Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0000642

Physical Location & Seq

Genomic Coordinates Forward (+)

55110286 .. 55113317

Gene Structure 3032 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G028440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGGAAGAGGGATTATTATTACCAAGAGGCAAAGATCAAGTAGAGCAAAAAAAATGGTCAGGCGGTAGAAGTATTCTGACATGGTTTTTGTTCTTCGAAGAAGTGAAGAAGTTGGGATGCATAGCAGGACCTATGGTTGCTGTGATCCTATCCCAGTACTTGTTGCAGATAGTTTCGATGATGATGGTTGGTCATCTCGGTGAGCTAGCTCTCTCTAGCACCGCCATAGCCATCTCTTTAGCCGGGGTCACCGGCTTTAGTCTTTTTTTAGGAATGGCTAGTGCACTTGAAACTTTATGTGGGCAAGCTTATGGAGCTAAGCAGTATCAGAAACTTGGACTTCAAACTTACACTGCTATATTTTCTCTCAACTTAGTTTGTCTACCATTATCTTTGATATGGATATTTATGGCGGATATACTGATCTTCATGGGTCAAGATCCTTCAATTTCTCGTGAAGCTGGCAAATTCACAATTTGGCTTATTCCTGGTCTATTTGCTTATGCAACTCTTCAACCGCTCATTAGATACTTTCAGACACAGAGTTTAGTAATTCCTATGTTCATAAGCTCTTGTGCGACCCTTATGTTCCATATTCCTCTCTGTTGGGTTCTAGTGTTCAAGTCTGGCCTTGATAACTTGGGAGGAGCATTGGCAATCAGCATTTCCTATTGGGTGAATGTGATTTTACTTGGAGTATACATGAAGTTTTCTTCTGCATGTTCAAAGACTAGAGCTCCCATTTCTAAGGAGGTATTCCAAGGAACTGGAGAGTTCCTTCGCTTTGCCGTCCCTTCTGCAGTAATGATATGCCTTGAGTGGTGGTCATTTGAGCTGCTTATCTTGCTGTCTGGGCTCTTACCAAATCCTGCTCTTGAAACTTCAGTGTTATCTGTATGTCTCCAGACCATTTCGACACTATATTCAATACCATATGGATTTGGTGCTGCAGCAAGCACTAGAGTTTCAAATGAACTAGGAGCTGGCAACCCCGAAGGTGCTCGTATAGCTACTTTTGCTGCCATGTTTCTTGCAATCACGGAGGCAACTCTAACGACCACAACCCTCTTTTGCTGCCGCCATGTGTTTGGTTACCTCTTCAGCAATGAAGAAGAAGTCATCGATTATGTCAGAACAATGGCTCCTCTAGTTTGCCTGTCTGTTATACTAGACAGCTTGCAAGGCGTCCTTTCAGGTATTGCCAGAGGCTGTGGGTGGCAGCACATAGGAGCTTACATAAACCTTGGAGCATATTATCTATGTGGGATTCCAGTTGCTGCTACATTGGCTTTCTTGATACAACTAAGAGGAAGGGGCCTTTGGATTGGTATACAAGTTGGTGCTTTTGTGCAAACCGCTCTGCTTGCTTTTGTAACAACTTGTACAAACTGGGAAATGCAGGCAAGTAAGGCAAGGGAGAGAATATTCGAGGGCAGCTGTCCGGTCAATAGTGGATTGTGCCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006855 GO:0008150 GO:0009507 GO:0009536 GO:0015238 GO:0015893 GO:0022857 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

488

Amino Acids

53.14

Weight (kDa)

6.91

Isoelectric Point (pI)

32.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	44 - 204	2.8e-32	MatE
MatE	PF01554	265 - 427	1.6e-31	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15150 AT1G15150 AT1G15160 AT1G15170 AT1G15170 AT1G15180 AT1G15180
fragaria_vesca	FvH4_4g26360 FvH4_4g26361 FvH4_4g26362 FvH4_4g26362 FvH4_4g26362 FvH4_4g26362 FvH4_4g26362
malus_domestica	MD13G1031800.v1.1 MD13G1031900.v1.1 MD13G1032000.v1.1 MD16G1033900.v1.1 MD16G1034100.v1.1 MD16G1034200.v1.1 MD16G1034300.v1.1
prunus_persica	Prupe.1G320300_v2.0.a1 Prupe.1G320400_v2.0.a1 Prupe.1G320400_v2.0.a1
pyrus_communis	pycom13g02770 pycom16g02870 pycom16g02880 pycom16g02900
rosa_chinensis	RchiOBHm_Chr4g0433941 RchiOBHm_Chr4g0433951 RchiOBHm_Chr4g0433961 RchiOBHm_Chr4g0433971 RchiOBHm_Chr4g0433981 RchiOBHm_Chr4g0433991
rosa_laevigata	RLG00000006710 RLG00000006711 RLG00000006712 RLG00000006713 RLG00000006714 RLG00000006715
rosa_multiflora	Rmu_co8148826.1_g000001 Rmu_co8171710.1_g000001 Rmu_sc0000352.1_g000016 Rmu_sc0000352.1_g000017 Rmu_sc0000352.1_g000020 Rmu_sc0004983.1_g000006 Rmu_sc0004983.1_g000007 Rmu_sc0004983.1_g000008 Rmu_sc0023229.1_g000002
rosa_roxburghii	Rroxscaffold_5G00375360 Rroxscaffold_5G00375370 Rroxscaffold_5G00375380 Rroxscaffold_5G00375390 Rroxscaffold_5G00375400
rosa_rugosa	Rorug04G0272400
rosa_samantha	Rh4AG327500 Rh4AG327600 Rh4AG327700 Rh4AG327800 Rh4AG327900 Rh4AG328000 Rh4BG334800 Rh4BG334900 Rh4BG335300 Rh4BG335400 Rh4CG350600 Rh4CG350800 Rh4CG350900 Rh4DG331700 Rh4DG331800 Rh4DG331900
rosa_wichuraiana	Rw4G028390 Rw4G028400 Rw4G028410 Rw4G028420 Rw4G028430 Rw4G028440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	520, 1358
AccI	GTMKAC	3 cut(s)	382, 699, 1330
AciI	CCGC	6 cut(s)	63, 222, 413, 518, 1078, 1356
AclWI	GGATC	2 cut(s)	139, 434
AcsI	RAATTY	1 cut(s)	467
AcuI	CTGAAG	2 cut(s)	867, 1084
AcyI	GRCGYC	1 cut(s)	1185
AfaI	GTAC	2 cut(s)	158, 1384
AgsI	TTSAA	9 cut(s)	290, 344, 447, 515, 622, 726, 878, 927, 969
AjnI	CCWGG	1 cut(s)	487
AjuI	GAANNNNNNNTTGG	2 cut(s)	1303, 1335
AloI	GAACNNNNNNTCC	2 cut(s)	1126, 1158
Alw21I	GWGCWC	3 cut(s)	286, 739, 1003
Alw26I	GTCTC	1 cut(s)	905
Alw44I	GTGCAC	1 cut(s)	282
AlwI	GGATC	2 cut(s)	139, 434
AlwNI	CAGNNNCTG	2 cut(s)	1209, 1277
AoxI	GGCC	2 cut(s)	628, 1315
ApaLI	GTGCAC	1 cut(s)	282
ApeKI	GCWGC	8 cut(s)	835, 947, 950, 1019, 1074, 1219, 1277, 1434
ApoI	RAATTY	1 cut(s)	467
ArsI	GACNNNNNNTTYG	2 cut(s)	70, 102
AspS9I	GGNCC	2 cut(s)	128, 1315
AsuC2I	CCSGG	1 cut(s)	244
AsuHPI	GGTGA	3 cut(s)	212, 241, 688
AsuII	TTCGAA	1 cut(s)	96
AsuNHI	GCTAGC	1 cut(s)	205
AvaII	GGWCC	1 cut(s)	128
BaeGI	GKGCMC	1 cut(s)	286
BanII	GRGCYC	2 cut(s)	739, 858
BauI	CACGAG	1 cut(s)	453
Bbv12I	GWGCWC	3 cut(s)	286, 739, 1003
BbvI	GCAGC	8 cut(s)	822, 934, 962, 1006, 1061, 1231, 1264, 1446
BccI	CCATC	2 cut(s)	178, 239
BceAI	ACGGC	1 cut(s)	773
BciT130I	CCWGG	1 cut(s)	489
BcnI	CCSGG	1 cut(s)	244
BcoDI	GTCTC	1 cut(s)	905
BfaI	CTAG	9 cut(s)	206, 216, 279, 614, 732, 960, 977, 1148, 1169
BfmI	CTRYAG	2 cut(s)	798, 948
BisI	GCNGC	9 cut(s)	836, 948, 951, 1020, 1075, 1078, 1220, 1278, 1435
BlpI	GCTNAGC	1 cut(s)	318
BlsI	GCNGC	9 cut(s)	837, 949, 952, 1021, 1076, 1079, 1221, 1279, 1436
BmcAI	AGTACT	1 cut(s)	158
Bme1390I	CCNGG	2 cut(s)	244, 489
Bme18I	GGWCC	1 cut(s)	128
BmgT120I	GGNCC	2 cut(s)	128, 1315
BmiI	GGNNCC	2 cut(s)	1143, 1316
BmrFI	CCNGG	2 cut(s)	244, 489
BmrI	ACTGGG	2 cut(s)	148, 1399
BmsI	GCATC	1 cut(s)	107
BmtI	GCTAGC	1 cut(s)	209
BmuI	ACTGGG	2 cut(s)	148, 1399
BpmI	CTGGAG	2 cut(s)	789, 887
Bpu1102I	GCTNAGC	1 cut(s)	318
Bpu14I	TTCGAA	1 cut(s)	96
BpuEI	CTTGAG	1 cut(s)	836
BpuMI	CCSGG	1 cut(s)	244
Bsa29I	ATCGAT	1 cut(s)	1122
BsaHI	GRCGYC	1 cut(s)	1185
BsaJI	CCNNGG	3 cut(s)	243, 760, 1243
BsaWI	WCCGGW	1 cut(s)	1441
BsaXI	ACNNNNNCTCC	4 cut(s)	721, 751, 1126, 1156
Bse118I	RCCGGY	1 cut(s)	251
Bse1I	ACTGG	4 cut(s)	154, 772, 1271, 1394
Bse3DI	GCAATG	1 cut(s)	1111
BseBI	CCWGG	1 cut(s)	489
BseCI	ATCGAT	1 cut(s)	1122
BseDI	CCNNGG	3 cut(s)	243, 760, 1243
BseGI	GGATG	1 cut(s)	122
BseMI	GCAATG	1 cut(s)	1111
BseNI	ACTGG	4 cut(s)	154, 772, 1271, 1394
BseRI	GAGGAG	2 cut(s)	660, 1134
BseSI	GKGCMC	1 cut(s)	286
BseXI	GCAGC	8 cut(s)	822, 934, 962, 1006, 1061, 1231, 1264, 1446
BshFI	GGCC	2 cut(s)	630, 1317
BshVI	ATCGAT	1 cut(s)	1122
BsiHKAI	GWGCWC	3 cut(s)	286, 739, 1003
BsiSI	CCGG	3 cut(s)	243, 252, 1442
BslFI	GGGAC	1 cut(s)	776
BsmAI	GTCTC	1 cut(s)	905
BsmFI	GGGAC	1 cut(s)	776
BsnI	GGCC	2 cut(s)	630, 1317
Bsp119I	TTCGAA	1 cut(s)	96
Bsp1286I	GDGCHC	4 cut(s)	286, 739, 858, 1003
Bsp1407I	TGTACA	1 cut(s)	1382
Bsp143I	GATC	4 cut(s)	34, 144, 423, 439
Bsp1720I	GCTNAGC	1 cut(s)	318
BspACI	CCGC	6 cut(s)	63, 222, 413, 518, 1078, 1356
BspANI	GGCC	2 cut(s)	630, 1317
BspDI	ATCGAT	1 cut(s)	1122
BspLI	GGNNCC	2 cut(s)	1143, 1316
BspMAI	CTGCAG	2 cut(s)	802, 952
BspOI	GCTAGC	1 cut(s)	209
BspPI	GGATC	2 cut(s)	139, 434
BspT104I	TTCGAA	1 cut(s)	96
BsrBI	CCGCTC	2 cut(s)	520, 1358
BsrDI	GCAATG	1 cut(s)	1111
BsrFI	RCCGGY	1 cut(s)	251
BsrGI	TGTACA	1 cut(s)	1382
BsrI	ACTGG	4 cut(s)	154, 772, 1271, 1394
BssAI	RCCGGY	1 cut(s)	251
BssECI	CCNNGG	3 cut(s)	243, 760, 1243
BssMI	GATC	4 cut(s)	34, 144, 423, 439
BssNAI	GTATAC	2 cut(s)	700, 1331
BssNI	GRCGYC	1 cut(s)	1185
BssSI	CACGAG	1 cut(s)	453
BssT1I	CCWWGG	2 cut(s)	760, 1243
Bst1107I	GTATAC	2 cut(s)	700, 1331
Bst2BI	CACGAG	1 cut(s)	453
Bst2UI	CCWGG	1 cut(s)	489
Bst6I	CTCTTC	2 cut(s)	516, 1103
BstACI	GRCGYC	1 cut(s)	1185
BstAUI	TGTACA	1 cut(s)	1382
BstBI	TTCGAA	1 cut(s)	96
BstC8I	GCNNGC	8 cut(s)	207, 306, 463, 955, 985, 1178, 1365, 1401
BstDEI	CTNAG	4 cut(s)	318, 373, 747, 1304
BstEII	GGTNACC	2 cut(s)	247, 1091
BstF5I	GGATG	1 cut(s)	122
BstKTI	GATC	4 cut(s)	37, 147, 426, 442
BstMAI	GTCTC	1 cut(s)	905
BstMBI	GATC	4 cut(s)	34, 144, 423, 439
BstMWI	GCNNNNNNNGC	9 cut(s)	314, 844, 853, 1007, 1016, 1182, 1286, 1364, 1409
BstNI	CCWGG	1 cut(s)	489
BstNSI	RCATGY	1 cut(s)	723
BstPI	GGTNACC	2 cut(s)	247, 1091
BstSCI	CCNGG	2 cut(s)	242, 487
BstSFI	CTRYAG	2 cut(s)	798, 948
BstSLI	GKGCMC	1 cut(s)	286
BstV1I	GCAGC	8 cut(s)	822, 934, 962, 1006, 1061, 1231, 1264, 1446
BstX2I	RGATCY	1 cut(s)	439
BstXI	CCANNNNNNTGG	2 cut(s)	767, 1088
BstYI	RGATCY	1 cut(s)	439
BstZ17I	GTATAC	2 cut(s)	700, 1331
Bsu15I	ATCGAT	1 cut(s)	1122
BsuRI	GGCC	2 cut(s)	630, 1317
BsuTUI	ATCGAT	1 cut(s)	1122
BtsCI	GGATG	1 cut(s)	122
BtsI	GCAGTG	1 cut(s)	351
BtsIMutI	CAGTG	2 cut(s)	351, 891
Cac8I	GCNNGC	8 cut(s)	207, 306, 463, 955, 985, 1178, 1365, 1401
CaiI	CAGNNNCTG	2 cut(s)	1209, 1277
Cfr10I	RCCGGY	1 cut(s)	251
Cfr13I	GGNCC	2 cut(s)	128, 1315
ClaI	ATCGAT	1 cut(s)	1122
CseI	GACGC	1 cut(s)	1174
Csp6I	GTAC	2 cut(s)	157, 1383
CviAII	CATG	6 cut(s)	81, 430, 703, 720, 1024, 1082
CviQI	GTAC	2 cut(s)	157, 1383
DdeI	CTNAG	4 cut(s)	318, 373, 747, 1304
DpnI	GATC	4 cut(s)	36, 146, 425, 441
DpnII	GATC	4 cut(s)	34, 144, 423, 439
Eam1104I	CTCTTC	2 cut(s)	516, 1103
EarI	CTCTTC	2 cut(s)	516, 1103
EciI	GGCGGA	1 cut(s)	428
Ecl136II	GAGCTC	1 cut(s)	737
Eco130I	CCWWGG	2 cut(s)	760, 1243
Eco24I	GRGCYC	2 cut(s)	739, 858
Eco47I	GGWCC	1 cut(s)	128
Eco53kI	GAGCTC	1 cut(s)	737
Eco57I	CTGAAG	2 cut(s)	867, 1084
Eco91I	GGTNACC	2 cut(s)	247, 1091
EcoICRI	GAGCTC	1 cut(s)	737
EcoO109I	RGGNCCY	2 cut(s)	128, 1315
EcoO65I	GGTNACC	2 cut(s)	247, 1091
EcoRII	CCWGG	1 cut(s)	487
EcoT14I	CCWWGG	2 cut(s)	760, 1243
EcoT22I	ATGCAT	1 cut(s)	122
EcoT38I	GRGCYC	2 cut(s)	739, 858
ErhI	CCWWGG	2 cut(s)	760, 1243
FaeI	CATG	6 cut(s)	84, 433, 706, 723, 1027, 1085
FalI	AAGNNNNNCTT	2 cut(s)	1173, 1205
FaqI	GGGAC	1 cut(s)	776
FatI	CATG	6 cut(s)	80, 429, 702, 719, 1023, 1081
FauNDI	CATATG	1 cut(s)	934
FblI	GTMKAC	3 cut(s)	382, 699, 1330
Fnu4HI	GCNGC	9 cut(s)	836, 948, 951, 1020, 1075, 1078, 1220, 1278, 1435
FokI	GGATG	1 cut(s)	129
FriOI	GRGCYC	2 cut(s)	739, 858
Fsp4HI	GCNGC	9 cut(s)	836, 948, 951, 1020, 1075, 1078, 1220, 1278, 1435
FspBI	CTAG	9 cut(s)	206, 216, 279, 614, 732, 960, 977, 1148, 1169
GluI	GCNGC	9 cut(s)	836, 948, 951, 1020, 1075, 1078, 1220, 1278, 1435
GsuI	CTGGAG	2 cut(s)	789, 887
HaeIII	GGCC	2 cut(s)	630, 1317
HapII	CCGG	3 cut(s)	243, 252, 1442
HgaI	GACGC	1 cut(s)	1174
Hin1I	GRCGYC	1 cut(s)	1185
Hin1II	CATG	6 cut(s)	84, 433, 706, 723, 1027, 1085
HindIII	AAGCTT	1 cut(s)	306
HinfI	GANTC	1 cut(s)	1267
HpaII	CCGG	3 cut(s)	243, 252, 1442
HphI	GGTGA	3 cut(s)	212, 241, 688
Hpy166II	GTNNAC	4 cut(s)	284, 383, 700, 1331
Hpy188I	TCNGA	4 cut(s)	78, 330, 537, 1133
Hpy188III	TCNNGA	5 cut(s)	437, 455, 875, 904, 1294
Hpy8I	GTNNAC	4 cut(s)	284, 383, 700, 1331
HpyAV	CCTTC	5 cut(s)	453, 788, 804, 989, 1305
HpyF10VI	GCNNNNNNNGC	9 cut(s)	314, 844, 853, 1007, 1016, 1182, 1286, 1364, 1409
HpyF3I	CTNAG	4 cut(s)	318, 373, 747, 1304
Hsp92I	GRCGYC	1 cut(s)	1185
Hsp92II	CATG	6 cut(s)	84, 433, 706, 723, 1027, 1085
Kzo9I	GATC	4 cut(s)	34, 144, 423, 439
LmnI	GCTCC	7 cut(s)	314, 647, 742, 980, 1147, 1229, 1247
Lsp1109I	GCAGC	8 cut(s)	822, 934, 962, 1006, 1061, 1231, 1264, 1446
LweI	GCATC	1 cut(s)	107
MaeI	CTAG	9 cut(s)	206, 216, 279, 614, 732, 960, 977, 1148, 1169
MaeIII	GTNAC	3 cut(s)	247, 1091, 1372
MalI	GATC	4 cut(s)	36, 146, 425, 441
MbiI	CCGCTC	2 cut(s)	520, 1358
MboI	GATC	4 cut(s)	34, 144, 423, 439
MflI	RGATCY	1 cut(s)	439
MhlI	GDGCHC	4 cut(s)	286, 739, 858, 1003
MluCI	AATT	4 cut(s)	447, 467, 474, 552
Mph1103I	ATGCAT	1 cut(s)	122
MslI	CAYNNNNRTG	1 cut(s)	198
MspA1I	CMGCKG	1 cut(s)	1437
MspI	CCGG	3 cut(s)	243, 252, 1442
MspR9I	CCNGG	2 cut(s)	244, 489
MvaI	CCWGG	1 cut(s)	489
MwoI	GCNNNNNNNGC	9 cut(s)	314, 844, 853, 1007, 1016, 1182, 1286, 1364, 1409
NciI	CCSGG	1 cut(s)	244
NdeI	CATATG	1 cut(s)	934
NdeII	GATC	4 cut(s)	34, 144, 423, 439
NheI	GCTAGC	1 cut(s)	205
NlaIII	CATG	6 cut(s)	84, 433, 706, 723, 1027, 1085
NlaIV	GGNNCC	2 cut(s)	1143, 1316
NmuCI	GTSAC	1 cut(s)	247
NsiI	ATGCAT	1 cut(s)	122
NspI	RCATGY	1 cut(s)	723
NspV	TTCGAA	1 cut(s)	96
PfeI	GAWTC	1 cut(s)	1267
PkrI	GCNGC	9 cut(s)	837, 949, 952, 1021, 1076, 1079, 1221, 1279, 1436
PpuMI	RGGWCCY	1 cut(s)	128
Psp124BI	GAGCTC	1 cut(s)	739
Psp5II	RGGWCCY	1 cut(s)	128
Psp6I	CCWGG	1 cut(s)	487
PspEI	GGTNACC	2 cut(s)	247, 1091
PspGI	CCWGG	1 cut(s)	487
PspN4I	GGNNCC	2 cut(s)	1143, 1316
PspPI	GGNCC	2 cut(s)	128, 1315
PspPPI	RGGWCCY	1 cut(s)	128
PstI	CTGCAG	2 cut(s)	802, 952
PstNI	CAGNNNCTG	2 cut(s)	1209, 1277
PsuI	RGATCY	1 cut(s)	439
PvuII	CAGCTG	1 cut(s)	1437
RsaI	GTAC	2 cut(s)	158, 1384
RsaNI	GTAC	2 cut(s)	157, 1383
RseI	CAYNNNNRTG	1 cut(s)	198
SacI	GAGCTC	1 cut(s)	739
SatI	GCNGC	9 cut(s)	836, 948, 951, 1020, 1075, 1078, 1220, 1278, 1435
Sau3AI	GATC	4 cut(s)	34, 144, 423, 439
Sau96I	GGNCC	2 cut(s)	128, 1315
ScaI	AGTACT	1 cut(s)	158
ScrFI	CCNGG	2 cut(s)	244, 489
SduI	GDGCHC	4 cut(s)	286, 739, 858, 1003
SfaNI	GCATC	1 cut(s)	107
SfcI	CTRYAG	2 cut(s)	798, 948
SfuI	TTCGAA	1 cut(s)	96
SinI	GGWCC	1 cut(s)	128
SmiMI	CAYNNNNRTG	1 cut(s)	198
SmlI	CTYRAG	1 cut(s)	815
SmoI	CTYRAG	1 cut(s)	815
Sse9I	AATT	4 cut(s)	447, 467, 474, 552
SsiI	CCGC	6 cut(s)	63, 222, 413, 518, 1078, 1356
SspI	AATATT	1 cut(s)	1425
SspMI	CTAG	9 cut(s)	206, 216, 279, 614, 732, 960, 977, 1148, 1169
SstI	GAGCTC	1 cut(s)	739
StyD4I	CCNGG	2 cut(s)	242, 487
StyI	CCWWGG	2 cut(s)	760, 1243
TaqI	TCGA	5 cut(s)	96, 176, 914, 1122, 1428
TasI	AATT	4 cut(s)	447, 467, 474, 552
TatI	WGTACW	2 cut(s)	156, 1382
TauI	GCSGC	1 cut(s)	1080
TfiI	GAWTC	1 cut(s)	1267
TscAI	CASTG	2 cut(s)	358, 891
TseFI	GTSAC	1 cut(s)	247
TseI	GCWGC	8 cut(s)	835, 947, 950, 1019, 1074, 1219, 1277, 1434
Tsp45I	GTSAC	1 cut(s)	247
TspDTI	ATGAA	5 cut(s)	418, 553, 719, 987, 1122
TspGWI	ACGGA	1 cut(s)	1055
TspRI	CASTG	2 cut(s)	358, 891
VneI	GTGCAC	1 cut(s)	282
VpaK11BI	GGWCC	1 cut(s)	128
XapI	RAATTY	1 cut(s)	467
XceI	RCATGY	1 cut(s)	723
XmiI	GTMKAC	3 cut(s)	382, 699, 1330
XspI	CTAG	9 cut(s)	206, 216, 279, 614, 732, 960, 977, 1148, 1169
ZrmI	AGTACT	1 cut(s)	158
Zsp2I	ATGCAT	1 cut(s)	122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.