MD17G1030800.v1.1

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
2216557 .. 2220439
3883 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1030800.v1.1.491

Sequence Viewer

Length: 3177 bp
ATGGCCGAAGGAGTTCTCTTCAACATTACAGAACGGATCATTGTAAGGCTTGGCAGCCGTGCTTTCCAAACGATTGGATCGATTTGGGGTGTCCAAGATGAGCTCAACAAGCTCAAGGAGACGGTTGCCGGATTCCAAGCTATTCTTCTTGACGCTGAGCAAAAGCAAGCCAACAACAATGAAGTAAAACTGTGGCTCGAAAGCGTAGAAGATGCAGTTTATGAAGCCGATGACGTGCTGGATGAGTTTAATACTGAAGTTCAACGAAGACAAGTGATGCGTGACAATGCTAAGCTGTCAAAGGAGGTGTGCATTTTCTTTTCTAGCTCAAATCAACTTGTTTTTGGGCTGAAAATGAGTCATAAGATAAAAGATATTAACGAGAGGCTTCGTGAGGTTGCATCTCGTAGAACTTTTCACTTAGAAGTAGATCGTGAAGATACACCATTTAAAAGGAGAGAGAGGGTCACTCACTCATTTGTACCTAAAGAAAATATTATTATAGGGAGAGAGAAAGATAAAAAGGCAATTGTCCAACTCTTGTTGGATCCCATCTCAACTGAGAATGTGTGTTCCATTTCCATAGTTGGATTTGGAGGATTGGGAAAAACTGCACTTGCCCAACTCATATTCAACGATGAGGTGGTTCAAAATCATTTTGAGTTGAAAATATGGACATGTGTTTCTAATGCATTTGAGTTGGATATAGTTGTTAAGAAAATCCTTCAATCCGAACATAATGGGATAGAGCAGTTGCAAAATGAACTTAGGAGAAAAGTAGATGGGAAGAAGTACCTACTTGTGCTGGATGATATGTGGAATGAGGATCGAGAGAAATGGCTTAGCTTGAAGTACTTGTTAATGGGTGGCGGAAAAGGTAGTAAAATCCTAATAACCACTCGTAGTGAAATCGTTGGGACGACATCAGACACAGCTAAACCATACACCTTAAGGGGCTTGGATGAAAAGCAAAGTTGGTCTTTATTTAAGGAAATGGCTTTTATAGATGGAAAAGAGCCAGAGAATTCAACAATTAAGGAAGTTGGGATGGAGGTTGCAAGAAAATGTCAGGGAGTTCCACTCGCTATAAGGACGATAGGTGGGATGTTGCGCACCAAACATCACGAAAGAGAATGGTTGTATTTCAAAGAAAAGAAACTTTCAAAAATAAGCCAAAAAGAAAATGAAATTTTACCAACACTTAAATTGAGTTATGATGTGCTCCCATCACATTTGAAGCATTGTTTTGCTTATTGTAGCTTGTTTCCACCTGATTATAAGATCTATGTACATAAATTGATTCAATTTTGGGTGGCGCAAGGGTTCGTTAAGTCATCCGACGAAAACGAGTGTTTGGAGGATGTTGCGTATGAATATTACAATGAATTCTTGTGCAGATCATTTTTTCAAGAAGAAAAAGAAGATGAGTTTGGTAAAAGTTGTAAAATGCACGATCTCATGAATGAACTTGCAATCTTAGTGTCGGGGGTTGAAAGTGTCGTAGTTGAACCGAACCAAAAGAATTTTCATGAAAAGCTTCGTCATGTATCTTTCAATTTTGATATTAATTTGTCAAAATGGGAAGTGCCAACTTCCTTGCTAAAAGCATGCAAGATACGAACTTTTCTTTTGCTTTGCCAAAGGAGTTTGAGTGATATTGATGGGTCATCATGTGATTCATTTTGTGCTACAATTGTTTCAAATTTTAAGTCATTGCGGATGTTGAGTCTAAATGAATTAGGAATTAAAAAGGTGCCTAATTGTCTTAAAAAAATGAAACATTTGAGATATCTTGATCTTAGTGGTAATCCCATCAAGAGAATTCCAGATTGGATAGTTGGACTGTCGAATTTGGAAACACTAGATCTCACACTCTGTGGTGGGCTTGAGGAATTGCCTAGAGACATTAAAAAAATGATCAACTTAAGGCATCTCATCTTGAAAATGTGTAATGGATTGAGCGGAATGCCACGTGGAATTGGTGAATTGAAAGGTGTTTGTACATTGAATAGATTTGTTTTGAGGGAAAGCAATTGTTTGTGGAGGGGCGGTAGTGCTGGTCTTGGTGAGCTGGGGACCCTTAAGGAATTAAGGGGAGACTTGGTCATAAAGAATTTGAGGCATGTGGTGTCAGAGTCAAATGTTGGTACACCTTGCAAGGACAAACAACATCTCCATTCGTTAGGATTGTACTGGAAAGAGGGAGAAGATGTAAGCGCAGCTGATGAGGAGGATATTATAAAGTCAATGGAAGTATTGCAACCCCATTCAAATCTAAAGCAGTTGACAGTGTGGTACTATCGTGGTGTGAGGTTTGCGAGTTGGTTTTCTTGTCTCTTAAATATTGTTAATCTCGGATTGTATGGCTGTAAGAGATGCCAACATCTTCCACCCTTGGATCATTTGCCTTTCCTTAAGAAACTTGATCTTCGTGGGTTGGAGAAGTTGGAGTACATATTACTATCAGAGAATGAGAGCAGTAATAGTATGAGTGATGAGATGATGAGGATCTCATTCTTTCCCTCCTTGGAGGAACTCCACATTTACAGATGCCCTGTTCTGAAGGGATGGTGGAGGGCGCACACTCATAACAGTGCTTCTTCTTCATCATCAACGGAAAATCTGTCCTTGCCTTCTTTTCCCTGTCTTTCCAACTTGTCCATCATTGATTGTCCTAATCTAACTTCCATGCCTCTGTATCCAAATGTGGTTGAGATACTACTCAGCTGCTCCAGCTGGAAGGTTGTTTATTCCTTATTTGTTAGAGGAGCATCTGATATTACACATGATGTTGGTGTTGATGTTTCTGCCTCTTCTTCTTCCCATCATCCCTCCAAATTAACTTATCTGTCACTCCGTGGAATTGAAGATTTGGCATCACTGCCAGAAGAAATAAGCAATCTCACGTCACTGCAGTTTCTTCAAATTATTCAGTGCTCTAATTTGGCATCACTGCCAGAAGGGATTCGTGGACTCCCCTGTTTAAATACGTTGGTAATTTGGGATTGCCCCGTGTTAAGCGAAAGATGCAAGATAGAAACAGATGCCATGCCATGTGGATCAAAGATTTCGTCGTCCACACTTTCAACTTTAATTATTTTTATCAATCTCTTTATTTTCCTTATTGATTGCTTGGAGTGGTTGTATATGATTTTTCTTTTGATCATCAGGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1059

Amino Acids

120.5

Weight (kDa)

6.49

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 14 - 97 8.4e-21 Rx N-terminal domain
NB-ARC PF00931 171 - 334 2e-27 NB-ARC domain
WHD_DRP PF23559 421 - 491 3.3e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 564 - 851 5e-23 Leucine-rich repeat region
LRR_4 PF12799 570 - 610 7e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 571 - 624 2.5e-07 Leucine rich repeat
LRR_4 PF12799 593 - 624 9.3e-06 Leucine Rich repeats (2 copies)
LRR_R13L1-DRL21 PF25019 688 - 812 8.4e-31 R13L1/DRL21 LRRs
LRR_14 PF23598 946 - 1001 4.7e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000725)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1278, 2240
Acc16I TGCGCA 1 cut(s) 1112
AccB1I GGYRCC 1 cut(s) 1753
AccBSI CCGCTC 1 cut(s) 1962
AciI CCGC 4 cut(s) 870, 1717, 1962, 2049
AclWI GGATC 8 cut(s) 44, 85, 542, 555, 834, 2406, 2516, 3067
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 8 cut(s) 1024, 1188, 1385, 1522, 1702, 1821, 1849, 2113
AcuI CTGAAG 2 cut(s) 276, 2582
AcvI CACGTG 1 cut(s) 1973
AdeI CACNNNGTG 2 cut(s) 1877, 2858
AfaI GTAC 9 cut(s) 483, 794, 854, 1290, 2002, 2149, 2192, 2297, 2453
AflII CTTAAG 4 cut(s) 949, 1924, 2081, 2414
AflIII ACRYGT 1 cut(s) 677
AjiI CACGTC 2 cut(s) 235, 2907
AjuI GAANNNNNNNTTGG 8 cut(s) 129, 161, 1413, 1445, 1509, 1541, 1813, 1845
Alw21I GWGCWC 3 cut(s) 105, 1224, 2939
Alw26I GTCTC 4 cut(s) 113, 1896, 2091, 2339
AlwI GGATC 8 cut(s) 44, 85, 542, 555, 834, 2406, 2516, 3067
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 3 cut(s) 54, 2219, 2727
ApoI RAATTY 8 cut(s) 1024, 1188, 1385, 1522, 1702, 1821, 1849, 2113
ArsI GACNNNNNNTTYG 4 cut(s) 1694, 1726, 3056, 3088
AseI ATTAAT 1 cut(s) 1566
Asp700I GAANNNNTTC 3 cut(s) 12, 1536, 2964
AspLEI GCGC 4 cut(s) 1113, 1318, 2219, 2581
AspS9I GGNCC 1 cut(s) 2076
AsuHPI GGTGA 2 cut(s) 1994, 2078
AvaII GGWCC 1 cut(s) 2076
BaeI ACNNNNGTAYC 2 cut(s) 2287, 2320
BamHI GGATCC 1 cut(s) 547
BanI GGYRCC 1 cut(s) 1753
BanII GRGCYC 1 cut(s) 105
BarI GAAGNNNNNNTAC 2 cut(s) 2435, 2467
BbrPI CACGTG 1 cut(s) 1973
BbsI GAAGAC 1 cut(s) 274
Bbv12I GWGCWC 3 cut(s) 105, 1224, 2939
BbvI GCAGC 3 cut(s) 66, 2231, 2714
BceAI ACGGC 1 cut(s) 42
BciVI GTATCC 1 cut(s) 2709
BclI TGATCA 2 cut(s) 1917, 3162
BcoDI GTCTC 4 cut(s) 113, 1896, 2091, 2339
BfaI CTAG 3 cut(s) 324, 1862, 1899
BfmI CTRYAG 1 cut(s) 2912
BfrI CTTAAG 4 cut(s) 949, 1924, 2081, 2414
BfuI GTATCC 1 cut(s) 2709
BglII AGATCT 2 cut(s) 1281, 1864
BisI GCNGC 3 cut(s) 55, 2220, 2728
BlpI GCTNAGC 3 cut(s) 156, 291, 842
BlsI GCNGC 3 cut(s) 56, 2221, 2729
BmcAI AGTACT 1 cut(s) 854
Bme18I GGWCC 1 cut(s) 2076
BmgBI CACGTC 2 cut(s) 235, 2907
BmgT120I GGNCC 1 cut(s) 2076
BmiI GGNNCC 4 cut(s) 549, 1755, 2077, 2078
BpiI GAAGAC 1 cut(s) 274
BplI GAGNNNNNCTC 4 cut(s) 454, 486, 1065, 1097
BpmI CTGGAG 1 cut(s) 2716
Bpu1102I GCTNAGC 3 cut(s) 156, 291, 842
BpuEI CTTGAG 2 cut(s) 98, 1907
Bsa29I ATCGAT 1 cut(s) 80
BsaAI YACGTR 1 cut(s) 1973
BsaBI GATNNNNATC 1 cut(s) 2507
BsaJI CCNNGG 3 cut(s) 2394, 2526, 2857
Bse1I ACTGG 1 cut(s) 2198
Bse3DI GCAATG 1 cut(s) 1712
Bse8I GATNNNNATC 1 cut(s) 2507
BseCI ATCGAT 1 cut(s) 80
BseDI CCNNGG 3 cut(s) 2394, 2526, 2857
BseJI GATNNNNATC 1 cut(s) 2507
BseMI GCAATG 1 cut(s) 1712
BseMII CTCAG 3 cut(s) 147, 552, 2737
BseNI ACTGG 1 cut(s) 2198
BseRI GAGGAG 2 cut(s) 2243, 2781
BseXI GCAGC 3 cut(s) 66, 2231, 2714
BseYI CCCAGC 1 cut(s) 2071
BsgI GTGCAG 2 cut(s) 597, 1414
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 1753
BshVI ATCGAT 1 cut(s) 80
BsiHKAI GWGCWC 3 cut(s) 105, 1224, 2939
BsiSI CCGG 1 cut(s) 129
BslFI GGGAC 2 cut(s) 931, 2089
BsmAI GTCTC 4 cut(s) 113, 1896, 2091, 2339
BsmBI CGTCTC 1 cut(s) 113
BsmFI GGGAC 2 cut(s) 931, 2089
BsmI GAATGC 1 cut(s) 1971
BsnI GGCC 1 cut(s) 5
Bsp1286I GDGCHC 3 cut(s) 105, 1224, 2939
Bsp1407I TGTACA 2 cut(s) 1288, 2000
Bsp1720I GCTNAGC 3 cut(s) 156, 291, 842
BspACI CCGC 4 cut(s) 870, 1717, 1962, 2049
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 3 cut(s) 148, 553, 2736
BspDI ATCGAT 1 cut(s) 80
BspHI TCATGA 2 cut(s) 1458, 1528
BspLI GGNNCC 4 cut(s) 549, 1755, 2077, 2078
BspMAI CTGCAG 1 cut(s) 2916
BspPI GGATC 8 cut(s) 44, 85, 542, 555, 834, 2406, 2516, 3067
BspT107I GGYRCC 1 cut(s) 1753
BspTI CTTAAG 4 cut(s) 949, 1924, 2081, 2414
BsrBI CCGCTC 1 cut(s) 1962
BsrDI GCAATG 1 cut(s) 1712
BsrGI TGTACA 2 cut(s) 1288, 2000
BsrI ACTGG 1 cut(s) 2198
BssECI CCNNGG 3 cut(s) 2394, 2526, 2857
BssT1I CCWWGG 2 cut(s) 2394, 2526
Bst4CI ACNGT 5 cut(s) 124, 192, 1845, 2290, 2594
Bst6I CTCTTC 2 cut(s) 23, 2818
BstAFI CTTAAG 4 cut(s) 949, 1924, 2081, 2414
BstAUI TGTACA 2 cut(s) 1288, 2000
BstBAI YACGTR 1 cut(s) 1973
BstC8I GCNNGC 2 cut(s) 168, 1609
BstDEI CTNAG 9 cut(s) 156, 291, 421, 561, 767, 842, 1477, 1799, 2723
BstDSI CCRYGG 1 cut(s) 2857
BstHHI GCGC 4 cut(s) 1113, 1318, 2219, 2581
BstMAI GTCTC 4 cut(s) 113, 1896, 2091, 2339
BstMWI GCNNNNNNNGC 3 cut(s) 109, 2733, 3027
BstNSI RCATGY 3 cut(s) 681, 1611, 2126
BstSFI CTRYAG 1 cut(s) 2912
BstV1I GCAGC 3 cut(s) 66, 2231, 2714
BstV2I GAAGAC 1 cut(s) 274
BstX2I RGATCY 4 cut(s) 547, 1281, 1864, 2508
BstXI CCANNNNNNTGG 1 cut(s) 74
BstYI RGATCY 4 cut(s) 547, 1281, 1864, 2508
Bsu15I ATCGAT 1 cut(s) 80
BsuI GTATCC 1 cut(s) 2709
BsuRI GGCC 1 cut(s) 5
BsuTUI ATCGAT 1 cut(s) 80
BtgI CCRYGG 1 cut(s) 2857
BtrI CACGTC 2 cut(s) 235, 2907
BtsI GCAGTG 3 cut(s) 2879, 2909, 2951
BtsIMutI CAGTG 6 cut(s) 2295, 2599, 2879, 2909, 2939, 2951
Cac8I GCNNGC 2 cut(s) 168, 1609
CciI TCATGA 2 cut(s) 1458, 1528
CfoI GCGC 4 cut(s) 1113, 1318, 2219, 2581
Cfr13I GGNCC 1 cut(s) 2076
ClaI ATCGAT 1 cut(s) 80
CseI GACGC 1 cut(s) 161
Csp6I GTAC 9 cut(s) 482, 793, 853, 1289, 2001, 2148, 2191, 2296, 2452
CviQI GTAC 9 cut(s) 482, 793, 853, 1289, 2001, 2148, 2191, 2296, 2452
DdeI CTNAG 9 cut(s) 156, 291, 421, 561, 767, 842, 1477, 1799, 2723
DraI TTTAAA 2 cut(s) 451, 2985
DraIII CACNNNGTG 2 cut(s) 1877, 2858
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 23, 2818
EarI CTCTTC 2 cut(s) 23, 2818
EciI GGCGGA 1 cut(s) 885
Ecl136II GAGCTC 1 cut(s) 103
Eco130I CCWWGG 2 cut(s) 2394, 2526
Eco24I GRGCYC 1 cut(s) 105
Eco32I GATATC 1 cut(s) 1790
Eco47I GGWCC 1 cut(s) 2076
Eco53kI GAGCTC 1 cut(s) 103
Eco57I CTGAAG 2 cut(s) 276, 2582
Eco72I CACGTG 1 cut(s) 1973
EcoICRI GAGCTC 1 cut(s) 103
EcoO109I RGGNCCY 1 cut(s) 2076
EcoRI GAATTC 3 cut(s) 1024, 1385, 1821
EcoRV GATATC 1 cut(s) 1790
EcoT14I CCWWGG 2 cut(s) 2394, 2526
EcoT22I ATGCAT 1 cut(s) 694
EcoT38I GRGCYC 1 cut(s) 105
ErhI CCWWGG 2 cut(s) 2394, 2526
Esp3I CGTCTC 1 cut(s) 113
FalI AAGNNNNNCTT 4 cut(s) 129, 161, 964, 996
FaqI GGGAC 2 cut(s) 931, 2089
FbaI TGATCA 2 cut(s) 1917, 3162
Fnu4HI GCNGC 3 cut(s) 55, 2220, 2728
FriOI GRGCYC 1 cut(s) 105
Fsp4HI GCNGC 3 cut(s) 55, 2220, 2728
FspBI CTAG 3 cut(s) 324, 1862, 1899
FspI TGCGCA 1 cut(s) 1112
GlaI GCGC 4 cut(s) 1112, 1317, 2218, 2580
GluI GCNGC 3 cut(s) 55, 2220, 2728
GsaI CCCAGC 1 cut(s) 2075
GsuI CTGGAG 1 cut(s) 2716
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 129
HgaI GACGC 1 cut(s) 161
HhaI GCGC 4 cut(s) 1113, 1318, 2219, 2581
Hin6I GCGC 4 cut(s) 1111, 1316, 2217, 2579
HinP1I GCGC 4 cut(s) 1111, 1316, 2217, 2579
HincII GTYRAC 1 cut(s) 2286
HindII GTYRAC 1 cut(s) 2286
HindIII AAGCTT 1 cut(s) 1535
HinfI GANTC 8 cut(s) 132, 358, 1300, 1676, 1726, 2135, 2965, 2973
HpaII CCGG 1 cut(s) 129
HphI GGTGA 2 cut(s) 1994, 2078
Hpy166II GTNNAC 4 cut(s) 2150, 2286, 2972, 3078
Hpy188I TCNGA 8 cut(s) 733, 928, 1339, 2134, 2357, 2467, 2562, 2776
Hpy8I GTNNAC 4 cut(s) 2150, 2286, 2972, 3078
Hpy99I CGWCG 2 cut(s) 1343, 3076
HpyAV CCTTC 5 cut(s) 734, 2557, 2643, 2734, 2954
HpyCH4III ACNGT 5 cut(s) 124, 192, 1845, 2290, 2594
HpyCH4IV ACGT 4 cut(s) 234, 1972, 2906, 2990
HpyF10VI GCNNNNNNNGC 3 cut(s) 109, 2733, 3027
HpyF3I CTNAG 9 cut(s) 156, 291, 421, 561, 767, 842, 1477, 1799, 2723
HpySE526I ACGT 4 cut(s) 234, 1972, 2906, 2990
HspAI GCGC 4 cut(s) 1111, 1316, 2217, 2579
KflI GGGWCCC 1 cut(s) 2076
Ksp22I TGATCA 2 cut(s) 1917, 3162
LmnI GCTCC 3 cut(s) 1227, 2735, 2768
Lsp1109I GCAGC 3 cut(s) 66, 2231, 2714
MaeI CTAG 3 cut(s) 324, 1862, 1899
MaeII ACGT 4 cut(s) 234, 1972, 2906, 2990
MaeIII GTNAC 4 cut(s) 281, 466, 2850, 2907
MbiI CCGCTC 1 cut(s) 1962
MfeI CAATTG 3 cut(s) 528, 1692, 2032
MflI RGATCY 4 cut(s) 547, 1281, 1864, 2508
MhlI GDGCHC 3 cut(s) 105, 1224, 2939
MlyI GAGTC 4 cut(s) 367, 1735, 2144, 2967
MmeI TCCRAC 9 cut(s) 525, 559, 568, 681, 1362, 1819, 2418, 2427, 2676
Mph1103I ATGCAT 1 cut(s) 694
MroXI GAANNNNTTC 3 cut(s) 12, 1536, 2964
MslI CAYNNNNRTG 1 cut(s) 2592
MspA1I CMGCKG 3 cut(s) 2222, 2727, 2736
MspCI CTTAAG 4 cut(s) 949, 1924, 2081, 2414
MspI CCGG 1 cut(s) 129
MunI CAATTG 3 cut(s) 528, 1692, 2032
Mva1269I GAATGC 1 cut(s) 1971
MwoI GCNNNNNNNGC 3 cut(s) 109, 2733, 3027
NlaIV GGNNCC 4 cut(s) 549, 1755, 2077, 2078
NmuCI GTSAC 4 cut(s) 281, 466, 2850, 2907
NsbI TGCGCA 1 cut(s) 1112
NsiI ATGCAT 1 cut(s) 694
NspI RCATGY 3 cut(s) 681, 1611, 2126
PaeI GCATGC 1 cut(s) 1611
PagI TCATGA 2 cut(s) 1458, 1528
PciI ACATGT 1 cut(s) 677
PcsI WCGNNNNNNNCGW 1 cut(s) 77
PctI GAATGC 1 cut(s) 1971
PdmI GAANNNNTTC 3 cut(s) 12, 1536, 2964
PfeI GAWTC 4 cut(s) 132, 1300, 1676, 2965
PflFI GACNNNGTC 1 cut(s) 2102
PkrI GCNGC 3 cut(s) 56, 2221, 2729
PleI GAGTC 4 cut(s) 366, 1734, 2143, 2967
PmaCI CACGTG 1 cut(s) 1973
PmlI CACGTG 1 cut(s) 1973
PpsI GAGTC 4 cut(s) 366, 1734, 2143, 2967
Ppu21I YACGTR 1 cut(s) 1973
PpuMI RGGWCCY 1 cut(s) 2076
PscI ACATGT 1 cut(s) 677
PshBI ATTAAT 1 cut(s) 1566
PsiI TTATAA 2 cut(s) 1278, 2240
Psp124BI GAGCTC 1 cut(s) 105
Psp5II RGGWCCY 1 cut(s) 2076
PspCI CACGTG 1 cut(s) 1973
PspFI CCCAGC 1 cut(s) 2071
PspN4I GGNNCC 4 cut(s) 549, 1755, 2077, 2078
PspPI GGNCC 1 cut(s) 2076
PspPPI RGGWCCY 1 cut(s) 2076
PstI CTGCAG 1 cut(s) 2916
PsuI RGATCY 4 cut(s) 547, 1281, 1864, 2508
PsyI GACNNNGTC 1 cut(s) 2102
PvuII CAGCTG 3 cut(s) 2222, 2727, 2736
RsaI GTAC 9 cut(s) 483, 794, 854, 1290, 2002, 2149, 2192, 2297, 2453
RsaNI GTAC 9 cut(s) 482, 793, 853, 1289, 2001, 2148, 2191, 2296, 2452
RseI CAYNNNNRTG 1 cut(s) 2592
SacI GAGCTC 1 cut(s) 105
SatI GCNGC 3 cut(s) 55, 2220, 2728
Sau96I GGNCC 1 cut(s) 2076
ScaI AGTACT 1 cut(s) 854
SchI GAGTC 4 cut(s) 367, 1735, 2144, 2967
SduI GDGCHC 3 cut(s) 105, 1224, 2939
SfcI CTRYAG 1 cut(s) 2912
SinI GGWCC 1 cut(s) 2076
SmiMI CAYNNNNRTG 1 cut(s) 2592
SmlI CTYRAG 6 cut(s) 113, 949, 1886, 1924, 2081, 2414
SmoI CTYRAG 6 cut(s) 113, 949, 1886, 1924, 2081, 2414
SphI GCATGC 1 cut(s) 1611
SsiI CCGC 4 cut(s) 870, 1717, 1962, 2049
SspI AATATT 3 cut(s) 496, 1376, 2344
SspMI CTAG 3 cut(s) 324, 1862, 1899
SstI GAGCTC 1 cut(s) 105
StyI CCWWGG 2 cut(s) 2394, 2526
TaaI ACNGT 5 cut(s) 124, 192, 1845, 2290, 2594
TaiI ACGT 4 cut(s) 237, 1975, 2909, 2993
TaqI TCGA 4 cut(s) 80, 198, 829, 1847
TatI WGTACW 5 cut(s) 852, 1288, 2000, 2190, 2451
TfiI GAWTC 4 cut(s) 132, 1300, 1676, 2965
TscAI CASTG 6 cut(s) 2295, 2599, 2886, 2916, 2939, 2958
TseFI GTSAC 4 cut(s) 281, 466, 2850, 2907
TseI GCWGC 3 cut(s) 54, 2219, 2727
Tsp45I GTSAC 4 cut(s) 281, 466, 2850, 2907
TspGWI ACGGA 3 cut(s) 49, 2630, 2846
TspRI CASTG 6 cut(s) 2295, 2599, 2886, 2916, 2939, 2958
Tth111I GACNNNGTC 1 cut(s) 2102
Vha464I CTTAAG 4 cut(s) 949, 1924, 2081, 2414
VpaK11BI GGWCC 1 cut(s) 2076
VspI ATTAAT 1 cut(s) 1566
XapI RAATTY 8 cut(s) 1024, 1188, 1385, 1522, 1702, 1821, 1849, 2113
XceI RCATGY 3 cut(s) 681, 1611, 2126
XmnI GAANNNNTTC 3 cut(s) 12, 1536, 2964
XspI CTAG 3 cut(s) 324, 1862, 1899
ZrmI AGTACT 1 cut(s) 854
Zsp2I ATGCAT 1 cut(s) 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.