Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0000642

Physical Location & Seq

Genomic Coordinates Forward (+)

2445755 .. 2449585

Gene Structure 3831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1034100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGGAAGAGAGCTTGCTATTACCAAAACGCAGAGAAGATGAGCAGCAACAGAGAAGAAATAGCACTACAAGTATTCTGACATGGACTTCTTTCTTCGAAGAAGTGAAGAGGTTGGGATGCATAGCGGGACCAATGGTTGCCGTGATTCTATCTCAGAGCTTGTTGCTGGTCATTTCGATGATGATGGTCGGCCACCTGGGCGAGCTCGCTCTCTCAAGCTCCTCCATCGCCATCTCCCTCTCCAACGTCACCGGCTTCAGTCTTTTCTTGGGAATGGCTAGTGCATTGGAAACTCTGTGTGGCCAAGCATATGGAGCAGAACAATATCAGAAACTTGGACTTCAAACTTACACTGCTATATTTTCTCTCAACTTAGTCTGTCTTCCTTTATCTTTGATATGGATTTATATGGAGAAGTTACTGATTTTCATGGGTCAAGACCCTGTAATTTCTCATGAAGCCGGCAAGTTCACAATCTGGCTTATTCCCGCGCTTTTCGCTTATGCTACTCTTCAGCCACTCATTAGATACTTTCAGACACAAAGTTTAATAACTCCTATGCTCATAAGCTCGTGTGTGACCCTTGTGTTCCATATTCCTCTGTGTTGGATTCTAGTATTCAAGTCTGGACTGAACAACCTTGGAGGAGCATTAGCAATCAGTATTTCATATTGGGTGAATGTGATCCTACTTGCATTGTACATGAAGTTTTCTGCTGCCTGTTCAAAAACCCGAGTTCCAATTTCTATGGAGGTATTCCATGGAATCAGAGAGTTCTTTCGCTTTGCCATCCCTTCAGCAATAATGATATGCCTCGAGTGGTGGTCATTTGAGCTGCTTATCTTGCTGTCTGGACTTTTGCCAAATCCGGCTCTTGAAACTTCAGTTCTGTCTGTATGTCTGCAGACGATTTCTACACTCTATGCAATACCTTTTGGGTTTGCTGCTGCAGCAAGTACTAGAGTTTCAAATGAACTAGGAGCTGGTAACCCACAAGGTGCTCGAATAGCTACTTTTGCTGCGATGTTCCTTGCAGTCACAGAGACAACTATAACCACCACCACGCTCTTTGCCTGCCGAAATGTATTTGGTTACACTTTTAGCAATGAGAAAGAAGTCATCGATTATGTCACAACCATGGCTCCTCTAGTTTGCCTGGCCGTTACCCTAGACAGTTTGCATGGGGTCCTTTCAGGTATTGCTAGAGGAACTGGGTGGCAGCATGTAGGGGCTTGCATAAACCTCGGAGCGTATTATCTTTGTGGGATTCCAGTTGCAGCCACACTGGCTTTCTGGGTACAGCTGAAAGGAAGGGGACTTTGGATTGGAATACAAGTTGGTTCTTTTGTGCAAATCATTCTGCTCTCTTCAATAACAATTGGTACAAATTGGGAAAAGCAGGCAAGTAAGGCAAGGAAGAGGATATTTGAGGGAACCCCCCCACAAGTTAATGGCTTGTGTGACAAGGCAGAGAGTAATGAGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006855 GO:0008150 GO:0009507 GO:0009536 GO:0015238 GO:0015893 GO:0022857 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

496

Amino Acids

54.23

Weight (kDa)

7.48

Isoelectric Point (pI)

35.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	44 - 204	3.2e-31	MatE
MatE	PF01554	265 - 427	6.9e-27	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15150 AT1G15150 AT1G15160 AT1G15170 AT1G15170 AT1G15180 AT1G15180
fragaria_vesca	FvH4_4g26360 FvH4_4g26361 FvH4_4g26362 FvH4_4g26362 FvH4_4g26362 FvH4_4g26362 FvH4_4g26362
malus_domestica	MD13G1031800.v1.1 MD13G1031900.v1.1 MD13G1032000.v1.1 MD16G1033900.v1.1 MD16G1034100.v1.1 MD16G1034200.v1.1 MD16G1034300.v1.1
prunus_persica	Prupe.1G320300_v2.0.a1 Prupe.1G320400_v2.0.a1 Prupe.1G320400_v2.0.a1
pyrus_communis	pycom13g02770 pycom16g02870 pycom16g02880 pycom16g02900
rosa_chinensis	RchiOBHm_Chr4g0433941 RchiOBHm_Chr4g0433951 RchiOBHm_Chr4g0433961 RchiOBHm_Chr4g0433971 RchiOBHm_Chr4g0433981 RchiOBHm_Chr4g0433991
rosa_laevigata	RLG00000006710 RLG00000006711 RLG00000006712 RLG00000006713 RLG00000006714 RLG00000006715
rosa_multiflora	Rmu_co8148826.1_g000001 Rmu_co8171710.1_g000001 Rmu_sc0000352.1_g000016 Rmu_sc0000352.1_g000017 Rmu_sc0000352.1_g000020 Rmu_sc0004983.1_g000006 Rmu_sc0004983.1_g000007 Rmu_sc0004983.1_g000008 Rmu_sc0023229.1_g000002
rosa_roxburghii	Rroxscaffold_5G00375360 Rroxscaffold_5G00375370 Rroxscaffold_5G00375380 Rroxscaffold_5G00375390 Rroxscaffold_5G00375400
rosa_rugosa	Rorug04G0272400
rosa_samantha	Rh4AG327500 Rh4AG327600 Rh4AG327700 Rh4AG327800 Rh4AG327900 Rh4AG328000 Rh4BG334800 Rh4BG334900 Rh4BG335300 Rh4BG335400 Rh4CG350600 Rh4CG350800 Rh4CG350900 Rh4DG331700 Rh4DG331800 Rh4DG331900
rosa_wichuraiana	Rw4G028390 Rw4G028400 Rw4G028410 Rw4G028420 Rw4G028430 Rw4G028440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	491
AciI	CCGC	2 cut(s)	125, 489
AclWI	GGATC	1 cut(s)	679
AcoI	YGGCCR	3 cut(s)	190, 301, 1158
AcuI	CTGAAG	4 cut(s)	241, 497, 780, 867
AdeI	CACNNNGTG	1 cut(s)	998
AfaI	GTAC	4 cut(s)	701, 958, 1299, 1384
AgsI	TTSAA	6 cut(s)	344, 622, 726, 878, 969, 1371
AjnI	CCWGG	2 cut(s)	195, 1155
AjuI	GAANNNNNNNTTGG	2 cut(s)	1303, 1335
AluBI	AGCT	9 cut(s)	12, 159, 205, 219, 570, 835, 983, 1010, 1303
AluI	AGCT	9 cut(s)	12, 159, 205, 219, 570, 835, 983, 1010, 1303
Alw21I	GWGCWC	2 cut(s)	207, 1003
Alw26I	GTCTC	1 cut(s)	1037
AlwI	GGATC	1 cut(s)	679
Ama87I	CYCGRG	2 cut(s)	732, 815
AoxI	GGCC	3 cut(s)	190, 301, 1158
ApeKI	GCWGC	9 cut(s)	43, 716, 835, 944, 947, 950, 1019, 1219, 1277
AspLEI	GCGC	1 cut(s)	493
AspS9I	GGNCC	2 cut(s)	128, 1186
AsuHPI	GGTGA	2 cut(s)	241, 688
AsuII	TTCGAA	1 cut(s)	96
AvaI	CYCGRG	2 cut(s)	732, 815
AvaII	GGWCC	2 cut(s)	128, 1186
BalI	TGGCCA	1 cut(s)	303
BanII	GRGCYC	1 cut(s)	207
BauI	CACGAG	1 cut(s)	571
BbsI	GAAGAC	1 cut(s)	374
Bbv12I	GWGCWC	2 cut(s)	207, 1003
BbvI	GCAGC	9 cut(s)	55, 703, 822, 931, 934, 962, 1006, 1231, 1289
BccI	CCATC	4 cut(s)	178, 233, 239, 797
BceAI	ACGGC	2 cut(s)	125, 1145
BcgI	CGANNNNNNTGC	2 cut(s)	1225, 1259
BciT130I	CCWGG	2 cut(s)	197, 1157
BcoDI	GTCTC	1 cut(s)	1037
BfaI	CTAG	7 cut(s)	279, 614, 960, 977, 1148, 1169, 1203
BfmI	CTRYAG	2 cut(s)	902, 948
BglI	GCCNNNNNGGC	2 cut(s)	198, 1286
BisI	GCNGC	9 cut(s)	44, 717, 836, 945, 948, 951, 1020, 1220, 1278
BlsI	GCNGC	9 cut(s)	45, 718, 837, 946, 949, 952, 1021, 1221, 1279
BmcAI	AGTACT	1 cut(s)	958
Bme1390I	CCNGG	2 cut(s)	197, 1157
Bme18I	GGWCC	2 cut(s)	128, 1186
BmeT110I	CYCGRG	2 cut(s)	732, 815
BmgT120I	GGNCC	2 cut(s)	128, 1186
BmiI	GGNNCC	4 cut(s)	129, 1143, 1187, 1435
BmrFI	CCNGG	2 cut(s)	197, 1157
BmrI	ACTGGG	1 cut(s)	1221
BmsI	GCATC	1 cut(s)	107
BmuI	ACTGGG	1 cut(s)	1221
BpiI	GAAGAC	1 cut(s)	374
Bpu14I	TTCGAA	1 cut(s)	96
BpuEI	CTTGAG	1 cut(s)	199
Bsa29I	ATCGAT	1 cut(s)	1122
BsaJI	CCNNGG	5 cut(s)	196, 640, 760, 1137, 1243
BsaXI	ACNNNNNCTCC	2 cut(s)	1126, 1156
Bse118I	RCCGGY	2 cut(s)	251, 461
Bse1I	ACTGG	3 cut(s)	1216, 1271, 1290
Bse3DI	GCAATG	1 cut(s)	1111
BseBI	CCWGG	2 cut(s)	197, 1157
BseCI	ATCGAT	1 cut(s)	1122
BseDI	CCNNGG	5 cut(s)	196, 640, 760, 1137, 1243
BseGI	GGATG	2 cut(s)	122, 789
BseMI	GCAATG	1 cut(s)	1111
BseMII	CTCAG	1 cut(s)	167
BseNI	ACTGG	3 cut(s)	1216, 1271, 1290
BseRI	GAGGAG	3 cut(s)	211, 660, 1134
BseXI	GCAGC	9 cut(s)	55, 703, 822, 931, 934, 962, 1006, 1231, 1289
Bsh1236I	CGCG	1 cut(s)	491
BshFI	GGCC	3 cut(s)	192, 303, 1160
BshVI	ATCGAT	1 cut(s)	1122
BsiHKAI	GWGCWC	2 cut(s)	207, 1003
BsiHKCI	CYCGRG	2 cut(s)	732, 815
BsiSI	CCGG	3 cut(s)	252, 462, 869
BslFI	GGGAC	2 cut(s)	141, 1329
BsmAI	GTCTC	1 cut(s)	1037
BsmFI	GGGAC	2 cut(s)	141, 1329
BsnI	GGCC	3 cut(s)	192, 303, 1160
BsoBI	CYCGRG	2 cut(s)	732, 815
Bsp119I	TTCGAA	1 cut(s)	96
Bsp1286I	GDGCHC	2 cut(s)	207, 1003
Bsp1407I	TGTACA	1 cut(s)	699
Bsp143I	GATC	1 cut(s)	684
Bsp19I	CCATGG	2 cut(s)	760, 1137
BspACI	CCGC	2 cut(s)	125, 489
BspANI	GGCC	3 cut(s)	192, 303, 1160
BspCNI	CTCAG	1 cut(s)	166
BspDI	ATCGAT	1 cut(s)	1122
BspFNI	CGCG	1 cut(s)	491
BspHI	TCATGA	1 cut(s)	454
BspLI	GGNNCC	4 cut(s)	129, 1143, 1187, 1435
BspMAI	CTGCAG	2 cut(s)	906, 952
BspPI	GGATC	1 cut(s)	679
BspT104I	TTCGAA	1 cut(s)	96
BsrDI	GCAATG	1 cut(s)	1111
BsrFI	RCCGGY	2 cut(s)	251, 461
BsrGI	TGTACA	1 cut(s)	699
BsrI	ACTGG	3 cut(s)	1216, 1271, 1290
BssAI	RCCGGY	2 cut(s)	251, 461
BssECI	CCNNGG	5 cut(s)	196, 640, 760, 1137, 1243
BssMI	GATC	1 cut(s)	684
BssSI	CACGAG	1 cut(s)	571
BssT1I	CCWWGG	3 cut(s)	640, 760, 1137
Bst2BI	CACGAG	1 cut(s)	571
Bst2UI	CCWGG	2 cut(s)	197, 1157
Bst4CI	ACNGT	1 cut(s)	1175
Bst6I	CTCTTC	4 cut(s)	101, 516, 1372, 1412
BstAUI	TGTACA	1 cut(s)	699
BstBI	TTCGAA	1 cut(s)	96
BstC8I	GCNNGC	7 cut(s)	14, 203, 207, 463, 1075, 1234, 1401
BstDEI	CTNAG	2 cut(s)	153, 373
BstDSI	CCRYGG	2 cut(s)	760, 1137
BstEII	GGTNACC	1 cut(s)	986
BstF5I	GGATG	2 cut(s)	122, 789
BstFNI	CGCG	1 cut(s)	491
BstHHI	GCGC	1 cut(s)	493
BstKTI	GATC	1 cut(s)	687
BstMAI	GTCTC	1 cut(s)	1037
BstMBI	GATC	1 cut(s)	684
BstMWI	GCNNNNNNNGC	9 cut(s)	198, 314, 497, 844, 950, 1007, 1016, 1286, 1409
BstNI	CCWGG	2 cut(s)	197, 1157
BstNSI	RCATGY	1 cut(s)	1226
BstPI	GGTNACC	1 cut(s)	986
BstSCI	CCNGG	2 cut(s)	195, 1155
BstSFI	CTRYAG	2 cut(s)	902, 948
BstUI	CGCG	1 cut(s)	491
BstV1I	GCAGC	9 cut(s)	55, 703, 822, 931, 934, 962, 1006, 1231, 1289
BstV2I	GAAGAC	1 cut(s)	374
BstXI	CCANNNNNNTGG	1 cut(s)	311
Bsu15I	ATCGAT	1 cut(s)	1122
BsuRI	GGCC	3 cut(s)	192, 303, 1160
BsuTUI	ATCGAT	1 cut(s)	1122
BtgI	CCRYGG	2 cut(s)	760, 1137
BtgZI	GCGATG	2 cut(s)	211, 1037
BtsCI	GGATG	2 cut(s)	122, 789
BtsI	GCAGTG	1 cut(s)	351
BtsIMutI	CAGTG	2 cut(s)	351, 1283
Cac8I	GCNNGC	7 cut(s)	14, 203, 207, 463, 1075, 1234, 1401
CciI	TCATGA	1 cut(s)	454
CfoI	GCGC	1 cut(s)	493
Cfr10I	RCCGGY	2 cut(s)	251, 461
Cfr13I	GGNCC	2 cut(s)	128, 1186
ClaI	ATCGAT	1 cut(s)	1122
Csp6I	GTAC	4 cut(s)	700, 957, 1298, 1383
CspCI	CAANNNNNGTGG	2 cut(s)	1051, 1086
CviAII	CATG	8 cut(s)	81, 430, 455, 703, 761, 1138, 1181, 1223
CviQI	GTAC	4 cut(s)	700, 957, 1298, 1383
DdeI	CTNAG	2 cut(s)	153, 373
DpnI	GATC	1 cut(s)	686
DpnII	GATC	1 cut(s)	684
DraIII	CACNNNGTG	1 cut(s)	998
EaeI	YGGCCR	3 cut(s)	190, 301, 1158
Eam1104I	CTCTTC	4 cut(s)	101, 516, 1372, 1412
EarI	CTCTTC	4 cut(s)	101, 516, 1372, 1412
Ecl136II	GAGCTC	1 cut(s)	205
Eco130I	CCWWGG	3 cut(s)	640, 760, 1137
Eco24I	GRGCYC	1 cut(s)	207
Eco47I	GGWCC	2 cut(s)	128, 1186
Eco53kI	GAGCTC	1 cut(s)	205
Eco57I	CTGAAG	4 cut(s)	241, 497, 780, 867
Eco88I	CYCGRG	2 cut(s)	732, 815
Eco91I	GGTNACC	1 cut(s)	986
EcoICRI	GAGCTC	1 cut(s)	205
EcoO109I	RGGNCCY	1 cut(s)	1186
EcoO65I	GGTNACC	1 cut(s)	986
EcoRII	CCWGG	2 cut(s)	195, 1155
EcoT14I	CCWWGG	3 cut(s)	640, 760, 1137
EcoT22I	ATGCAT	1 cut(s)	122
EcoT38I	GRGCYC	1 cut(s)	207
ErhI	CCWWGG	3 cut(s)	640, 760, 1137
FaeI	CATG	8 cut(s)	84, 433, 458, 706, 764, 1141, 1184, 1226
FaqI	GGGAC	2 cut(s)	141, 1329
FatI	CATG	8 cut(s)	80, 429, 454, 702, 760, 1137, 1180, 1222
FauI	CCCGC	2 cut(s)	118, 496
FauNDI	CATATG	1 cut(s)	310
Fnu4HI	GCNGC	9 cut(s)	44, 717, 836, 945, 948, 951, 1020, 1220, 1278
FokI	GGATG	2 cut(s)	129, 776
FriOI	GRGCYC	1 cut(s)	207
Fsp4HI	GCNGC	9 cut(s)	44, 717, 836, 945, 948, 951, 1020, 1220, 1278
FspBI	CTAG	7 cut(s)	279, 614, 960, 977, 1148, 1169, 1203
GlaI	GCGC	1 cut(s)	492
GluI	GCNGC	9 cut(s)	44, 717, 836, 945, 948, 951, 1020, 1220, 1278
HaeIII	GGCC	3 cut(s)	192, 303, 1160
HapII	CCGG	3 cut(s)	252, 462, 869
HhaI	GCGC	1 cut(s)	493
Hin1II	CATG	8 cut(s)	84, 433, 458, 706, 764, 1141, 1184, 1226
Hin6I	GCGC	1 cut(s)	491
HinP1I	GCGC	1 cut(s)	491
HinfI	GANTC	4 cut(s)	145, 610, 765, 1267
HpaII	CCGG	3 cut(s)	252, 462, 869
HphI	GGTGA	2 cut(s)	241, 688
Hpy166II	GTNNAC	1 cut(s)	471
Hpy188I	TCNGA	6 cut(s)	78, 156, 330, 537, 770, 1247
Hpy188III	TCNNGA	5 cut(s)	437, 455, 627, 852, 875
Hpy8I	GTNNAC	1 cut(s)	471
HpyAV	CCTTC	2 cut(s)	804, 1305
HpyCH4III	ACNGT	1 cut(s)	1175
HpyCH4IV	ACGT	1 cut(s)	246
HpyF10VI	GCNNNNNNNGC	9 cut(s)	198, 314, 497, 844, 950, 1007, 1016, 1286, 1409
HpyF3I	CTNAG	2 cut(s)	153, 373
HpySE526I	ACGT	1 cut(s)	246
Hsp92II	CATG	8 cut(s)	84, 433, 458, 706, 764, 1141, 1184, 1226
HspAI	GCGC	1 cut(s)	491
KroI	GCCGGC	1 cut(s)	461
KroNI	GCCGGC	1 cut(s)	463
Kzo9I	GATC	1 cut(s)	684
LmnI	GCTCC	6 cut(s)	224, 314, 647, 980, 1147, 1247
Lsp1109I	GCAGC	9 cut(s)	55, 703, 822, 931, 934, 962, 1006, 1231, 1289
LweI	GCATC	1 cut(s)	107
MaeI	CTAG	7 cut(s)	279, 614, 960, 977, 1148, 1169, 1203
MaeII	ACGT	1 cut(s)	246
MaeIII	GTNAC	9 cut(s)	247, 417, 577, 986, 1036, 1091, 1129, 1162, 1460
MalI	GATC	1 cut(s)	686
MboI	GATC	1 cut(s)	684
MfeI	CAATTG	1 cut(s)	1377
MhlI	GDGCHC	2 cut(s)	207, 1003
MlsI	TGGCCA	1 cut(s)	303
MluCI	AATT	4 cut(s)	447, 741, 1377, 1387
MluNI	TGGCCA	1 cut(s)	303
MmeI	TCCRAC	2 cut(s)	267, 587
Mox20I	TGGCCA	1 cut(s)	303
Mph1103I	ATGCAT	1 cut(s)	122
MroNI	GCCGGC	1 cut(s)	461
MscI	TGGCCA	1 cut(s)	303
MseI	TTAA	2 cut(s)	548, 1449
MslI	CAYNNNNRTG	2 cut(s)	176, 1136
Msp20I	TGGCCA	1 cut(s)	303
MspA1I	CMGCKG	1 cut(s)	1303
MspI	CCGG	3 cut(s)	252, 462, 869
MspR9I	CCNGG	2 cut(s)	197, 1157
MunI	CAATTG	1 cut(s)	1377
MvaI	CCWGG	2 cut(s)	197, 1157
MvnI	CGCG	1 cut(s)	491
MwoI	GCNNNNNNNGC	9 cut(s)	198, 314, 497, 844, 950, 1007, 1016, 1286, 1409
NaeI	GCCGGC	1 cut(s)	463
NcoI	CCATGG	2 cut(s)	760, 1137
NdeI	CATATG	1 cut(s)	310
NdeII	GATC	1 cut(s)	684
NgoMIV	GCCGGC	1 cut(s)	461
NlaIII	CATG	8 cut(s)	84, 433, 458, 706, 764, 1141, 1184, 1226
NlaIV	GGNNCC	4 cut(s)	129, 1143, 1187, 1435
NmuCI	GTSAC	5 cut(s)	247, 577, 1036, 1129, 1460
NsiI	ATGCAT	1 cut(s)	122
NspI	RCATGY	1 cut(s)	1226
NspV	TTCGAA	1 cut(s)	96
PaeR7I	CTCGAG	1 cut(s)	815
PagI	TCATGA	1 cut(s)	454
PdiI	GCCGGC	1 cut(s)	463
PfeI	GAWTC	4 cut(s)	145, 610, 765, 1267
PkrI	GCNGC	9 cut(s)	45, 718, 837, 946, 949, 952, 1021, 1221, 1279
PpuMI	RGGWCCY	1 cut(s)	1186
Psp124BI	GAGCTC	1 cut(s)	207
Psp5II	RGGWCCY	1 cut(s)	1186
Psp6I	CCWGG	2 cut(s)	195, 1155
PspEI	GGTNACC	1 cut(s)	986
PspGI	CCWGG	2 cut(s)	195, 1155
PspN4I	GGNNCC	4 cut(s)	129, 1143, 1187, 1435
PspPI	GGNCC	2 cut(s)	128, 1186
PspPPI	RGGWCCY	1 cut(s)	1186
PspXI	VCTCGAGB	1 cut(s)	815
PstI	CTGCAG	2 cut(s)	906, 952
PvuII	CAGCTG	1 cut(s)	1303
RsaI	GTAC	4 cut(s)	701, 958, 1299, 1384
RsaNI	GTAC	4 cut(s)	700, 957, 1298, 1383
RseI	CAYNNNNRTG	2 cut(s)	176, 1136
SacI	GAGCTC	1 cut(s)	207
SaqAI	TTAA	2 cut(s)	548, 1449
SatI	GCNGC	9 cut(s)	44, 717, 836, 945, 948, 951, 1020, 1220, 1278
Sau3AI	GATC	1 cut(s)	684
Sau96I	GGNCC	2 cut(s)	128, 1186
ScaI	AGTACT	1 cut(s)	958
ScrFI	CCNGG	2 cut(s)	197, 1157
SduI	GDGCHC	2 cut(s)	207, 1003
SfaNI	GCATC	1 cut(s)	107
SfcI	CTRYAG	2 cut(s)	902, 948
Sfr274I	CTCGAG	1 cut(s)	815
SfuI	TTCGAA	1 cut(s)	96
SinI	GGWCC	2 cut(s)	128, 1186
SlaI	CTCGAG	1 cut(s)	815
SmiMI	CAYNNNNRTG	2 cut(s)	176, 1136
SmlI	CTYRAG	2 cut(s)	214, 815
SmoI	CTYRAG	2 cut(s)	214, 815
Sse9I	AATT	4 cut(s)	447, 741, 1377, 1387
SsiI	CCGC	2 cut(s)	125, 489
SspMI	CTAG	7 cut(s)	279, 614, 960, 977, 1148, 1169, 1203
SstI	GAGCTC	1 cut(s)	207
StyD4I	CCNGG	2 cut(s)	195, 1155
StyI	CCWWGG	3 cut(s)	640, 760, 1137
TaaI	ACNGT	1 cut(s)	1175
TaiI	ACGT	1 cut(s)	249
TaqI	TCGA	5 cut(s)	96, 176, 816, 1003, 1122
TasI	AATT	4 cut(s)	447, 741, 1377, 1387
TatI	WGTACW	2 cut(s)	699, 956
TfiI	GAWTC	4 cut(s)	145, 610, 765, 1267
Tru1I	TTAA	2 cut(s)	548, 1449
Tru9I	TTAA	2 cut(s)	548, 1449
TscAI	CASTG	2 cut(s)	358, 1290
TseFI	GTSAC	5 cut(s)	247, 577, 1036, 1129, 1460
TseI	GCWGC	9 cut(s)	43, 716, 835, 944, 947, 950, 1019, 1219, 1277
Tsp45I	GTSAC	5 cut(s)	247, 577, 1036, 1129, 1460
TspDTI	ATGAA	5 cut(s)	418, 471, 657, 719, 987
TspRI	CASTG	2 cut(s)	358, 1290
VpaK11BI	GGWCC	2 cut(s)	128, 1186
XceI	RCATGY	1 cut(s)	1226
XhoI	CTCGAG	1 cut(s)	815
XspI	CTAG	7 cut(s)	279, 614, 960, 977, 1148, 1169, 1203
ZrmI	AGTACT	1 cut(s)	958
Zsp2I	ATGCAT	1 cut(s)	122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.