MD14G1069100.v1.1

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
7512167 .. 7514668
2502 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1069100.v1.1.491

Sequence Viewer

Length: 2502 bp
ATGGCCAAGCTTGCATTTCCGTTGGCAGCCAAACTCATTGAAAGGCTCAGCTCCATTGCTTCTGAGGAGATTTGCTTGGCGTGGGGCGTTAAAGCAGATCTGGAAAAGCTTGGACGCACCATGTCCACAATCAAAGACGTGCTTGTGGATGCCCAAGAGAAGCAAGCACGTAACAGTGACCTACGCAGTTGGCTACTACAACTTAAAGATGTGTTCCTTGATGCGGAGGATCTGTTGGATGAGTTTGAGTGCGAAGCTTTGCGAAGGCTAGTGGTTCATGGCAGTGGCACAACTAGAAAGGTACGCCATTTCTTTTCCCGCTCTAATCCAGTTGCATTCCGCTTGAGAGTAGGTCATGAAATTAAGGACATAAGAGAGAGGTTAAATGAGCTTAAAGATGATAAGAATTTTGCTGACCTTCGCACTGTTCATCATCACCCTCATCTTGGTGATCATGTGGGGGAGAATAGGAATACGACCCACTCCTATGTCCGTTCTTCGGAGGTTATTGGTAGAGAAACAGACAAAAATGAAATTGTTGATCTTCTAATGATACAAGGCGATGATCATCAAGGTGGGGATAATGGGAATGTTTCTGTTATTCCTATAGTGGGATTAGGAGGTTTAGGGAAGACCACCCTTGCCCAGTCGGTGTACAATGATCAGAGAGTTGTTGAGAGTTTTGAATTAAGAATGTGGCAGCATGTGTCAGTGGACTTTGATGTTACTAGATTGACAAAAGAGATCCTTGGCTCTGCATTAGGTACAAAGATCAATGAAGGGTTGTCTCTGGATCAGTTGCAAGCACAACTACGAGACGCCTTAAAGGATAAGAAATTTCTGCTCATCTTGGATGATGTGTGGAACGAAGATCGTATCAAATGGAGTGGGTTGAGAGATTTATTGGTAGAGGGGGCCAAGGTAGGAACTAAGATTTTGGTGACGACAAGGAATATCTCAGTTGCTTCAATCATGGGCCCGGTTGGAACATACATAAATTTAGAAGTTCTCTCTTTTGAGGATTGTATGAAGTTGTTTGTAAAGTGTGCATTTGATGAAGGACAAGAAGGACAACATCCAAGCCTCTATGAAATGGGAAAAGATATTGTAAGAAAGTGCGGAGGGGTTCCCTTAGCTGTGAAAACCTTAGGGAGTCAACTTTACTCAAAGGCTGATGAGCGTCAGTGGAAATTGATTAGAGATTCTGAGATATGGGAATTAGAACAAGAGGGAGATGGTCACATTCTACCTGCTTTGAAACTGAGTTATAATCAATTACCCTCTCATTTGAAACAGTGTCTTGCTTGCTGTTCAATTCTTCCAAAGAATTACATTGAATTTGATAGCAGGGAAGTGATCAGCCATTGGATGGCACATGGAATCCTTGAATCTCGTGATCATGGGAATATGGAGTTGGAAGATGTTGGTGAGCTATATTTCAAAGAGTTATGGGAGAGATCTTTCTTTCAAAATGTGAAAGATCACATTATCTTCTATGTATTTGATATGCATGATCTCATCCATGACCTTGTACAATCAGTCGCACAAGGTGAGAGTTTTGTAGTAAACTCTGCAGGCACCAAAGGCGTCTCTGAAAATGTTAGGCATCTCTCATTTTTGGAAATTGGACAAAATGTTTCAACAACCTTGCAAAAGTTGAACAAAGTGCGGACCGTAAAAGCAACGAGTTGTAAAAATATTGATGAATCCTTCCTCCGCACTTGCATTTCAAGATTCAAATATCTGCGGGTGCTTACTTTGATGAGTGTATCTTGTGAATTGTTGCCGAGTTCCATTGGTTCTTTGAAGCATTTGAGAAGCTTGAACTTGGCTGGAAATGAAATAATCACCCAAGTACCCAATTCAATTTGTAAGCTGCAGAGCTTGCAAACTCTGAATTTCTATGGATGCGTGAATCTTGAAGAGTTGCCTAGAGACATGAGCAAGTTGATCAGCCTTAGATACCTTGATTTTACCACAAAGCAATCAAGTTTTCCAGAGAATGGATTGGGATGCTTGACATCACTTCGATATCTTGGTATCTGGGATTGTAGTAATTTAACGTGTTTGCCGCGTGATGCGTTTTATCTTGCGTCATTACGCACTCTGATCATAGGCAATTGTGAACAACTTGATTTGGTGATGGTAAACTATCAGGTAATTCCACTAAGGCTCCAAAAATTGTTCATTAGGGGAGTACCACAAATGGTGGCATTGCCTGAATGGTTTCAAGGAGCCACAAACACACTACAACACTTGGTTATTAGGTATTGTGAGAATCTGGAGGCATTACCTGGGTGGTTGACGAGTTTCACATCGCTTAGAACACTTGTCCTCAGATCATGTCCCAAACTGTTGTCTTTGCCAGAGGAGATGCATCGCCTCACTGCCTTAACAAAACTTAGAATCAGAAAGTGTCCTGATCTGGGGAGGAGATGCCAGCGCAACACAGGAGAAGATTGGCCAAAGATTTCTCATGTTCCAAATGTTTCTTTTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

834

Amino Acids

94.56

Weight (kDa)

6.51

Isoelectric Point (pI)

44.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 11 - 94 4e-22 Rx N-terminal domain
NB-ARC PF00931 195 - 353 6.7e-30 NB-ARC domain
WHD_DRP PF23559 439 - 511 4.3e-18 Disease resistance protein Winged helix domain
LRR_14 PF23598 556 - 802 3.2e-22 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1269
Acc36I ACCTGC 1 cut(s) 1258
AccB1I GGYRCC 1 cut(s) 1577
AccB7I CCANNNNNTGG 2 cut(s) 1369, 2003
AccBSI CCGCTC 1 cut(s) 321
AccII CGCG 1 cut(s) 2074
AciI CCGC 8 cut(s) 224, 319, 340, 1119, 1669, 1717, 1747, 2072
AclWI GGATC 3 cut(s) 237, 739, 801
AcoI YGGCCR 2 cut(s) 3, 2462
AcsI RAATTY 5 cut(s) 406, 836, 997, 1337, 1897
AcyI GRCGYC 2 cut(s) 819, 1587
AdeI CACNNNGTG 1 cut(s) 1550
AfaI GTAC 6 cut(s) 303, 656, 766, 1533, 1857, 2199
AfiI CCNNNNNNNGG 7 cut(s) 223, 446, 499, 611, 1369, 2003, 2426
AflIII ACRYGT 1 cut(s) 2063
AjiI CACGTC 1 cut(s) 139
AjnI CCWGG 1 cut(s) 2293
AjuI GAANNNNNNNTTGG 2 cut(s) 1397, 1429
Alw26I GTCTC 4 cut(s) 792, 810, 1594, 1929
AlwI GGATC 3 cut(s) 237, 739, 801
AoxI GGCC 4 cut(s) 3, 915, 976, 2462
ApaI GGGCCC 1 cut(s) 980
ApeKI GCWGC 3 cut(s) 26, 700, 1876
ApoI RAATTY 5 cut(s) 406, 836, 997, 1337, 1897
Asp700I GAANNNNTTC 1 cut(s) 2226
AspLEI GCGC 1 cut(s) 2445
AspS9I GGNCC 4 cut(s) 915, 976, 977, 1671
AsuC2I CCSGG 1 cut(s) 980
AsuHPI GGTGA 7 cut(s) 428, 461, 952, 1439, 1562, 1840, 2152
AvaII GGWCC 1 cut(s) 1671
AxyI CCTNAGG 1 cut(s) 1147
BaeGI GKGCMC 1 cut(s) 980
BaeI ACNNNNGTAYC 2 cut(s) 1839, 1872
BalI TGGCCA 2 cut(s) 5, 2464
BanI GGYRCC 1 cut(s) 1577
BanII GRGCYC 1 cut(s) 980
BauI CACGAG 1 cut(s) 1392
BbsI GAAGAC 1 cut(s) 638
BbvI GCAGC 3 cut(s) 38, 712, 1863
BccI CCATC 3 cut(s) 1229, 1363, 2137
BciT130I CCWGG 1 cut(s) 2295
BclI TGATCA 7 cut(s) 451, 565, 661, 1356, 1396, 1950, 2109
BcnI CCSGG 1 cut(s) 980
BcoDI GTCTC 4 cut(s) 792, 810, 1594, 1929
BfaI CTAG 4 cut(s) 269, 294, 729, 1932
BfmI CTRYAG 3 cut(s) 606, 1572, 1877
BfuAI ACCTGC 1 cut(s) 1258
BglII AGATCT 2 cut(s) 97, 1457
BisI GCNGC 4 cut(s) 27, 701, 1877, 2072
BlpI GCTNAGC 1 cut(s) 47
BlsI GCNGC 4 cut(s) 28, 702, 1878, 2073
Bme1390I CCNGG 2 cut(s) 980, 2295
Bme18I GGWCC 1 cut(s) 1671
BmgBI CACGTC 1 cut(s) 139
BmgT120I GGNCC 4 cut(s) 915, 976, 977, 1671
BmiI GGNNCC 6 cut(s) 916, 978, 1128, 1579, 2174, 2236
BmrFI CCNGG 2 cut(s) 980, 2295
BmrI ACTGGG 1 cut(s) 640
BmsI GCATC 9 cut(s) 139, 211, 1615, 1898, 2003, 2068, 2364, 2386, 2426
BmuI ACTGGG 1 cut(s) 640
BpiI GAAGAC 1 cut(s) 638
BpmI CTGGAG 1 cut(s) 2303
Bpu10I CCTNAGC 1 cut(s) 1132
Bpu1102I GCTNAGC 1 cut(s) 47
BpuEI CTTGAG 1 cut(s) 364
BpuMI CCSGG 1 cut(s) 980
BsaAI YACGTR 1 cut(s) 170
BsaBI GATNNNNATC 1 cut(s) 567
BsaHI GRCGYC 2 cut(s) 819, 1587
BsaJI CCNNGG 3 cut(s) 748, 918, 2294
BsaXI ACNNNNNCTCC 4 cut(s) 218, 248, 2157, 2187
Bsc4I CCNNNNNNNGG 7 cut(s) 223, 446, 499, 611, 1369, 2003, 2426
Bse1I ACTGG 2 cut(s) 329, 646
Bse21I CCTNAGG 1 cut(s) 1147
Bse3DI GCAATG 2 cut(s) 54, 2213
Bse8I GATNNNNATC 1 cut(s) 567
BseBI CCWGG 1 cut(s) 2295
BseDI CCNNGG 3 cut(s) 748, 918, 2294
BseGI GGATG 8 cut(s) 154, 244, 859, 1075, 1374, 1518, 1913, 2018
BseJI GATNNNNATC 1 cut(s) 567
BseLI CCNNNNNNNGG 7 cut(s) 223, 446, 499, 611, 1369, 2003, 2426
BseMI GCAATG 2 cut(s) 54, 2213
BseMII CTCAG 6 cut(s) 54, 61, 972, 1197, 1253, 2350
BseNI ACTGG 2 cut(s) 329, 646
BseRI GAGGAG 3 cut(s) 80, 2384, 2446
BseSI GKGCMC 1 cut(s) 980
BseXI GCAGC 3 cut(s) 38, 712, 1863
Bsh1236I CGCG 1 cut(s) 2074
BshFI GGCC 4 cut(s) 5, 917, 978, 2464
BshNI GGYRCC 1 cut(s) 1577
BsiSI CCGG 1 cut(s) 980
BslFI GGGAC 1 cut(s) 2331
BslI CCNNNNNNNGG 7 cut(s) 223, 446, 499, 611, 1369, 2003, 2426
BsmAI GTCTC 4 cut(s) 792, 810, 1594, 1929
BsmBI CGTCTC 2 cut(s) 810, 1594
BsmFI GGGAC 1 cut(s) 2331
BsmI GAATGC 1 cut(s) 335
BsnI GGCC 4 cut(s) 5, 917, 978, 2464
Bsp120I GGGCCC 1 cut(s) 976
Bsp1286I GDGCHC 1 cut(s) 980
Bsp1407I TGTACA 2 cut(s) 654, 1531
Bsp1720I GCTNAGC 1 cut(s) 47
BspACI CCGC 8 cut(s) 224, 319, 340, 1119, 1669, 1717, 1747, 2072
BspANI GGCC 4 cut(s) 5, 917, 978, 2464
BspCNI CTCAG 6 cut(s) 55, 60, 971, 1198, 1254, 2349
BspFNI CGCG 1 cut(s) 2074
BspHI TCATGA 1 cut(s) 355
BspLI GGNNCC 6 cut(s) 916, 978, 1128, 1579, 2174, 2236
BspMAI CTGCAG 2 cut(s) 1576, 1881
BspMI ACCTGC 1 cut(s) 1258
BspPI GGATC 3 cut(s) 237, 739, 801
BspT107I GGYRCC 1 cut(s) 1577
BsrBI CCGCTC 1 cut(s) 321
BsrDI GCAATG 2 cut(s) 54, 2213
BsrGI TGTACA 2 cut(s) 654, 1531
BsrI ACTGG 2 cut(s) 329, 646
BssECI CCNNGG 3 cut(s) 748, 918, 2294
BssNI GRCGYC 2 cut(s) 819, 1587
BssSI CACGAG 1 cut(s) 1392
BssT1I CCWWGG 2 cut(s) 748, 918
Bst2BI CACGAG 1 cut(s) 1392
Bst2UI CCWGG 1 cut(s) 2295
Bst4CI ACNGT 5 cut(s) 176, 427, 1296, 1675, 2355
Bst6I CTCTTC 1 cut(s) 1917
BstACI GRCGYC 2 cut(s) 819, 1587
BstAPI GCANNNNNTGC 1 cut(s) 1885
BstAUI TGTACA 2 cut(s) 654, 1531
BstBAI YACGTR 1 cut(s) 170
BstC8I GCNNGC 7 cut(s) 12, 165, 804, 1306, 1576, 1886, 2441
BstF5I GGATG 8 cut(s) 154, 244, 859, 1075, 1374, 1518, 1913, 2018
BstFNI CGCG 1 cut(s) 2074
BstHHI GCGC 1 cut(s) 2445
BstMAI GTCTC 4 cut(s) 792, 810, 1594, 1929
BstMWI GCNNNNNNNGC 3 cut(s) 11, 1584, 1885
BstNI CCWGG 1 cut(s) 2295
BstNSI RCATGY 1 cut(s) 707
BstSCI CCNGG 2 cut(s) 978, 2293
BstSFI CTRYAG 3 cut(s) 606, 1572, 1877
BstSLI GKGCMC 1 cut(s) 980
BstUI CGCG 1 cut(s) 2074
BstV1I GCAGC 3 cut(s) 38, 712, 1863
BstV2I GAAGAC 1 cut(s) 638
BstX2I RGATCY 4 cut(s) 97, 229, 744, 1457
BstYI RGATCY 4 cut(s) 97, 229, 744, 1457
Bsu36I CCTNAGG 1 cut(s) 1147
BsuRI GGCC 4 cut(s) 5, 917, 978, 2464
BtgZI GCGATG 3 cut(s) 576, 2301, 2363
BtrI CACGTC 1 cut(s) 139
BtsCI GGATG 8 cut(s) 154, 244, 859, 1075, 1374, 1518, 1913, 2018
BtsI GCAGTG 2 cut(s) 289, 2385
BtsIMutI CAGTG 7 cut(s) 181, 289, 423, 717, 1190, 1301, 2385
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 7 cut(s) 12, 165, 804, 1306, 1576, 1886, 2441
CciI TCATGA 1 cut(s) 355
CfoI GCGC 1 cut(s) 2445
Cfr13I GGNCC 4 cut(s) 915, 976, 977, 1671
CpoI CGGWCCG 1 cut(s) 1671
CseI GACGC 5 cut(s) 123, 827, 1169, 1576, 2082
Csp6I GTAC 6 cut(s) 302, 655, 765, 1532, 1856, 2198
CspCI CAANNNNNGTGG 2 cut(s) 868, 903
CspI CGGWCCG 1 cut(s) 1671
CviQI GTAC 6 cut(s) 302, 655, 765, 1532, 1856, 2198
DraIII CACNNNGTG 1 cut(s) 1550
EaeI YGGCCR 2 cut(s) 3, 2462
Eam1104I CTCTTC 1 cut(s) 1917
EarI CTCTTC 1 cut(s) 1917
Eco130I CCWWGG 2 cut(s) 748, 918
Eco24I GRGCYC 1 cut(s) 980
Eco32I GATATC 1 cut(s) 2033
Eco47I GGWCC 1 cut(s) 1671
Eco81I CCTNAGG 1 cut(s) 1147
EcoRII CCWGG 1 cut(s) 2293
EcoRV GATATC 1 cut(s) 2033
EcoT14I CCWWGG 2 cut(s) 748, 918
EcoT22I ATGCAT 2 cut(s) 1512, 2379
EcoT38I GRGCYC 1 cut(s) 980
ErhI CCWWGG 2 cut(s) 748, 918
Esp3I CGTCTC 2 cut(s) 810, 1594
FalI AAGNNNNNCTT 4 cut(s) 126, 158, 732, 764
FaqI GGGAC 1 cut(s) 2331
FauI CCCGC 2 cut(s) 326, 1740
FbaI TGATCA 7 cut(s) 451, 565, 661, 1356, 1396, 1950, 2109
Fnu4HI GCNGC 4 cut(s) 27, 701, 1877, 2072
FokI GGATG 8 cut(s) 161, 251, 866, 1062, 1381, 1505, 1920, 2025
FriOI GRGCYC 1 cut(s) 980
Fsp4HI GCNGC 4 cut(s) 27, 701, 1877, 2072
FspBI CTAG 4 cut(s) 269, 294, 729, 1932
GlaI GCGC 1 cut(s) 2444
GluI GCNGC 4 cut(s) 27, 701, 1877, 2072
GsuI CTGGAG 1 cut(s) 2303
HaeIII GGCC 4 cut(s) 5, 917, 978, 2464
HapII CCGG 1 cut(s) 980
HgaI GACGC 5 cut(s) 123, 827, 1169, 1576, 2082
HhaI GCGC 1 cut(s) 2445
Hin1I GRCGYC 2 cut(s) 819, 1587
Hin6I GCGC 1 cut(s) 2443
HinP1I GCGC 1 cut(s) 2443
HincII GTYRAC 2 cut(s) 1157, 2304
HindII GTYRAC 2 cut(s) 1157, 2304
HindIII AAGCTT 4 cut(s) 8, 107, 255, 1819
HinfI GANTC 9 cut(s) 1153, 1202, 1380, 1388, 1706, 1734, 1915, 2278, 2406
HpaII CCGG 1 cut(s) 980
HphI GGTGA 7 cut(s) 428, 461, 952, 1439, 1562, 1840, 2152
Hpy166II GTNNAC 8 cut(s) 126, 655, 715, 1157, 1567, 2126, 2149, 2304
Hpy188I TCNGA 9 cut(s) 64, 502, 666, 1207, 1594, 1896, 2109, 2339, 2411
Hpy188III TCNNGA 9 cut(s) 101, 356, 791, 1394, 1731, 1919, 1997, 2282, 2420
Hpy8I GTNNAC 8 cut(s) 126, 655, 715, 1157, 1567, 2126, 2149, 2304
HpyAV CCTTC 6 cut(s) 258, 428, 773, 1052, 1061, 1720
HpyCH4III ACNGT 5 cut(s) 176, 427, 1296, 1675, 2355
HpyCH4IV ACGT 3 cut(s) 138, 169, 2063
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 1584, 1885
HpySE526I ACGT 3 cut(s) 138, 169, 2063
Hsp92I GRCGYC 2 cut(s) 819, 1587
HspAI GCGC 1 cut(s) 2443
Ksp22I TGATCA 7 cut(s) 451, 565, 661, 1356, 1396, 1950, 2109
LmnI GCTCC 3 cut(s) 56, 2178, 2234
Lsp1109I GCAGC 3 cut(s) 38, 712, 1863
LweI GCATC 9 cut(s) 139, 211, 1615, 1898, 2003, 2068, 2364, 2386, 2426
MaeI CTAG 4 cut(s) 269, 294, 729, 1932
MaeII ACGT 3 cut(s) 138, 169, 2063
MaeIII GTNAC 5 cut(s) 170, 176, 724, 940, 1238
MbiI CCGCTC 1 cut(s) 321
MboII GAAGA 9 cut(s) 489, 536, 643, 881, 1310, 1430, 1483, 1934, 2468
MfeI CAATTG 1 cut(s) 2119
MflI RGATCY 4 cut(s) 97, 229, 744, 1457
MhlI GDGCHC 1 cut(s) 980
MlsI TGGCCA 2 cut(s) 5, 2464
MluNI TGGCCA 2 cut(s) 5, 2464
MlyI GAGTC 1 cut(s) 1162
MmeI TCCRAC 3 cut(s) 216, 964, 1395
Mox20I TGGCCA 2 cut(s) 5, 2464
Mph1103I ATGCAT 2 cut(s) 1512, 2379
MroXI GAANNNNTTC 1 cut(s) 2226
MscI TGGCCA 2 cut(s) 5, 2464
MseI TTAA 9 cut(s) 90, 204, 363, 383, 393, 689, 824, 2060, 2393
MslI CAYNNNNRTG 4 cut(s) 282, 447, 486, 573
Msp20I TGGCCA 2 cut(s) 5, 2464
MspI CCGG 1 cut(s) 980
MspR9I CCNGG 2 cut(s) 980, 2295
MunI CAATTG 1 cut(s) 2119
Mva1269I GAATGC 1 cut(s) 335
MvaI CCWGG 1 cut(s) 2295
MvnI CGCG 1 cut(s) 2074
MwoI GCNNNNNNNGC 3 cut(s) 11, 1584, 1885
NciI CCSGG 1 cut(s) 980
NlaIV GGNNCC 6 cut(s) 916, 978, 1128, 1579, 2174, 2236
NmeAIII GCCGAG 1 cut(s) 1812
NmuCI GTSAC 3 cut(s) 176, 940, 1238
NsiI ATGCAT 2 cut(s) 1512, 2379
NspI RCATGY 1 cut(s) 707
PagI TCATGA 1 cut(s) 355
PctI GAATGC 1 cut(s) 335
PdmI GAANNNNTTC 1 cut(s) 2226
PfeI GAWTC 8 cut(s) 1202, 1380, 1388, 1706, 1734, 1915, 2278, 2406
PflMI CCANNNNNTGG 2 cut(s) 1369, 2003
PkrI GCNGC 4 cut(s) 28, 702, 1878, 2073
PleI GAGTC 1 cut(s) 1161
PpsI GAGTC 1 cut(s) 1161
Ppu21I YACGTR 1 cut(s) 170
PsiI TTATAA 1 cut(s) 1269
Psp6I CCWGG 1 cut(s) 2293
PspGI CCWGG 1 cut(s) 2293
PspN4I GGNNCC 6 cut(s) 916, 978, 1128, 1579, 2174, 2236
PspOMI GGGCCC 1 cut(s) 976
PspPI GGNCC 4 cut(s) 915, 976, 977, 1671
PstI CTGCAG 2 cut(s) 1576, 1881
PsuI RGATCY 4 cut(s) 97, 229, 744, 1457
RsaI GTAC 6 cut(s) 303, 656, 766, 1533, 1857, 2199
RsaNI GTAC 6 cut(s) 302, 655, 765, 1532, 1856, 2198
RseI CAYNNNNRTG 4 cut(s) 282, 447, 486, 573
Rsr2I CGGWCCG 1 cut(s) 1671
RsrII CGGWCCG 1 cut(s) 1671
SaqAI TTAA 9 cut(s) 90, 204, 363, 383, 393, 689, 824, 2060, 2393
SatI GCNGC 4 cut(s) 27, 701, 1877, 2072
Sau96I GGNCC 4 cut(s) 915, 976, 977, 1671
SchI GAGTC 1 cut(s) 1162
ScrFI CCNGG 2 cut(s) 980, 2295
SduI GDGCHC 1 cut(s) 980
SfaNI GCATC 9 cut(s) 139, 211, 1615, 1898, 2003, 2068, 2364, 2386, 2426
SfcI CTRYAG 3 cut(s) 606, 1572, 1877
SinI GGWCC 1 cut(s) 1671
SmiMI CAYNNNNRTG 4 cut(s) 282, 447, 486, 573
SmlI CTYRAG 1 cut(s) 343
SmoI CTYRAG 1 cut(s) 343
SsiI CCGC 8 cut(s) 224, 319, 340, 1119, 1669, 1717, 1747, 2072
SspI AATATT 1 cut(s) 1699
SspMI CTAG 4 cut(s) 269, 294, 729, 1932
StyD4I CCNGG 2 cut(s) 978, 2293
StyI CCWWGG 2 cut(s) 748, 918
TaaI ACNGT 5 cut(s) 176, 427, 1296, 1675, 2355
TaiI ACGT 3 cut(s) 141, 172, 2066
TaqI TCGA 1 cut(s) 2029
TatI WGTACW 2 cut(s) 654, 1531
TauI GCSGC 1 cut(s) 2074
TfiI GAWTC 8 cut(s) 1202, 1380, 1388, 1706, 1734, 1915, 2278, 2406
Tru1I TTAA 9 cut(s) 90, 204, 363, 383, 393, 689, 824, 2060, 2393
Tru9I TTAA 9 cut(s) 90, 204, 363, 383, 393, 689, 824, 2060, 2393
TscAI CASTG 7 cut(s) 181, 289, 430, 717, 1190, 1301, 2392
TseFI GTSAC 3 cut(s) 176, 940, 1238
TseI GCWGC 3 cut(s) 26, 700, 1876
Tsp45I GTSAC 3 cut(s) 176, 940, 1238
TspGWI ACGGA 2 cut(s) 9, 482
TspRI CASTG 7 cut(s) 181, 289, 430, 717, 1190, 1301, 2392
Van91I CCANNNNNTGG 2 cut(s) 1369, 2003
VpaK11BI GGWCC 1 cut(s) 1671
XapI RAATTY 5 cut(s) 406, 836, 997, 1337, 1897
XceI RCATGY 1 cut(s) 707
XmnI GAANNNNTTC 1 cut(s) 2226
XspI CTAG 4 cut(s) 269, 294, 729, 1932
Zsp2I ATGCAT 2 cut(s) 1512, 2379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.