pycom13g02770

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
1913693 .. 1917066
3374 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g02770.5

Sequence Viewer

Length: 1563 bp
ATGGAAGAGAGCTTGCTATTGCCAAAATACAGAGAAGAGCAACAACGAAGCAGTAGAAATTCAAGCAGTAGTAGTAGTTGTGCTCCTGAGGCAGCCGTGGAGACTGAGTTCCGCCTGAGTTCCGCCATGAAAGAGAGCTTGCTATTGCCAAAATACAGAGAAGAGCAACAACGAAGCAGTAGAAATTCAAGCAGTAGTAGTAGTTGTCTAACATGGGTTTCTTTTTTTGAAGAAGTAAAGCGGTTGGGATGCATAGCAGGACCAATGGTTGCTGTGGTTCTATCCCAGTACATGCTGCGGTTTATTTCAATGATGATGGTTGGTCACCTGGGTGAACTTGCTCTCTCCAGCTCCTCCATAGCCATCTCCCTCGCCGGCGCCACCGGCTTCAGTGTTTTCTTGGGAATGGCAAGTGCACTGGAAACTTTATGTGGGCAAGCATATGGAGCAGAGCAATATCAGAAACTTGGACTTCTAACGTACACTGCTATATTTTCTCTCAACATGGTTTGTCTTCCTTTATCTTTGGTATGGATATATGTGGAGGAGATACTGATTTTCACCGGTCAAGACCCTGCGATTTCTCGCGAAGCCGGAAAATACATAATCTGGCTTATTCCTGGTCTATTTGCTTATGCAACTCTTCAACCGCTGATTCGATACTTTCAAACACAGAGTTTAGTAATGCCTCTGCTCGTAACCTCTTTCGCCACCTTTTTATTCCATATTCCTCTCTGCTGGATTCTAATATTCAAGTCTGGATTAGAACACCTTGGAGGAGCATTAGCAATCGGCATTTCCTATTGGTTGAATGTGATTTTTCTTTGGTTATACATGAAGTTTTCCCCTGCCTGTTCAAAAACTCGTGCTCCAATTTCGAAGGATATATTCCATGGAATTGGAGAATTCTTTCGCTTTGCCCTCCCTTCTGCAGTAATGCAATGCCTTGAGTGGTGGTCTTTCGAGCTGCTTATATTTCTGTCTGGACTTTTACCAAATCCGGCTCTTGAAACTTCAGTTCTGTCTGCATGTACTAGAGTTTCAAATGAACTGGGAGCTGGTAACCCACAACTCGCTCGCATAGCTACTTTTGCAGCGATGTTTCTTGCAGTCGCAGAGACAAGTATGACAACCACGACACTCTTTGCCTGCCGGAAAGTATTTGGTTACACTTTTAGCAACGAGAAAGAAGTCATCGATTACGTCACAATCATGGTTCCTCTAGTTTGCCTGTCTGTCATACTAGACAGTATGCACGGGGTCCTTACAGGTATTGCTAGAGGAACTGGGTGGCAGCACATAGGGGCTTACATCAACCTTGGAGCATATTATCTTTGTGGAATCCCTGTTGCTATCGCGTTGGCTTTCTGGGTTCAGCTTAGAGGAAGGGGCCTTTGGATTGGTATACAAGTTGGTGCTTTTGTGCAAGTCAGTCTGCTCGCTTTAGTAACATGTTGTACAAATTGGGAAAAGCAGGTTAAATCCTCGACCCTAACTCGATCTTCTCCGCATTCATTTTCAAAATTGTCTATTTGGTTGCCAAGAAGTCGGGAGGAAACATGA

Protein Analysis

521

Amino Acids

57.53

Weight (kDa)

8.14

Isoelectric Point (pI)

47.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1465
AccB1I GGYRCC 1 cut(s) 377
AccI GTMKAC 1 cut(s) 1405
AccII CGCG 2 cut(s) 588, 1358
AciI CCGC 6 cut(s) 112, 123, 241, 298, 650, 1508
AcsI RAATTY 3 cut(s) 58, 184, 905
AcuI CTGAAG 2 cut(s) 373, 999
AcyI GRCGYC 1 cut(s) 378
AfaI GTAC 4 cut(s) 290, 482, 1033, 1459
AflIII ACRYGT 1 cut(s) 1451
AgeI ACCGGT 1 cut(s) 563
AjnI CCWGG 2 cut(s) 327, 619
AjuI GAANNNNNNNTTGG 2 cut(s) 1378, 1410
AleI CACNNNNGTG 1 cut(s) 330
AloI GAACNNNNNNTCC 2 cut(s) 92, 124
AluBI AGCT 7 cut(s) 12, 138, 351, 967, 1058, 1085, 1378
AluI AGCT 7 cut(s) 12, 138, 351, 967, 1058, 1085, 1378
Alw21I GWGCWC 3 cut(s) 85, 418, 871
Alw26I GTCTC 2 cut(s) 95, 1112
Alw44I GTGCAC 1 cut(s) 414
AoxI GGCC 1 cut(s) 1390
ApaLI GTGCAC 1 cut(s) 414
ApeKI GCWGC 5 cut(s) 92, 295, 967, 1094, 1294
ApoI RAATTY 3 cut(s) 58, 184, 905
AsiGI ACCGGT 1 cut(s) 563
Asp700I GAANNNNTTC 1 cut(s) 909
AspLEI GCGC 1 cut(s) 380
AspS9I GGNCC 3 cut(s) 260, 1261, 1390
AsuHPI GGTGA 3 cut(s) 317, 344, 553
AsuII TTCGAA 1 cut(s) 878
AvaII GGWCC 2 cut(s) 260, 1261
AxyI CCTNAGG 1 cut(s) 87
BaeGI GKGCMC 1 cut(s) 418
BanI GGYRCC 1 cut(s) 377
BauI CACGAG 1 cut(s) 864
BbsI GAAGAC 1 cut(s) 506
Bbv12I GWGCWC 3 cut(s) 85, 418, 871
BbvI GCAGC 5 cut(s) 104, 282, 954, 1106, 1306
BccI CCATC 2 cut(s) 310, 371
BceAI ACGGC 1 cut(s) 80
BciT130I CCWGG 2 cut(s) 329, 621
BcoDI GTCTC 2 cut(s) 95, 1112
BfaI CTAG 4 cut(s) 1035, 1223, 1244, 1278
BfmI CTRYAG 1 cut(s) 930
BfoI RGCGCY 1 cut(s) 381
BfuAI ACCTGC 1 cut(s) 1465
BisI GCNGC 5 cut(s) 93, 296, 968, 1095, 1295
BlsI GCNGC 5 cut(s) 94, 297, 969, 1096, 1296
Bme1390I CCNGG 2 cut(s) 329, 621
Bme18I GGWCC 2 cut(s) 260, 1261
BmgT120I GGNCC 3 cut(s) 260, 1261, 1390
BmiI GGNNCC 4 cut(s) 379, 1218, 1262, 1391
BmrFI CCNGG 2 cut(s) 329, 621
BmrI ACTGGG 3 cut(s) 280, 1061, 1296
BmsI GCATC 1 cut(s) 239
BmuI ACTGGG 3 cut(s) 280, 1061, 1296
BpiI GAAGAC 1 cut(s) 506
BpmI CTGGAG 1 cut(s) 331
Bpu14I TTCGAA 1 cut(s) 878
BpuEI CTTGAG 1 cut(s) 968
Bsa29I ATCGAT 1 cut(s) 1197
BsaHI GRCGYC 1 cut(s) 378
BsaJI CCNNGG 5 cut(s) 96, 328, 772, 892, 1318
BsaWI WCCGGW 1 cut(s) 563
BsaXI ACNNNNNCTCC 4 cut(s) 92, 122, 853, 883
Bse118I RCCGGY 3 cut(s) 374, 383, 563
Bse1I ACTGG 4 cut(s) 286, 423, 1056, 1291
Bse21I CCTNAGG 1 cut(s) 87
Bse3DI GCAATG 1 cut(s) 947
BseBI CCWGG 2 cut(s) 329, 621
BseCI ATCGAT 1 cut(s) 1197
BseDI CCNNGG 5 cut(s) 96, 328, 772, 892, 1318
BseGI GGATG 1 cut(s) 254
BseMI GCAATG 1 cut(s) 947
BseMII CTCAG 3 cut(s) 78, 96, 107
BseNI ACTGG 4 cut(s) 286, 423, 1056, 1291
BseRI GAGGAG 3 cut(s) 343, 560, 792
BseSI GKGCMC 1 cut(s) 418
BseXI GCAGC 5 cut(s) 104, 282, 954, 1106, 1306
Bsh1236I CGCG 2 cut(s) 588, 1358
BshFI GGCC 1 cut(s) 1392
BshNI GGYRCC 1 cut(s) 377
BshTI ACCGGT 1 cut(s) 563
BshVI ATCGAT 1 cut(s) 1197
BsiHKAI GWGCWC 3 cut(s) 85, 418, 871
BsiSI CCGG 6 cut(s) 375, 384, 564, 594, 1001, 1153
BsmAI GTCTC 2 cut(s) 95, 1112
BsmI GAATGC 1 cut(s) 1510
BsnI GGCC 1 cut(s) 1392
Bsp119I TTCGAA 1 cut(s) 878
Bsp1286I GDGCHC 3 cut(s) 85, 418, 871
Bsp1407I TGTACA 1 cut(s) 1457
Bsp143I GATC 1 cut(s) 1499
Bsp19I CCATGG 1 cut(s) 892
Bsp68I TCGCGA 1 cut(s) 588
BspACI CCGC 6 cut(s) 112, 123, 241, 298, 650, 1508
BspANI GGCC 1 cut(s) 1392
BspCNI CTCAG 3 cut(s) 79, 97, 108
BspDI ATCGAT 1 cut(s) 1197
BspFNI CGCG 2 cut(s) 588, 1358
BspLI GGNNCC 4 cut(s) 379, 1218, 1262, 1391
BspMAI CTGCAG 1 cut(s) 934
BspMI ACCTGC 1 cut(s) 1465
BspQI GCTCTTC 2 cut(s) 30, 156
BspT104I TTCGAA 1 cut(s) 878
BspT107I GGYRCC 1 cut(s) 377
BsrDI GCAATG 1 cut(s) 947
BsrFI RCCGGY 3 cut(s) 374, 383, 563
BsrGI TGTACA 1 cut(s) 1457
BsrI ACTGG 4 cut(s) 286, 423, 1056, 1291
BssAI RCCGGY 3 cut(s) 374, 383, 563
BssECI CCNNGG 5 cut(s) 96, 328, 772, 892, 1318
BssMI GATC 1 cut(s) 1499
BssNAI GTATAC 1 cut(s) 1406
BssNI GRCGYC 1 cut(s) 378
BssSI CACGAG 1 cut(s) 864
BssT1I CCWWGG 3 cut(s) 772, 892, 1318
Bst1107I GTATAC 1 cut(s) 1406
Bst2BI CACGAG 1 cut(s) 864
Bst2UI CCWGG 2 cut(s) 329, 621
Bst4CI ACNGT 1 cut(s) 1250
Bst6I CTCTTC 3 cut(s) 30, 156, 648
BstACI GRCGYC 1 cut(s) 378
BstAUI TGTACA 1 cut(s) 1457
BstBI TTCGAA 1 cut(s) 878
BstC8I GCNNGC 7 cut(s) 14, 140, 376, 438, 1078, 1150, 1440
BstDEI CTNAG 4 cut(s) 87, 105, 116, 1379
BstDSI CCRYGG 2 cut(s) 96, 892
BstEII GGTNACC 2 cut(s) 323, 1061
BstF5I GGATG 1 cut(s) 254
BstFNI CGCG 2 cut(s) 588, 1358
BstH2I RGCGCY 1 cut(s) 381
BstHHI GCGC 1 cut(s) 380
BstKTI GATC 1 cut(s) 1502
BstMAI GTCTC 2 cut(s) 95, 1112
BstMBI GATC 1 cut(s) 1499
BstMWI GCNNNNNNNGC 5 cut(s) 89, 384, 446, 1082, 1091
BstNI CCWGG 2 cut(s) 329, 621
BstNSI RCATGY 3 cut(s) 295, 1032, 1455
BstPI GGTNACC 2 cut(s) 323, 1061
BstSCI CCNGG 2 cut(s) 327, 619
BstSFI CTRYAG 1 cut(s) 930
BstSLI GKGCMC 1 cut(s) 418
BstUI CGCG 2 cut(s) 588, 1358
BstV1I GCAGC 5 cut(s) 104, 282, 954, 1106, 1306
BstV2I GAAGAC 1 cut(s) 506
BstXI CCANNNNNNTGG 1 cut(s) 899
BstZ17I GTATAC 1 cut(s) 1406
Bsu15I ATCGAT 1 cut(s) 1197
Bsu36I CCTNAGG 1 cut(s) 87
BsuRI GGCC 1 cut(s) 1392
BsuTUI ATCGAT 1 cut(s) 1197
BtgI CCRYGG 2 cut(s) 96, 892
BtgZI GCGATG 1 cut(s) 1112
BtsCI GGATG 1 cut(s) 254
BtsI GCAGTG 1 cut(s) 483
BtsIMutI CAGTG 3 cut(s) 397, 416, 483
BtuMI TCGCGA 1 cut(s) 588
BveI ACCTGC 1 cut(s) 1465
Cac8I GCNNGC 7 cut(s) 14, 140, 376, 438, 1078, 1150, 1440
CfoI GCGC 1 cut(s) 380
Cfr10I RCCGGY 3 cut(s) 374, 383, 563
Cfr13I GGNCC 3 cut(s) 260, 1261, 1390
ClaI ATCGAT 1 cut(s) 1197
Csp6I GTAC 4 cut(s) 289, 481, 1032, 1458
CspAI ACCGGT 1 cut(s) 563
CviQI GTAC 4 cut(s) 289, 481, 1032, 1458
DdeI CTNAG 4 cut(s) 87, 105, 116, 1379
DinI GGCGCC 1 cut(s) 379
DpnI GATC 1 cut(s) 1501
DpnII GATC 1 cut(s) 1499
Eam1104I CTCTTC 3 cut(s) 30, 156, 648
EarI CTCTTC 3 cut(s) 30, 156, 648
EciI GGCGGA 2 cut(s) 101, 112
Eco130I CCWWGG 3 cut(s) 772, 892, 1318
Eco47I GGWCC 2 cut(s) 260, 1261
Eco57I CTGAAG 2 cut(s) 373, 999
Eco81I CCTNAGG 1 cut(s) 87
Eco91I GGTNACC 2 cut(s) 323, 1061
EcoO109I RGGNCCY 2 cut(s) 1261, 1390
EcoO65I GGTNACC 2 cut(s) 323, 1061
EcoRI GAATTC 1 cut(s) 905
EcoRII CCWGG 2 cut(s) 327, 619
EcoT14I CCWWGG 3 cut(s) 772, 892, 1318
EcoT22I ATGCAT 1 cut(s) 254
EgeI GGCGCC 1 cut(s) 379
EheI GGCGCC 1 cut(s) 379
ErhI CCWWGG 3 cut(s) 772, 892, 1318
FauNDI CATATG 1 cut(s) 442
FblI GTMKAC 1 cut(s) 1405
Fnu4HI GCNGC 5 cut(s) 93, 296, 968, 1095, 1295
FokI GGATG 1 cut(s) 261
Fsp4HI GCNGC 5 cut(s) 93, 296, 968, 1095, 1295
FspBI CTAG 4 cut(s) 1035, 1223, 1244, 1278
GlaI GCGC 1 cut(s) 379
GluI GCNGC 5 cut(s) 93, 296, 968, 1095, 1295
GsuI CTGGAG 1 cut(s) 331
HaeII RGCGCY 1 cut(s) 381
HaeIII GGCC 1 cut(s) 1392
HapII CCGG 6 cut(s) 375, 384, 564, 594, 1001, 1153
HhaI GCGC 1 cut(s) 380
Hin1I GRCGYC 1 cut(s) 378
Hin6I GCGC 1 cut(s) 378
HinP1I GCGC 1 cut(s) 378
HinfI GANTC 3 cut(s) 655, 742, 1341
HpaII CCGG 6 cut(s) 375, 384, 564, 594, 1001, 1153
HphI GGTGA 3 cut(s) 317, 344, 553
Hpy166II GTNNAC 4 cut(s) 335, 416, 483, 1406
Hpy188I TCNGA 1 cut(s) 462
Hpy188III TCNNGA 7 cut(s) 86, 569, 587, 759, 984, 1007, 1550
Hpy8I GTNNAC 4 cut(s) 335, 416, 483, 1406
HpyAV CCTTC 3 cut(s) 874, 936, 1380
HpyCH4III ACNGT 1 cut(s) 1250
HpyCH4IV ACGT 2 cut(s) 479, 1203
HpyF10VI GCNNNNNNNGC 5 cut(s) 89, 384, 446, 1082, 1091
HpyF3I CTNAG 4 cut(s) 87, 105, 116, 1379
HpySE526I ACGT 2 cut(s) 479, 1203
Hsp92I GRCGYC 1 cut(s) 378
HspAI GCGC 1 cut(s) 378
KasI GGCGCC 1 cut(s) 377
KroI GCCGGC 1 cut(s) 374
KroNI GCCGGC 1 cut(s) 376
Kzo9I GATC 1 cut(s) 1499
LguI GCTCTTC 2 cut(s) 30, 156
LmnI GCTCC 7 cut(s) 88, 356, 446, 779, 874, 1055, 1322
Lsp1109I GCAGC 5 cut(s) 104, 282, 954, 1106, 1306
LweI GCATC 1 cut(s) 239
MaeI CTAG 4 cut(s) 1035, 1223, 1244, 1278
MaeII ACGT 2 cut(s) 479, 1203
MaeIII GTNAC 6 cut(s) 323, 697, 1061, 1166, 1204, 1447
MalI GATC 1 cut(s) 1501
MboI GATC 1 cut(s) 1499
MboII GAAGA 7 cut(s) 17, 47, 173, 242, 506, 635, 1494
MhlI GDGCHC 3 cut(s) 85, 418, 871
MluCI AATT 7 cut(s) 58, 184, 873, 897, 905, 1462, 1523
Mly113I GGCGCC 1 cut(s) 378
Mph1103I ATGCAT 1 cut(s) 254
MreI CGCCGGCG 1 cut(s) 374
MroNI GCCGGC 1 cut(s) 374
MroXI GAANNNNTTC 1 cut(s) 909
MseI TTAA 1 cut(s) 1479
MslI CAYNNNNRTG 2 cut(s) 330, 1211
MspA1I CMGCKG 1 cut(s) 652
MspI CCGG 6 cut(s) 375, 384, 564, 594, 1001, 1153
MspR9I CCNGG 2 cut(s) 329, 621
Mva1269I GAATGC 1 cut(s) 1510
MvaI CCWGG 2 cut(s) 329, 621
MvnI CGCG 2 cut(s) 588, 1358
MwoI GCNNNNNNNGC 5 cut(s) 89, 384, 446, 1082, 1091
NaeI GCCGGC 1 cut(s) 376
NarI GGCGCC 1 cut(s) 378
NcoI CCATGG 1 cut(s) 892
NdeI CATATG 1 cut(s) 442
NdeII GATC 1 cut(s) 1499
NgoMIV GCCGGC 1 cut(s) 374
NlaIV GGNNCC 4 cut(s) 379, 1218, 1262, 1391
NmuCI GTSAC 2 cut(s) 323, 1204
NruI TCGCGA 1 cut(s) 588
NsiI ATGCAT 1 cut(s) 254
NspI RCATGY 3 cut(s) 295, 1032, 1455
NspV TTCGAA 1 cut(s) 878
OliI CACNNNNGTG 1 cut(s) 330
PciI ACATGT 1 cut(s) 1451
PciSI GCTCTTC 2 cut(s) 30, 156
PctI GAATGC 1 cut(s) 1510
PdiI GCCGGC 1 cut(s) 376
PdmI GAANNNNTTC 1 cut(s) 909
PfeI GAWTC 3 cut(s) 655, 742, 1341
PinAI ACCGGT 1 cut(s) 563
PkrI GCNGC 5 cut(s) 94, 297, 969, 1096, 1296
PluTI GGCGCC 1 cut(s) 381
PpuMI RGGWCCY 1 cut(s) 1261
PscI ACATGT 1 cut(s) 1451
Psp5II RGGWCCY 1 cut(s) 1261
Psp6I CCWGG 2 cut(s) 327, 619
PspEI GGTNACC 2 cut(s) 323, 1061
PspGI CCWGG 2 cut(s) 327, 619
PspN4I GGNNCC 4 cut(s) 379, 1218, 1262, 1391
PspPI GGNCC 3 cut(s) 260, 1261, 1390
PspPPI RGGWCCY 1 cut(s) 1261
PstI CTGCAG 1 cut(s) 934
RruI TCGCGA 1 cut(s) 588
RsaI GTAC 4 cut(s) 290, 482, 1033, 1459
RsaNI GTAC 4 cut(s) 289, 481, 1032, 1458
RseI CAYNNNNRTG 2 cut(s) 330, 1211
SapI GCTCTTC 2 cut(s) 30, 156
SaqAI TTAA 1 cut(s) 1479
SatI GCNGC 5 cut(s) 93, 296, 968, 1095, 1295
Sau3AI GATC 1 cut(s) 1499
Sau96I GGNCC 3 cut(s) 260, 1261, 1390
ScrFI CCNGG 2 cut(s) 329, 621
SduI GDGCHC 3 cut(s) 85, 418, 871
SfaNI GCATC 1 cut(s) 239
SfcI CTRYAG 1 cut(s) 930
SfoI GGCGCC 1 cut(s) 379
SfuI TTCGAA 1 cut(s) 878
SgrAI CRCCGGYG 1 cut(s) 374
SinI GGWCC 2 cut(s) 260, 1261
SmiMI CAYNNNNRTG 2 cut(s) 330, 1211
SmlI CTYRAG 1 cut(s) 947
SmoI CTYRAG 1 cut(s) 947
Sse9I AATT 7 cut(s) 58, 184, 873, 897, 905, 1462, 1523
SsiI CCGC 6 cut(s) 112, 123, 241, 298, 650, 1508
SspDI GGCGCC 1 cut(s) 377
SspI AATATT 1 cut(s) 750
SspMI CTAG 4 cut(s) 1035, 1223, 1244, 1278
StyD4I CCNGG 2 cut(s) 327, 619
StyI CCWWGG 3 cut(s) 772, 892, 1318
TaaI ACNGT 1 cut(s) 1250
TaiI ACGT 2 cut(s) 482, 1206
TaqI TCGA 6 cut(s) 658, 878, 963, 1197, 1487, 1498
TasI AATT 7 cut(s) 58, 184, 873, 897, 905, 1462, 1523
TatI WGTACW 3 cut(s) 288, 1031, 1457
TfiI GAWTC 3 cut(s) 655, 742, 1341
Tru1I TTAA 1 cut(s) 1479
Tru9I TTAA 1 cut(s) 1479
TscAI CASTG 3 cut(s) 397, 423, 490
TseFI GTSAC 2 cut(s) 323, 1204
TseI GCWGC 5 cut(s) 92, 295, 967, 1094, 1294
Tsp45I GTSAC 2 cut(s) 323, 1204
TspDTI ATGAA 4 cut(s) 143, 851, 1062, 1503
TspRI CASTG 3 cut(s) 397, 423, 490
VneI GTGCAC 1 cut(s) 414
VpaK11BI GGWCC 2 cut(s) 260, 1261
XapI RAATTY 3 cut(s) 58, 184, 905
XceI RCATGY 3 cut(s) 295, 1032, 1455
XmiI GTMKAC 1 cut(s) 1405
XmnI GAANNNNTTC 1 cut(s) 909
XspI CTAG 4 cut(s) 1035, 1223, 1244, 1278
Zsp2I ATGCAT 1 cut(s) 254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.