GATC	1 cut(s)	1430
Sau96I	GGNCC	3 cut(s)	134, 1192, 1321
ScaI	AGTACT	1 cut(s)	964
ScrFI	CCNGG	1 cut(s)	203
SduI	GDGCHC	4 cut(s)	292, 745, 1009, 1306
SfaNI	GCATC	1 cut(s)	113
SfcI	CTRYAG	2 cut(s)	804, 954
SfoI	GGCGCC	1 cut(s)	253
SfuI	TTCGAA	1 cut(s)	752
SgrAI	CRCCGGYG	1 cut(s)	248
SinI	GGWCC	2 cut(s)	134, 1192
SmiMI	CAYNNNNRTG	2 cut(s)	204, 1142
SmlI	CTYRAG	1 cut(s)	821
SmoI	CTYRAG	1 cut(s)	821
Sse9I	AATT	5 cut(s)	58, 747, 779, 1393, 1454
SsiI	CCGC	4 cut(s)	172, 524, 900, 1439
SspDI	GGCGCC	1 cut(s)	251
SspI	AATATT	1 cut(s)	624
SspMI	CTAG	4 cut(s)	966, 1154, 1175, 1209
StyD4I	CCNGG	1 cut(s)	201
StyI	CCWWGG	3 cut(s)	646, 766, 1249
TaaI	ACNGT	3 cut(s)	925, 1141, 1181
TaiI	ACGT	2 cut(s)	356, 1006
TaqI	TCGA	6 cut(s)	532, 752, 837, 1128, 1418, 1429
TasI	AATT	5 cut(s)	58, 747, 779, 1393, 1454
TatI	WGTACW	3 cut(s)	162, 962, 1388
TfiI	GAWTC	4 cut(s)	430, 616, 771, 1272
Tru1I	TTAA	1 cut(s)	1410
Tru9I	TTAA	1 cut(s)	1410
TscAI	CASTG	3 cut(s)	262, 297, 364
TseFI	GTSAC	1 cut(s)	1042
TseI	GCWGC	5 cut(s)	169, 841, 953, 1025, 1225
Tsp45I	GTSAC	1 cut(s)	1042
TspDTI	ATGAA	4 cut(s)	117, 725, 993, 1434
TspRI	CASTG	3 cut(s)	262, 297, 364
VneI	GTGCAC	1 cut(s)	288
VpaK11BI	GGWCC	2 cut(s)	134, 1192
XapI	RAATTY	3 cut(s)	58, 779, 1454
XceI	RCATGY	3 cut(s)	169, 906, 1386
XmiI	GTMKAC	2 cut(s)	1183, 1336
XmnI	GAANNNNTTC	1 cut(s)	783
XspI	CTAG	4 cut(s)	966, 1154, 1175, 1209
ZrmI	AGTACT	1 cut(s)	964
Zsp2I	ATGCAT	1 cut(s)	128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.