Rw3G022260

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Forward (+)
27241683 .. 27244276
2594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G022260.1

Sequence Viewer

Length: 2550 bp
ATGGCTGAACTTGTCGTTGATTTGGCAAGCAAGCTAACAGAGAGGTTGGGCTCCCTTGCTTACAATGAGATTTGCTTGGCATGGGGAGTCAAAACCGATCTGCAAAAGCTTAAGCGTACCGTGTCCATCATAAAAAATGCGCTCCTTGATGCTGAAGAGAAGCAAGTGAGTGACAAAGGGGTACAAAGTTGGCTGCAACAACTTAAAGATGTGTTCCGCGATGCTGAAGATGTGTTGGATGAGTTTGAGTGCGAAGCTTTGCGGAGGCAAGTTGTAAAAACATATTACAGCACTGCGAGACAGGTACGTCGTTTCTTTTCGCGCTCTAATCCAATTGCTTTTCGACTGAGAGTAGGTCATGAAATCGCTGAGATAAAGGAGAGATTAGATGAGCTTATAGCTAATAAGGCTATATTTGATCATCTCACTGATCATCAAGGTGATCGTCGTGATCATGATAGAAATGTACGGAGCGTGAATGTGAGGAGGGAGAATATGACTCACTCCTTCATTCCTGCTTCAGAGGTTATTGGTAGAGAGTCTGACAAAGAAGTGATTGTAGATCTTCTAATGCCAAAAACTGTTGATCAACATATTGGGAATTCCCAGGGTGTTGTCTCTGTTATTCCCATAGTTGGTATAGGAGGGTTGGGTAAGACCACACTTGCCAAGCTGGTCTACAATGATGAAAGAGTCGTTGGGCATTTCGATTTGAGGATGTGGGTGTATGTGTCAGTGGACTTTGATATTCATAGGTTGATGGAAAAGATTCTTAGTTCTGCACTAGGTACAGAAATTAGTGAGAAGATGTCTGTGGATCAATTACAGGCAAAGTTACGTGGATCTTTAAAGGACAAGAAATATTTGCTTGTCTTGGATGATGTATGGAATGAGGATCGTATTCAATGGAGTGAGTTGAGAAATTTGTTGATAGACGGGATCAAATTAGGAAGTAATATCTTAGTGACAACCCGTAATCAGTCAGTTGCTTCAATCATGGGCACTGTACAACCATACAATTTAGCTGGCCTCTCTTATGGCCATTGTTTGTCATTGTTTACAAAATGTGCATTCAAGGAAGGTGATGAGAAACAGCATCCGCACCTCTTTGAAATTGGAAAAGAGATTGTGAAGAAGTGCGGAGGGGCTCCCTTGGCGGTGAGAACTTTAGGGAGTCAACTGTACTCAGAGACTGATGAGCGTCGATGGAAACGAGTAAGAGATTCTAAGATATGGGAATTGGAGAGAGAGGGTAGTGGTCATATCTTGCCTGCTTTGAGATTGAGTTATACCCAATTGCCTTCATACTTGAAACCATGCCTTGCTTATTGTGCATATCTTCCAAAGCAAGGATTTAATTGTAATTCTGTGGAGTTGATTAATTGTTGGATGGCTCATGGAATCCTTCAATCTCGTGATAATGAGAATCTGGAGATGGAAGATGTTGGGGAGCAATATTTTAAAGAGTTATGGGCGAGATCGTTCTTTGAAAATGTGGACACTCCCGAGCATAACTTTGATAGCCTCTATGAATTTTCTATGCATGATCTTATCTATGACCTTGTACAGTCAATTGGGCAAGATGAGTGGTCTGTTGTGGATTCTAGCACTAAAGACATCGTTGAAAATGTTAGACACTTGTCATTTTTGGAATTTGACAACAAACAAATGGTTTCAATGATGTTGCAAAAGTTAAAAAAAGTGCAGAGCATAACTACCGTGGAAGAGGCGCCTATCGATGAATCCTTCCTTGATACTTGCTTTTCAAAATTTAAATATTTGAGGGTGCTGCGCTTCATTGATTTATCATTGAAGGAGATGCCAAGTTCCATTGGTACGTTAAAGCATTTAAGATATCTGAATTTAGAGGGAGCTGAAATGACAAAACTCCCCAATGCCATTTGCAAGTTGCAGAGCTTGCAAACTCTAATTTTTCCTGCGTGTAAAAATATTCAAGAGTTGCCAAGAGATATGAGCAACTTGATCAGCCTCAGAACGCTTGCATTGACGACGAAAGAAGCATGTTTTCAAGACAATGGAGTGGGATGTTTGAAAGCACTTCGGTTGCTCGGAATTTTCAATTGTATTAATTTAATATCTTTGCCCTGCAAGATGAGCTATCTTGCTGCATTGCAGACTTTGATATTATGTAATTGTAAGGAACTCGATCCGGTGAGCCAACATTATCAAGCAATTCCATTGAAGCTCGAAAAGTTGGCTATTGATGATTTGATGGACTACCACGGATCACGGAGTTGCCTGAATGGTTTCAAGGAGCTGCCAGCACCCTACGGGTGGCTCACAAATCTAACATCACTTAAAAAGCTTGTCCTCAAGAGTTGCCCCAAATTGTTGTCACTTCCGGAAGGGATGGATCGTCTCACTTCCTTGAGAGACTTGAAGATAGAAGATTGTCCCGAGTTGGAGAGAAGATGCAAGCGTGACACTGGTGAAGATTGGCCAAAGATTGCTCGTATTCCAAACCTTTCTATATCAGAGTCAGATTATTCTGAAGGGCCACTCTTTGAAGTGTCAGACGCTGAAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

849

Amino Acids

96.93

Weight (kDa)

5.92

Isoelectric Point (pI)

47.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 10 - 97 4.5e-25 Rx N-terminal domain
NB-ARC PF00931 203 - 360 4.9e-33 NB-ARC domain
WHD_DRP PF23559 451 - 522 7e-17 Disease resistance protein Winged helix domain
LRR_14 PF23598 584 - 692 1.7e-17 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 306
AccB1I GGYRCC 1 cut(s) 1729
AccI GTMKAC 1 cut(s) 678
AccII CGCG 2 cut(s) 219, 322
AccIII TCCGGA 1 cut(s) 2362
AciI CCGC 5 cut(s) 217, 262, 1100, 1140, 1157
AclWI GGATC 7 cut(s) 825, 850, 903, 947, 2162, 2254, 2382
AcoI YGGCCR 2 cut(s) 1039, 2459
AcsI RAATTY 7 cut(s) 601, 922, 1532, 1652, 1769, 1861, 2073
AcuI CTGAAG 4 cut(s) 174, 246, 504, 2532
AcyI GRCGYC 1 cut(s) 1730
AfaI GTAC 9 cut(s) 118, 183, 306, 468, 790, 1008, 1184, 1566, 1837
AfiI CCNNNNNNNGG 3 cut(s) 635, 1349, 2295
AflII CTTAAG 1 cut(s) 110
AjnI CCWGG 1 cut(s) 606
AjuI GAANNNNNNNTTGG 2 cut(s) 681, 713
Alw26I GTCTC 5 cut(s) 292, 622, 1184, 2384, 2388
AlwI GGATC 7 cut(s) 825, 850, 903, 947, 2162, 2254, 2382
AlwNI CAGNNNCTG 2 cut(s) 1193, 2540
Ama87I CYCGRG 2 cut(s) 1505, 2417
Aor13HI TCCGGA 1 cut(s) 2362
AoxI GGCC 4 cut(s) 1027, 1039, 2459, 2516
ApeKI GCWGC 4 cut(s) 193, 1789, 2126, 2278
ApoI RAATTY 7 cut(s) 601, 922, 1532, 1652, 1769, 1861, 2073
AseI ATTAAT 2 cut(s) 1380, 2088
Asp700I GAANNNNTTC 2 cut(s) 768, 2267
AspLEI GCGC 4 cut(s) 142, 324, 1732, 1794
AspS9I GGNCC 1 cut(s) 2516
AsuHPI GGTGA 5 cut(s) 452, 1094, 1171, 2185, 2462
AvaI CYCGRG 2 cut(s) 1505, 2417
BaeGI GKGCMC 1 cut(s) 1004
BalI TGGCCA 2 cut(s) 1041, 2461
BanI GGYRCC 1 cut(s) 1729
BanII GRGCYC 2 cut(s) 53, 1150
BauI CACGAG 1 cut(s) 1413
BbvI GCAGC 4 cut(s) 180, 1776, 2113, 2265
BccI CCATC 7 cut(s) 134, 754, 1200, 1384, 1429, 2227, 2365
BciT130I CCWGG 1 cut(s) 608
BclI TGATCA 5 cut(s) 418, 430, 451, 586, 1983
BcoDI GTCTC 5 cut(s) 292, 622, 1184, 2384, 2388
BfaI CTAG 2 cut(s) 785, 1605
BfoI RGCGCY 1 cut(s) 1733
BfrI CTTAAG 1 cut(s) 110
BglII AGATCT 1 cut(s) 562
BisI GCNGC 4 cut(s) 194, 1790, 2127, 2279
BlsI GCNGC 4 cut(s) 195, 1791, 2128, 2280
Bme1390I CCNGG 1 cut(s) 608
BmeT110I CYCGRG 2 cut(s) 1505, 2417
BmgT120I GGNCC 1 cut(s) 2516
BmiI GGNNCC 3 cut(s) 52, 1149, 1731
BmrFI CCNGG 1 cut(s) 608
BmsI GCATC 5 cut(s) 139, 211, 1105, 1809, 2423
BoxI GACNNNNGTC 1 cut(s) 1639
BpmI CTGGAG 1 cut(s) 1451
BpuEI CTTGAG 2 cut(s) 2318, 2410
Bsa29I ATCGAT 1 cut(s) 1737
BsaAI YACGTR 1 cut(s) 839
BsaHI GRCGYC 1 cut(s) 1730
BsaJI CCNNGG 5 cut(s) 606, 607, 1152, 1719, 2242
BsaWI WCCGGW 2 cut(s) 2170, 2362
Bsc4I CCNNNNNNNGG 3 cut(s) 635, 1349, 2295
Bse1I ACTGG 1 cut(s) 2452
Bse3DI GCAATG 1 cut(s) 2129
BseAI TCCGGA 1 cut(s) 2362
BseBI CCWGG 1 cut(s) 608
BseCI ATCGAT 1 cut(s) 1737
BseDI CCNNGG 5 cut(s) 606, 607, 1152, 1719, 2242
BseGI GGATG 7 cut(s) 244, 723, 883, 1096, 1395, 2051, 2376
BseLI CCNNNNNNNGG 3 cut(s) 635, 1349, 2295
BseMI GCAATG 1 cut(s) 2129
BseMII CTCAG 4 cut(s) 338, 360, 1200, 2005
BseNI ACTGG 1 cut(s) 2452
BseRI GAGGAG 1 cut(s) 499
BseSI GKGCMC 1 cut(s) 1004
BseXI GCAGC 4 cut(s) 180, 1776, 2113, 2265
BsgI GTGCAG 2 cut(s) 765, 1724
Bsh1236I CGCG 2 cut(s) 219, 322
BshFI GGCC 4 cut(s) 1029, 1041, 2461, 2518
BshNI GGYRCC 1 cut(s) 1729
BshVI ATCGAT 1 cut(s) 1737
BsiHKCI CYCGRG 2 cut(s) 1505, 2417
BsiSI CCGG 2 cut(s) 2171, 2363
BslFI GGGAC 1 cut(s) 2400
BslI CCNNNNNNNGG 3 cut(s) 635, 1349, 2295
BsmAI GTCTC 5 cut(s) 292, 622, 1184, 2384, 2388
BsmBI CGTCTC 1 cut(s) 2384
BsmFI GGGAC 1 cut(s) 2400
BsmI GAATGC 1 cut(s) 1070
BsnI GGCC 4 cut(s) 1029, 1041, 2461, 2518
BsoBI CYCGRG 2 cut(s) 1505, 2417
Bsp1286I GDGCHC 3 cut(s) 53, 1004, 1150
Bsp13I TCCGGA 1 cut(s) 2362
Bsp1407I TGTACA 2 cut(s) 1006, 1564
BspACI CCGC 5 cut(s) 217, 262, 1100, 1140, 1157
BspANI GGCC 4 cut(s) 1029, 1041, 2461, 2518
BspCNI CTCAG 4 cut(s) 339, 361, 1199, 2004
BspDI ATCGAT 1 cut(s) 1737
BspEI TCCGGA 1 cut(s) 2362
BspFNI CGCG 2 cut(s) 219, 322
BspHI TCATGA 2 cut(s) 358, 454
BspLI GGNNCC 3 cut(s) 52, 1149, 1731
BspPI GGATC 7 cut(s) 825, 850, 903, 947, 2162, 2254, 2382
BspT107I GGYRCC 1 cut(s) 1729
BspTI CTTAAG 1 cut(s) 110
BsrDI GCAATG 1 cut(s) 2129
BsrGI TGTACA 2 cut(s) 1006, 1564
BsrI ACTGG 1 cut(s) 2452
BssECI CCNNGG 5 cut(s) 606, 607, 1152, 1719, 2242
BssNI GRCGYC 1 cut(s) 1730
BssSI CACGAG 1 cut(s) 1413
BssT1I CCWWGG 1 cut(s) 1152
Bst2BI CACGAG 1 cut(s) 1413
Bst2UI CCWGG 1 cut(s) 608
Bst4CI ACNGT 6 cut(s) 121, 583, 1006, 1182, 1569, 1720
Bst6I CTCTTC 3 cut(s) 150, 1719, 2538
BstACI GRCGYC 1 cut(s) 1730
BstAFI CTTAAG 1 cut(s) 110
BstAPI GCANNNNNTGC 1 cut(s) 1918
BstAUI TGTACA 2 cut(s) 1006, 1564
BstBAI YACGTR 1 cut(s) 839
BstC8I GCNNGC 8 cut(s) 28, 32, 1027, 1272, 1919, 2001, 2283, 2438
BstDEI CTNAG 7 cut(s) 347, 369, 773, 961, 1186, 1227, 1991
BstDSI CCRYGG 2 cut(s) 1719, 2242
BstF5I GGATG 7 cut(s) 244, 723, 883, 1096, 1395, 2051, 2376
BstFNI CGCG 2 cut(s) 219, 322
BstH2I RGCGCY 1 cut(s) 1733
BstHHI GCGC 4 cut(s) 142, 324, 1732, 1794
BstMAI GTCTC 5 cut(s) 292, 622, 1184, 2384, 2388
BstMWI GCNNNNNNNGC 5 cut(s) 407, 1154, 1331, 1918, 2115
BstNI CCWGG 1 cut(s) 608
BstNSI RCATGY 1 cut(s) 2025
BstPAI GACNNNNGTC 1 cut(s) 1639
BstSCI CCNGG 1 cut(s) 606
BstSLI GKGCMC 1 cut(s) 1004
BstUI CGCG 2 cut(s) 219, 322
BstV1I GCAGC 4 cut(s) 180, 1776, 2113, 2265
BstX2I RGATCY 2 cut(s) 562, 842
BstYI RGATCY 2 cut(s) 562, 842
Bsu15I ATCGAT 1 cut(s) 1737
BsuRI GGCC 4 cut(s) 1029, 1041, 2461, 2518
BsuTUI ATCGAT 1 cut(s) 1737
BtgI CCRYGG 2 cut(s) 1719, 2242
BtgZI GCGATG 1 cut(s) 234
BtsCI GGATG 7 cut(s) 244, 723, 883, 1096, 1395, 2051, 2376
BtsI GCAGTG 1 cut(s) 291
BtsIMutI CAGTG 5 cut(s) 291, 426, 741, 1002, 2445
Cac8I GCNNGC 8 cut(s) 28, 32, 1027, 1272, 1919, 2001, 2283, 2438
CaiI CAGNNNCTG 2 cut(s) 1193, 2540
CciI TCATGA 2 cut(s) 358, 454
CfoI GCGC 4 cut(s) 142, 324, 1732, 1794
Cfr13I GGNCC 1 cut(s) 2516
ClaI ATCGAT 1 cut(s) 1737
CseI GACGC 1 cut(s) 1190
Csp6I GTAC 9 cut(s) 117, 182, 305, 467, 789, 1007, 1183, 1565, 1836
CspCI CAANNNNNGTGG 2 cut(s) 1568, 1603
CviAII CATG 8 cut(s) 81, 359, 455, 997, 1317, 1397, 1544, 2022
CviQI GTAC 9 cut(s) 117, 182, 305, 467, 789, 1007, 1183, 1565, 1836
DdeI CTNAG 7 cut(s) 347, 369, 773, 961, 1186, 1227, 1991
DinI GGCGCC 1 cut(s) 1731
DraI TTTAAA 3 cut(s) 849, 1462, 1774
DrdI GACNNNNNNGTC 1 cut(s) 306
DseDI GACNNNNNNGTC 1 cut(s) 306
EaeI YGGCCR 2 cut(s) 1039, 2459
Eam1104I CTCTTC 3 cut(s) 150, 1719, 2538
EarI CTCTTC 3 cut(s) 150, 1719, 2538
Eco130I CCWWGG 1 cut(s) 1152
Eco24I GRGCYC 2 cut(s) 53, 1150
Eco32I GATATC 1 cut(s) 1856
Eco57I CTGAAG 4 cut(s) 174, 246, 504, 2532
Eco88I CYCGRG 2 cut(s) 1505, 2417
EcoRI GAATTC 1 cut(s) 601
EcoRII CCWGG 1 cut(s) 606
EcoRV GATATC 1 cut(s) 1856
EcoT14I CCWWGG 1 cut(s) 1152
EcoT22I ATGCAT 1 cut(s) 1545
EcoT38I GRGCYC 2 cut(s) 53, 1150
EgeI GGCGCC 1 cut(s) 1731
EheI GGCGCC 1 cut(s) 1731
ErhI CCWWGG 1 cut(s) 1152
Esp3I CGTCTC 1 cut(s) 2384
FaeI CATG 8 cut(s) 84, 362, 458, 1000, 1320, 1400, 1547, 2025
FaqI GGGAC 1 cut(s) 2400
FatI CATG 8 cut(s) 80, 358, 454, 996, 1316, 1396, 1543, 2021
FbaI TGATCA 5 cut(s) 418, 430, 451, 586, 1983
FblI GTMKAC 1 cut(s) 678
Fnu4HI GCNGC 4 cut(s) 194, 1790, 2127, 2279
FokI GGATG 7 cut(s) 251, 730, 890, 1083, 1402, 2058, 2383
FriOI GRGCYC 2 cut(s) 53, 1150
Fsp4HI GCNGC 4 cut(s) 194, 1790, 2127, 2279
FspBI CTAG 2 cut(s) 785, 1605
GlaI GCGC 4 cut(s) 141, 323, 1731, 1793
GluI GCNGC 4 cut(s) 194, 1790, 2127, 2279
GsuI CTGGAG 1 cut(s) 1451
HaeII RGCGCY 1 cut(s) 1733
HaeIII GGCC 4 cut(s) 1029, 1041, 2461, 2518
HapII CCGG 2 cut(s) 2171, 2363
HgaI GACGC 1 cut(s) 1190
HhaI GCGC 4 cut(s) 142, 324, 1732, 1794
Hin1I GRCGYC 1 cut(s) 1730
Hin1II CATG 8 cut(s) 84, 362, 458, 1000, 1320, 1400, 1547, 2025
Hin6I GCGC 4 cut(s) 140, 322, 1730, 1792
HinP1I GCGC 4 cut(s) 140, 322, 1730, 1792
HincII GTYRAC 1 cut(s) 1178
HindII GTYRAC 1 cut(s) 1178
HindIII AAGCTT 3 cut(s) 107, 255, 2324
HpaII CCGG 2 cut(s) 2171, 2363
HphI GGTGA 5 cut(s) 452, 1094, 1171, 2185, 2462
Hpy166II GTNNAC 5 cut(s) 679, 739, 1059, 1178, 1498
Hpy8I GTNNAC 5 cut(s) 679, 739, 1059, 1178, 1498
Hpy99I CGWCG 4 cut(s) 312, 450, 1206, 2014
HpyAV CCTTC 8 cut(s) 517, 1073, 1311, 1415, 1756, 1807, 2360, 2507
HpyCH4III ACNGT 6 cut(s) 121, 583, 1006, 1182, 1569, 1720
HpyCH4IV ACGT 3 cut(s) 307, 838, 1838
HpyF10VI GCNNNNNNNGC 5 cut(s) 407, 1154, 1331, 1918, 2115
HpyF3I CTNAG 7 cut(s) 347, 369, 773, 961, 1186, 1227, 1991
HpySE526I ACGT 3 cut(s) 307, 838, 1838
Hsp92I GRCGYC 1 cut(s) 1730
Hsp92II CATG 8 cut(s) 84, 362, 458, 1000, 1320, 1400, 1547, 2025
HspAI GCGC 4 cut(s) 140, 322, 1730, 1792
KasI GGCGCC 1 cut(s) 1729
Kpn2I TCCGGA 1 cut(s) 2362
Ksp22I TGATCA 5 cut(s) 418, 430, 451, 586, 1983
LmnI GCTCC 7 cut(s) 56, 147, 471, 1153, 1450, 1871, 2275
Lsp1109I GCAGC 4 cut(s) 180, 1776, 2113, 2265
LweI GCATC 5 cut(s) 139, 211, 1105, 1809, 2423
MaeI CTAG 2 cut(s) 785, 1605
MaeII ACGT 3 cut(s) 307, 838, 1838
MaeIII GTNAC 5 cut(s) 170, 834, 964, 2355, 2441
MfeI CAATTG 4 cut(s) 333, 1295, 1572, 2080
MflI RGATCY 2 cut(s) 562, 842
MhlI GDGCHC 3 cut(s) 53, 1004, 1150
MlsI TGGCCA 2 cut(s) 1041, 2461
MluNI TGGCCA 2 cut(s) 1041, 2461
Mly113I GGCGCC 1 cut(s) 1730
MlyI GAGTC 6 cut(s) 96, 493, 548, 702, 1183, 2507
MmeI TCCRAC 3 cut(s) 216, 1367, 2403
Mox20I TGGCCA 2 cut(s) 1041, 2461
Mph1103I ATGCAT 1 cut(s) 1545
MroI TCCGGA 1 cut(s) 2362
MroXI GAANNNNTTC 2 cut(s) 768, 2267
MscI TGGCCA 2 cut(s) 1041, 2461
MslI CAYNNNNRTG 1 cut(s) 438
Msp20I TGGCCA 2 cut(s) 1041, 2461
MspCI CTTAAG 1 cut(s) 110
MspI CCGG 2 cut(s) 2171, 2363
MspR9I CCNGG 1 cut(s) 608
MunI CAATTG 4 cut(s) 333, 1295, 1572, 2080
Mva1269I GAATGC 1 cut(s) 1070
MvaI CCWGG 1 cut(s) 608
MvnI CGCG 2 cut(s) 219, 322
MwoI GCNNNNNNNGC 5 cut(s) 407, 1154, 1331, 1918, 2115
NarI GGCGCC 1 cut(s) 1730
NlaIII CATG 8 cut(s) 84, 362, 458, 1000, 1320, 1400, 1547, 2025
NlaIV GGNNCC 3 cut(s) 52, 1149, 1731
NmuCI GTSAC 4 cut(s) 170, 964, 2355, 2441
NsiI ATGCAT 1 cut(s) 1545
NspI RCATGY 1 cut(s) 2025
PagI TCATGA 2 cut(s) 358, 454
PasI CCCWGGG 1 cut(s) 607
PcsI WCGNNNNNNNCGW 1 cut(s) 1210
PctI GAATGC 1 cut(s) 1070
PdmI GAANNNNTTC 2 cut(s) 768, 2267
PfeI GAWTC 6 cut(s) 769, 1223, 1401, 1426, 1601, 1742
PkrI GCNGC 4 cut(s) 195, 1791, 2128, 2280
PleI GAGTC 6 cut(s) 95, 493, 547, 701, 1182, 2506
PluTI GGCGCC 1 cut(s) 1733
PpsI GAGTC 6 cut(s) 95, 493, 547, 701, 1182, 2506
Ppu21I YACGTR 1 cut(s) 839
PshAI GACNNNNGTC 1 cut(s) 1639
PshBI ATTAAT 2 cut(s) 1380, 2088
Psp6I CCWGG 1 cut(s) 606
PspGI CCWGG 1 cut(s) 606
PspN4I GGNNCC 3 cut(s) 52, 1149, 1731
PspPI GGNCC 1 cut(s) 2516
PstNI CAGNNNCTG 2 cut(s) 1193, 2540
PsuI RGATCY 2 cut(s) 562, 842
RsaI GTAC 9 cut(s) 118, 183, 306, 468, 790, 1008, 1184, 1566, 1837
RsaNI GTAC 9 cut(s) 117, 182, 305, 467, 789, 1007, 1183, 1565, 1836
RseI CAYNNNNRTG 1 cut(s) 438
SatI GCNGC 4 cut(s) 194, 1790, 2127, 2279
Sau96I GGNCC 1 cut(s) 2516
SchI GAGTC 6 cut(s) 96, 493, 548, 702, 1183, 2507
ScrFI CCNGG 1 cut(s) 608
SduI GDGCHC 3 cut(s) 53, 1004, 1150
SfaNI GCATC 5 cut(s) 139, 211, 1105, 1809, 2423
SfoI GGCGCC 1 cut(s) 1731
SmiI ATTTAAAT 1 cut(s) 1774
SmiMI CAYNNNNRTG 1 cut(s) 438
SmlI CTYRAG 3 cut(s) 110, 2333, 2389
SmoI CTYRAG 3 cut(s) 110, 2333, 2389
SsiI CCGC 5 cut(s) 217, 262, 1100, 1140, 1157
SspDI GGCGCC 1 cut(s) 1729
SspI AATATT 4 cut(s) 863, 1457, 1778, 1951
SspMI CTAG 2 cut(s) 785, 1605
StyD4I CCNGG 1 cut(s) 606
StyI CCWWGG 1 cut(s) 1152
SwaI ATTTAAAT 1 cut(s) 1774
TaaI ACNGT 6 cut(s) 121, 583, 1006, 1182, 1569, 1720
TaiI ACGT 3 cut(s) 310, 841, 1841
TaqI TCGA 6 cut(s) 343, 708, 1204, 1737, 2166, 2208
TatI WGTACW 3 cut(s) 1006, 1182, 1564
TfiI GAWTC 6 cut(s) 769, 1223, 1401, 1426, 1601, 1742
TscAI CASTG 5 cut(s) 298, 433, 741, 1009, 2452
TseFI GTSAC 4 cut(s) 170, 964, 2355, 2441
TseI GCWGC 4 cut(s) 193, 1789, 2126, 2278
Tsp45I GTSAC 4 cut(s) 170, 964, 2355, 2441
TspDTI ATGAA 8 cut(s) 375, 499, 702, 740, 1293, 1545, 1755, 1786
TspGWI ACGGA 3 cut(s) 484, 2259, 2266
TspRI CASTG 5 cut(s) 298, 433, 741, 1009, 2452
Vha464I CTTAAG 1 cut(s) 110
VspI ATTAAT 2 cut(s) 1380, 2088
XapI RAATTY 7 cut(s) 601, 922, 1532, 1652, 1769, 1861, 2073
XceI RCATGY 1 cut(s) 2025
XmiI GTMKAC 1 cut(s) 678
XmnI GAANNNNTTC 2 cut(s) 768, 2267
XspI CTAG 2 cut(s) 785, 1605
Zsp2I ATGCAT 1 cut(s) 1545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.