MD14G1072500.v1.1

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
8024258 .. 8026876
2619 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1072500.v1.1.491

Sequence Viewer

Length: 2619 bp
ATGAATCCATTGCTTTTTATATACCTTATCATAAGGAAGCATCATCATCATCATTATTCATACTATCTCAATTCCCCTGCACTCACCTTATCAAGAAAGAAAAAAGGCAAGAAGATGGCTGACCTTGCATTTCCGTTGGCAAGCAGACTCATTGAAAAGCTCACCTCCATTGCTTCTGAGGAGATTTGCTTGGCGTGGGGAGTTAAAGCGGATCTGCAAAAGCTTGGATACACCATGTCCATCATCAAAGACGTGCTCTTAGATGCCGAAGAGAAGCAGAAACATAATAAGCAGCTACGCAGTTGGCTACAACAACTTAATGATGTGTTCCTTGATGCAGAGGATCTGTTGGACGAGTTTGAGTGCGAAGCTTTGCGAAGACAAGTGGTTCGTGGCAGTGGCACAACTAGAAAGGTACGCCGTTTCTTTTCCCGCTCTAATCCAGTTGCATTCCGCTTGCGAGTAGGTCATGAAATTAAGGACATAAGAGAGCGGTTACACGAGCTTAAAGATGATAAGAATTTTTCTGATCTTCGCACTGTTCATCATCACCCTCATCTCGGTGACCATGTGAGGGGGAACAGGAATACAACCCACTCCTTTGTCCATGCTTCGGAGGTTATTGGTAGAGAAACAGAAAAAAATGAAATTGTTGATCTTCTAATGGTACAGGGCGATGATCATCAAGGTGGGGATAATAGGAATGTGTCTATTATTCCTATAGTGGGATTGGGAGGTTTAGGGAAGACCACACTTGCCAAGTTGGTGTACAATGACGAGAGACTCGTTGGGAGTTTTGAATTAAGAATGTGGCAGTATGTGTCAGTCGACTTTGATGTTACTAGATTGACGAAAGAGATCCTTGGCTCTGCATTAGGTACACAGATCAGTGAAGGGTTGTCTCTGGATCAGTTGCAAGCACAACTACGAGATGCTTTAAAGGATAAAAAATTTCTGCTTGTCCTGGATGATGTGTGGAATGAAGATCGTATCAAATGGAGCGAGTTGAGAGATTTGTTGATAGAGGGGGCCAAGATAGGATCTAAGATTTTGGTGACGACACGGAATATCTCAGTTGCTTCAATCATGAGCACGGTTGGAACATACATAAATTTAGAAGTTCTCTCTTTTGAGGATAGTCTGTCTTTGTTTGTAAAGTGTGCATTTGAAGAAGGACAAGAAAGGCAACATCCAAGCCTCTATGAAATGGGAAAAGATATTGTAAGAAAGTGCGGAGGGGTTCCCTTAGCTGTGAAAACCTTAGGGAGTCAACTTTACTCAAAGACCGATGAGCGTCAGTGGAAATTGATTAGAGATTCTGAGATATGGGAATTAGAACAAGAGGGAGATGGTCACATTCTACCTGCTTTGAAACTGAGTTATACTCAATTGCCCTCTCATTTGAAGCAGTGCCTTGCTTGCTGTTCAATTCTTCCAAAGAATTACATTGAATTTGATAGCAGGGAATTGATCAATAATTGGATGGCACATGGAATCCTTGAATCTCGTGATCATGGGAATATGGAGTTGGAAGATGTTGGTGAGCTATATTTCAAAGAGTTATGGGACAGATCTTTCTTTCAAAATGTTAAAGATTACACTTTCTGCTATAGATTTGATATGCACGATGTCATCCATGACCTTGTACAATCAGTCGCACAAGGTGAGAGTTTTATAGTAGACTCTGCAGGCACCAAAGGCGTCTCTGAAAATGTTAGACATCTAACATTTTTGGAAGTTGGCCAAAACGTTTCAACAACCTTGCAAAAGTTGAACAAAGTGCGGACTATACAAGTAGAGAGTTGTGAAAATATTGATGAATCCTTCCTCAGCACTTGCATTTCAAGATTCAAATATCTGCGAGTGCTTAAGTTAACCAATGCATCTTGGGAATTGTTGCCGAGTTCCATTGGTTCTTTGAAGCATTTGAAAAGCCTGAACTTGGCTGGAAATGCAATAATCACCCAAGTACCCAATTCAATTTGTAAGTTGCAAAGCTTGCAAACTCTGAGTCTCAGTAGATGCGTGAATCTTGAAGAGTTGCCTAGAGACATGAGGAAGTTGATCAGCCTTAGATACCTTGATTTTACCACAAAGCAATCAAGTTTTCCAGATAATGGAGTGGGATGTTTGACATCACTTCGAAATCTTTCTATTTTTGAGTGCAGTTATCTAACTTGTTTGCCTCGTGATACAAGTTATCTTGCGTCATTACGCACTCTGATGATAGGAAATTGTAAACAACTTGATTTGGTGATGGAAAACTATCAAGGAATTCCACTAAGGTTCCAAAAATTGGGGATTCGGAAAGTACCACGAATGGCGACATTGCCTGAATGGTTTCAAGGAGCCACAAACACACTACAAGTCTTGGTTATTAGGGATTGTGAGAACTTGGAGTCATTACCTGGGTGGTTGACGAGTTTCACATCGCTTAGAAGGCTTGTCCTCACTTCATGTCCCAAACTGTTGTCTTTGCCAGATGAGATGCATCGCCTCACTGCCTTAACAGAAGTTCGGATCAGAAATTGTCCTGATCTGGAGAGGAGATACCAGCGCGACACAGGAGAAGATTGGCCAAAGATTTCTCATGTTCCAAATGTTTATTTTTTGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

873

Amino Acids

99.93

Weight (kDa)

7.13

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 48 - 137 5.5e-25 Rx N-terminal domain
NB-ARC PF00931 233 - 391 4.9e-30 NB-ARC domain
WHD_DRP PF23559 477 - 549 3.4e-19 Disease resistance protein Winged helix domain
LRR_14 PF23598 572 - 781 1.5e-20 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1372
AccB1I GGYRCC 1 cut(s) 1691
AccB7I CCANNNNNTGG 2 cut(s) 2117, 2296
AccBSI CCGCTC 2 cut(s) 435, 493
AccI GTMKAC 2 cut(s) 828, 1680
AccII CGCG 1 cut(s) 2559
AciI CCGC 6 cut(s) 209, 433, 454, 493, 1233, 1783
AclI AACGTT 1 cut(s) 1749
AclWI GGATC 6 cut(s) 219, 351, 853, 915, 1048, 2528
AcoI YGGCCR 2 cut(s) 1741, 2576
AcsI RAATTY 5 cut(s) 520, 950, 1111, 1451, 2274
AcyI GRCGYC 1 cut(s) 1701
AdeI CACNNNGTG 1 cut(s) 1664
AfaI GTAC 7 cut(s) 417, 669, 770, 880, 1647, 1971, 2313
AfiI CCNNNNNNNGG 7 cut(s) 560, 574, 613, 725, 1942, 2117, 2296
AflII CTTAAG 1 cut(s) 1868
AjiI CACGTC 1 cut(s) 253
AjnI CCWGG 2 cut(s) 963, 2407
AjuI GAANNNNNNNTTGG 2 cut(s) 1511, 1543
AluBI AGCT 8 cut(s) 160, 223, 295, 371, 505, 1250, 1546, 1998
AluI AGCT 8 cut(s) 160, 223, 295, 371, 505, 1250, 1546, 1998
Alw21I GWGCWC 2 cut(s) 258, 1094
Alw26I GTCTC 5 cut(s) 775, 906, 1708, 2018, 2043
AlwI GGATC 6 cut(s) 219, 351, 853, 915, 1048, 2528
AoxI GGCC 3 cut(s) 1029, 1741, 2576
ApeKI GCWGC 1 cut(s) 292
ApoI RAATTY 5 cut(s) 520, 950, 1111, 1451, 2274
ArsI GACNNNNNNTTYG 4 cut(s) 372, 404, 1996, 2028
Asp700I GAANNNNTTC 2 cut(s) 2149, 2340
AspLEI GCGC 1 cut(s) 2559
AspS9I GGNCC 1 cut(s) 1029
AsuHPI GGTGA 9 cut(s) 76, 154, 542, 575, 1066, 1553, 1676, 1954, 2266
AsuII TTCGAA 1 cut(s) 2143
AxyI CCTNAGG 1 cut(s) 1261
BaeI ACNNNNGTAYC 2 cut(s) 1953, 1986
BalI TGGCCA 2 cut(s) 1743, 2578
BanI GGYRCC 1 cut(s) 1691
BauI CACGAG 3 cut(s) 500, 1506, 2187
BbsI GAAGAC 2 cut(s) 385, 752
Bbv12I GWGCWC 2 cut(s) 258, 1094
BbvCI CCTCAGC 1 cut(s) 1829
BbvI GCAGC 1 cut(s) 304
BccI CCATC 5 cut(s) 109, 248, 1343, 1477, 2251
BceAI ACGGC 1 cut(s) 405
BciT130I CCWGG 2 cut(s) 965, 2409
BciVI GTATCC 1 cut(s) 221
BclI TGATCA 4 cut(s) 679, 1470, 1510, 2064
BcoDI GTCTC 5 cut(s) 775, 906, 1708, 2018, 2043
BfaI CTAG 3 cut(s) 408, 843, 2046
BfmI CTRYAG 3 cut(s) 720, 1609, 1686
BfrI CTTAAG 1 cut(s) 1868
BfuAI ACCTGC 1 cut(s) 1372
BfuI GTATCC 1 cut(s) 221
BglII AGATCT 1 cut(s) 1571
BisI GCNGC 1 cut(s) 293
BlsI GCNGC 1 cut(s) 294
Bme1390I CCNGG 2 cut(s) 965, 2409
BmgBI CACGTC 1 cut(s) 253
BmgT120I GGNCC 1 cut(s) 1029
BmiI GGNNCC 5 cut(s) 1030, 1242, 1693, 2288, 2350
BmrFI CCNGG 2 cut(s) 965, 2409
BmsI GCATC 8 cut(s) 49, 253, 325, 922, 1892, 2012, 2478, 2500
BpiI GAAGAC 2 cut(s) 385, 752
BplI GAGNNNNNCTC 2 cut(s) 1369, 1401
BpmI CTGGAG 1 cut(s) 2561
Bpu10I CCTNAGC 2 cut(s) 1246, 1829
Bpu14I TTCGAA 1 cut(s) 2143
BsaBI GATNNNNATC 1 cut(s) 681
BsaHI GRCGYC 1 cut(s) 1701
BsaJI CCNNGG 2 cut(s) 862, 2408
Bsc4I CCNNNNNNNGG 7 cut(s) 560, 574, 613, 725, 1942, 2117, 2296
Bse1I ACTGG 1 cut(s) 443
Bse21I CCTNAGG 1 cut(s) 1261
Bse3DI GCAATG 3 cut(s) 8, 168, 2327
Bse8I GATNNNNATC 1 cut(s) 681
BseBI CCWGG 2 cut(s) 965, 2409
BseDI CCNNGG 2 cut(s) 862, 2408
BseGI GGATG 5 cut(s) 973, 1189, 1488, 1632, 2132
BseJI GATNNNNATC 1 cut(s) 681
BseLI CCNNNNNNNGG 7 cut(s) 560, 574, 613, 725, 1942, 2117, 2296
BseMI GCAATG 3 cut(s) 8, 168, 2327
BseMII CTCAG 7 cut(s) 168, 1086, 1311, 1367, 1843, 2000, 2029
BseNI ACTGG 1 cut(s) 443
BseRI GAGGAG 2 cut(s) 194, 2560
BseXI GCAGC 1 cut(s) 304
BsgI GTGCAG 2 cut(s) 63, 2185
Bsh1236I CGCG 1 cut(s) 2559
BshFI GGCC 3 cut(s) 1031, 1743, 2578
BshNI GGYRCC 1 cut(s) 1691
BsiHKAI GWGCWC 2 cut(s) 258, 1094
BslFI GGGAC 2 cut(s) 1580, 2445
BslI CCNNNNNNNGG 7 cut(s) 560, 574, 613, 725, 1942, 2117, 2296
BsmAI GTCTC 5 cut(s) 775, 906, 1708, 2018, 2043
BsmBI CGTCTC 1 cut(s) 1708
BsmFI GGGAC 2 cut(s) 1580, 2445
BsmI GAATGC 1 cut(s) 449
BsnI GGCC 3 cut(s) 1031, 1743, 2578
Bsp119I TTCGAA 1 cut(s) 2143
Bsp1286I GDGCHC 2 cut(s) 258, 1094
Bsp1407I TGTACA 2 cut(s) 768, 1645
BspACI CCGC 6 cut(s) 209, 433, 454, 493, 1233, 1783
BspANI GGCC 3 cut(s) 1031, 1743, 2578
BspCNI CTCAG 7 cut(s) 169, 1085, 1312, 1368, 1842, 2001, 2028
BspFNI CGCG 1 cut(s) 2559
BspHI TCATGA 2 cut(s) 469, 1086
BspLI GGNNCC 5 cut(s) 1030, 1242, 1693, 2288, 2350
BspMAI CTGCAG 1 cut(s) 1690
BspMI ACCTGC 1 cut(s) 1372
BspPI GGATC 6 cut(s) 219, 351, 853, 915, 1048, 2528
BspT104I TTCGAA 1 cut(s) 2143
BspT107I GGYRCC 1 cut(s) 1691
BspTI CTTAAG 1 cut(s) 1868
BsrBI CCGCTC 2 cut(s) 435, 493
BsrDI GCAATG 3 cut(s) 8, 168, 2327
BsrGI TGTACA 2 cut(s) 768, 1645
BsrI ACTGG 1 cut(s) 443
BssECI CCNNGG 2 cut(s) 862, 2408
BssNI GRCGYC 1 cut(s) 1701
BssSI CACGAG 3 cut(s) 500, 1506, 2187
BssT1I CCWWGG 1 cut(s) 862
Bst2BI CACGAG 3 cut(s) 500, 1506, 2187
Bst2UI CCWGG 2 cut(s) 965, 2409
Bst4CI ACNGT 3 cut(s) 541, 1096, 2469
Bst6I CTCTTC 2 cut(s) 264, 2031
BstACI GRCGYC 1 cut(s) 1701
BstAFI CTTAAG 1 cut(s) 1868
BstAPI GCANNNNNTGC 1 cut(s) 1999
BstAUI TGTACA 2 cut(s) 768, 1645
BstBI TTCGAA 1 cut(s) 2143
BstC8I GCNNGC 6 cut(s) 142, 458, 918, 1420, 1690, 2000
BstEII GGTNACC 1 cut(s) 563
BstF5I GGATG 5 cut(s) 973, 1189, 1488, 1632, 2132
BstFNI CGCG 1 cut(s) 2559
BstHHI GCGC 1 cut(s) 2559
BstMAI GTCTC 5 cut(s) 775, 906, 1708, 2018, 2043
BstMWI GCNNNNNNNGC 6 cut(s) 125, 1419, 1698, 1952, 1999, 2440
BstNI CCWGG 2 cut(s) 965, 2409
BstPI GGTNACC 1 cut(s) 563
BstSCI CCNGG 2 cut(s) 963, 2407
BstSFI CTRYAG 3 cut(s) 720, 1609, 1686
BstUI CGCG 1 cut(s) 2559
BstV1I GCAGC 1 cut(s) 304
BstV2I GAAGAC 2 cut(s) 385, 752
BstX2I RGATCY 5 cut(s) 211, 343, 858, 1040, 1571
BstYI RGATCY 5 cut(s) 211, 343, 858, 1040, 1571
Bsu36I CCTNAGG 1 cut(s) 1261
BsuI GTATCC 1 cut(s) 221
BsuRI GGCC 3 cut(s) 1031, 1743, 2578
BtgZI GCGATG 3 cut(s) 690, 2415, 2477
BtrI CACGTC 1 cut(s) 253
BtsCI GGATG 5 cut(s) 973, 1189, 1488, 1632, 2132
BtsI GCAGTG 3 cut(s) 403, 1415, 2499
BtsIMutI CAGTG 6 cut(s) 403, 537, 895, 1304, 1415, 2499
BveI ACCTGC 1 cut(s) 1372
Cac8I GCNNGC 6 cut(s) 142, 458, 918, 1420, 1690, 2000
CciI TCATGA 2 cut(s) 469, 1086
CfoI GCGC 1 cut(s) 2559
Cfr13I GGNCC 1 cut(s) 1029
CseI GACGC 3 cut(s) 1283, 1690, 2196
Csp6I GTAC 7 cut(s) 416, 668, 769, 879, 1646, 1970, 2312
CviQI GTAC 7 cut(s) 416, 668, 769, 879, 1646, 1970, 2312
DraI TTTAAA 1 cut(s) 939
DraIII CACNNNGTG 1 cut(s) 1664
EaeI YGGCCR 2 cut(s) 1741, 2576
Eam1104I CTCTTC 2 cut(s) 264, 2031
EarI CTCTTC 2 cut(s) 264, 2031
Eco130I CCWWGG 1 cut(s) 862
Eco81I CCTNAGG 1 cut(s) 1261
Eco91I GGTNACC 1 cut(s) 563
EcoO65I GGTNACC 1 cut(s) 563
EcoRI GAATTC 1 cut(s) 2274
EcoRII CCWGG 2 cut(s) 963, 2407
EcoT14I CCWWGG 1 cut(s) 862
EcoT22I ATGCAT 2 cut(s) 1885, 2493
ErhI CCWWGG 1 cut(s) 862
Esp3I CGTCTC 1 cut(s) 1708
FalI AAGNNNNNCTT 2 cut(s) 846, 878
FaqI GGGAC 2 cut(s) 1580, 2445
FauI CCCGC 1 cut(s) 440
FbaI TGATCA 4 cut(s) 679, 1470, 1510, 2064
FblI GTMKAC 2 cut(s) 828, 1680
Fnu4HI GCNGC 1 cut(s) 293
FokI GGATG 5 cut(s) 980, 1176, 1495, 1619, 2139
Fsp4HI GCNGC 1 cut(s) 293
FspBI CTAG 3 cut(s) 408, 843, 2046
GlaI GCGC 1 cut(s) 2558
GluI GCNGC 1 cut(s) 293
GsuI CTGGAG 1 cut(s) 2561
HaeIII GGCC 3 cut(s) 1031, 1743, 2578
HgaI GACGC 3 cut(s) 1283, 1690, 2196
HhaI GCGC 1 cut(s) 2559
Hin1I GRCGYC 1 cut(s) 1701
Hin6I GCGC 1 cut(s) 2557
HinP1I GCGC 1 cut(s) 2557
HincII GTYRAC 4 cut(s) 829, 1271, 1875, 2418
HindII GTYRAC 4 cut(s) 829, 1271, 1875, 2418
HindIII AAGCTT 3 cut(s) 221, 369, 1996
HpaI GTTAAC 1 cut(s) 1875
HphI GGTGA 9 cut(s) 76, 154, 542, 575, 1066, 1553, 1676, 1954, 2266
Hpy166II GTNNAC 8 cut(s) 769, 829, 881, 1271, 1681, 1875, 2240, 2418
Hpy8I GTNNAC 8 cut(s) 769, 829, 881, 1271, 1681, 1875, 2240, 2418
HpyAV CCTTC 4 cut(s) 887, 1166, 1834, 2433
HpyCH4III ACNGT 3 cut(s) 541, 1096, 2469
HpyCH4IV ACGT 2 cut(s) 252, 1749
HpyF10VI GCNNNNNNNGC 6 cut(s) 125, 1419, 1698, 1952, 1999, 2440
HpySE526I ACGT 2 cut(s) 252, 1749
Hsp92I GRCGYC 1 cut(s) 1701
HspAI GCGC 1 cut(s) 2557
Ksp22I TGATCA 4 cut(s) 679, 1470, 1510, 2064
KspAI GTTAAC 1 cut(s) 1875
LmnI GCTCC 2 cut(s) 999, 2348
Lsp1109I GCAGC 1 cut(s) 304
LweI GCATC 8 cut(s) 49, 253, 325, 922, 1892, 2012, 2478, 2500
MaeI CTAG 3 cut(s) 408, 843, 2046
MaeII ACGT 2 cut(s) 252, 1749
MaeIII GTNAC 5 cut(s) 495, 563, 838, 1054, 1352
MbiI CCGCTC 2 cut(s) 435, 493
MfeI CAATTG 1 cut(s) 1388
MflI RGATCY 5 cut(s) 211, 343, 858, 1040, 1571
MhlI GDGCHC 2 cut(s) 258, 1094
MlsI TGGCCA 2 cut(s) 1743, 2578
MluNI TGGCCA 2 cut(s) 1743, 2578
MlyI GAGTC 6 cut(s) 141, 777, 1276, 1676, 2020, 2408
MmeI TCCRAC 3 cut(s) 330, 1078, 1509
Mox20I TGGCCA 2 cut(s) 1743, 2578
Mph1103I ATGCAT 2 cut(s) 1885, 2493
MroXI GAANNNNTTC 2 cut(s) 2149, 2340
MscI TGGCCA 2 cut(s) 1743, 2578
MslI CAYNNNNRTG 3 cut(s) 561, 687, 2222
Msp20I TGGCCA 2 cut(s) 1743, 2578
MspCI CTTAAG 1 cut(s) 1868
MspR9I CCNGG 2 cut(s) 965, 2409
MunI CAATTG 1 cut(s) 1388
Mva1269I GAATGC 1 cut(s) 449
MvaI CCWGG 2 cut(s) 965, 2409
MvnI CGCG 1 cut(s) 2559
MwoI GCNNNNNNNGC 6 cut(s) 125, 1419, 1698, 1952, 1999, 2440
NlaIV GGNNCC 5 cut(s) 1030, 1242, 1693, 2288, 2350
NmeAIII GCCGAG 1 cut(s) 1926
NmuCI GTSAC 3 cut(s) 563, 1054, 1352
NsiI ATGCAT 2 cut(s) 1885, 2493
NspV TTCGAA 1 cut(s) 2143
PagI TCATGA 2 cut(s) 469, 1086
PcsI WCGNNNNNNNCGW 1 cut(s) 783
PctI GAATGC 1 cut(s) 449
PdmI GAANNNNTTC 2 cut(s) 2149, 2340
PfeI GAWTC 8 cut(s) 4, 1316, 1494, 1502, 1820, 1848, 2029, 2302
PflMI CCANNNNNTGG 2 cut(s) 2117, 2296
PfoI TCCNGGA 1 cut(s) 963
PkrI GCNGC 1 cut(s) 294
PleI GAGTC 6 cut(s) 141, 777, 1275, 1676, 2019, 2407
PpsI GAGTC 6 cut(s) 141, 777, 1275, 1676, 2019, 2407
Psp1406I AACGTT 1 cut(s) 1749
Psp6I CCWGG 2 cut(s) 963, 2407
PspEI GGTNACC 1 cut(s) 563
PspGI CCWGG 2 cut(s) 963, 2407
PspN4I GGNNCC 5 cut(s) 1030, 1242, 1693, 2288, 2350
PspPI GGNCC 1 cut(s) 1029
PstI CTGCAG 1 cut(s) 1690
PsuI RGATCY 5 cut(s) 211, 343, 858, 1040, 1571
RsaI GTAC 7 cut(s) 417, 669, 770, 880, 1647, 1971, 2313
RsaNI GTAC 7 cut(s) 416, 668, 769, 879, 1646, 1970, 2312
RseI CAYNNNNRTG 3 cut(s) 561, 687, 2222
SalI GTCGAC 1 cut(s) 827
SatI GCNGC 1 cut(s) 293
Sau96I GGNCC 1 cut(s) 1029
SchI GAGTC 6 cut(s) 141, 777, 1276, 1676, 2020, 2408
ScrFI CCNGG 2 cut(s) 965, 2409
SduI GDGCHC 2 cut(s) 258, 1094
SfaNI GCATC 8 cut(s) 49, 253, 325, 922, 1892, 2012, 2478, 2500
SfcI CTRYAG 3 cut(s) 720, 1609, 1686
SfuI TTCGAA 1 cut(s) 2143
SmiMI CAYNNNNRTG 3 cut(s) 561, 687, 2222
SmlI CTYRAG 1 cut(s) 1868
SmoI CTYRAG 1 cut(s) 1868
SsiI CCGC 6 cut(s) 209, 433, 454, 493, 1233, 1783
SspI AATATT 1 cut(s) 1813
SspMI CTAG 3 cut(s) 408, 843, 2046
StyD4I CCNGG 2 cut(s) 963, 2407
StyI CCWWGG 1 cut(s) 862
TaaI ACNGT 3 cut(s) 541, 1096, 2469
TaiI ACGT 2 cut(s) 255, 1752
TaqI TCGA 2 cut(s) 828, 2143
TaqII GACCGA 1 cut(s) 1301
TatI WGTACW 2 cut(s) 768, 1645
TfiI GAWTC 8 cut(s) 4, 1316, 1494, 1502, 1820, 1848, 2029, 2302
TscAI CASTG 6 cut(s) 403, 544, 895, 1304, 1415, 2506
TseFI GTSAC 3 cut(s) 563, 1054, 1352
TseI GCWGC 1 cut(s) 292
Tsp45I GTSAC 3 cut(s) 563, 1054, 1352
TspDTI ATGAA 9 cut(s) 17, 48, 486, 533, 660, 996, 1218, 1833, 2445
TspGWI ACGGA 2 cut(s) 123, 1078
TspRI CASTG 6 cut(s) 403, 544, 895, 1304, 1415, 2506
Van91I CCANNNNNTGG 2 cut(s) 2117, 2296
Vha464I CTTAAG 1 cut(s) 1868
XapI RAATTY 5 cut(s) 520, 950, 1111, 1451, 2274
XmiI GTMKAC 2 cut(s) 828, 1680
XmnI GAANNNNTTC 2 cut(s) 2149, 2340
XspI CTAG 3 cut(s) 408, 843, 2046
Zsp2I ATGCAT 2 cut(s) 1885, 2493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.