Belongs to the disease resistance NB-LRR family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 141, 1325 |
| AciI | CCGC | 2 cut(s) | 1134, 1475 |
| AclWI | GGATC | 3 cut(s) | 707, 1491, 1595 |
| AcsI | RAATTY | 6 cut(s) | 163, 280, 667, 847, 994, 1519 |
| AcvI | CACGTG | 1 cut(s) | 1058 |
| AfaI | GTAC | 5 cut(s) | 429, 802, 1087, 1234, 1538 |
| AflII | CTTAAG | 2 cut(s) | 1499, 1640 |
| AjnI | CCWGG | 1 cut(s) | 1605 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 654, 686, 1212, 1244 |
| AluBI | AGCT | 3 cut(s) | 74, 682, 1156 |
| AluI | AGCT | 3 cut(s) | 74, 682, 1156 |
| Alw21I | GWGCWC | 1 cut(s) | 363 |
| Alw26I | GTCTC | 2 cut(s) | 958, 1604 |
| AlwI | GGATC | 3 cut(s) | 707, 1491, 1595 |
| Ama87I | CYCGRG | 1 cut(s) | 1287 |
| AoxI | GGCC | 1 cut(s) | 1656 |
| ApaI | GGGCCC | 1 cut(s) | 1660 |
| ApeKI | GCWGC | 1 cut(s) | 71 |
| ApoI | RAATTY | 6 cut(s) | 163, 280, 667, 847, 994, 1519 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 839, 871 |
| AseI | ATTAAT | 1 cut(s) | 1445 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 681 |
| AspLEI | GCGC | 2 cut(s) | 457, 1304 |
| AspS9I | GGNCC | 3 cut(s) | 1161, 1656, 1657 |
| AsuHPI | GGTGA | 2 cut(s) | 244, 1079 |
| AsuII | TTCGAA | 1 cut(s) | 992 |
| AvaI | CYCGRG | 1 cut(s) | 1287 |
| AvaII | GGWCC | 1 cut(s) | 1161 |
| BaeGI | GKGCMC | 1 cut(s) | 1660 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1184, 1217 |
| BanII | GRGCYC | 1 cut(s) | 1660 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1520, 1552 |
| BbrPI | CACGTG | 1 cut(s) | 1058 |
| BbsI | GAAGAC | 1 cut(s) | 1463 |
| Bbv12I | GWGCWC | 1 cut(s) | 363 |
| BbvI | GCAGC | 1 cut(s) | 83 |
| BccI | CCATC | 4 cut(s) | 140, 373, 800, 1641 |
| BciT130I | CCWGG | 1 cut(s) | 1607 |
| BciVI | GTATCC | 1 cut(s) | 1275 |
| BcoDI | GTCTC | 2 cut(s) | 958, 1604 |
| BfaI | CTAG | 1 cut(s) | 1007 |
| BfrI | CTTAAG | 2 cut(s) | 1499, 1640 |
| BfuI | GTATCC | 1 cut(s) | 1275 |
| BglII | AGATCT | 3 cut(s) | 420, 1009, 1027 |
| BisI | GCNGC | 1 cut(s) | 72 |
| BlpI | GCTNAGC | 1 cut(s) | 1152 |
| BlsI | GCNGC | 1 cut(s) | 73 |
| Bme1390I | CCNGG | 1 cut(s) | 1607 |
| Bme18I | GGWCC | 1 cut(s) | 1161 |
| BmeT110I | CYCGRG | 1 cut(s) | 1287 |
| BmgT120I | GGNCC | 3 cut(s) | 1161, 1656, 1657 |
| BmiI | GGNNCC | 4 cut(s) | 156, 1162, 1163, 1658 |
| BmrFI | CCNGG | 1 cut(s) | 1607 |
| BmsI | GCATC | 3 cut(s) | 58, 1264, 1451 |
| BpiI | GAAGAC | 1 cut(s) | 1463 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 204, 236 |
| BpmI | CTGGAG | 1 cut(s) | 1628 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1152 |
| Bpu14I | TTCGAA | 1 cut(s) | 992 |
| BpuEI | CTTGAG | 1 cut(s) | 1226 |
| BsaAI | YACGTR | 1 cut(s) | 1058 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1586 |
| BsaJI | CCNNGG | 2 cut(s) | 1479, 1605 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 515, 545, 1120, 1150, 1242, 1272 |
| Bse1I | ACTGG | 1 cut(s) | 1744 |
| Bse3DI | GCAATG | 1 cut(s) | 1758 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1586 |
| BseBI | CCWGG | 1 cut(s) | 1607 |
| BseDI | CCNNGG | 2 cut(s) | 1479, 1605 |
| BseGI | GGATG | 3 cut(s) | 505, 870, 1652 |
| BseJI | GATNNNNATC | 1 cut(s) | 1586 |
| BseMI | GCAATG | 1 cut(s) | 1758 |
| BseMII | CTCAG | 1 cut(s) | 1143 |
| BseNI | ACTGG | 1 cut(s) | 1744 |
| BseRI | GAGGAG | 2 cut(s) | 203, 1328 |
| BseSI | GKGCMC | 1 cut(s) | 1660 |
| BseXI | GCAGC | 1 cut(s) | 83 |
| BseYI | CCCAGC | 1 cut(s) | 1156 |
| BshFI | GGCC | 1 cut(s) | 1658 |
| BsiHKAI | GWGCWC | 1 cut(s) | 363 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1287 |
| BslFI | GGGAC | 2 cut(s) | 1174, 1194 |
| BsmAI | GTCTC | 2 cut(s) | 958, 1604 |
| BsmFI | GGGAC | 2 cut(s) | 1174, 1194 |
| BsmI | GAATGC | 1 cut(s) | 1056 |
| BsnI | GGCC | 1 cut(s) | 1658 |
| BsoBI | CYCGRG | 1 cut(s) | 1287 |
| Bsp119I | TTCGAA | 1 cut(s) | 992 |
| Bsp120I | GGGCCC | 1 cut(s) | 1656 |
| Bsp1286I | GDGCHC | 2 cut(s) | 363, 1660 |
| Bsp1407I | TGTACA | 1 cut(s) | 427 |
| Bsp143I | GATC | 9 cut(s) | 420, 536, 598, 712, 940, 1009, 1027, 1483, 1587 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1152 |
| BspACI | CCGC | 2 cut(s) | 1134, 1475 |
| BspANI | GGCC | 1 cut(s) | 1658 |
| BspCNI | CTCAG | 1 cut(s) | 1144 |
| BspHI | TCATGA | 2 cut(s) | 603, 673 |
| BspLI | GGNNCC | 4 cut(s) | 156, 1162, 1163, 1658 |
| BspPI | GGATC | 3 cut(s) | 707, 1491, 1595 |
| BspQI | GCTCTTC | 1 cut(s) | 99 |
| BspT104I | TTCGAA | 1 cut(s) | 992 |
| BspTI | CTTAAG | 2 cut(s) | 1499, 1640 |
| BsrDI | GCAATG | 1 cut(s) | 1758 |
| BsrGI | TGTACA | 1 cut(s) | 427 |
| BsrI | ACTGG | 1 cut(s) | 1744 |
| BssECI | CCNNGG | 2 cut(s) | 1479, 1605 |
| BssMI | GATC | 9 cut(s) | 420, 536, 598, 712, 940, 1009, 1027, 1483, 1587 |
| BssT1I | CCWWGG | 1 cut(s) | 1479 |
| Bst2UI | CCWGG | 1 cut(s) | 1607 |
| Bst4CI | ACNGT | 2 cut(s) | 52, 1673 |
| Bst6I | CTCTTC | 1 cut(s) | 99 |
| BstAFI | CTTAAG | 2 cut(s) | 1499, 1640 |
| BstAUI | TGTACA | 1 cut(s) | 427 |
| BstBAI | YACGTR | 1 cut(s) | 1058 |
| BstBI | TTCGAA | 1 cut(s) | 992 |
| BstDEI | CTNAG | 5 cut(s) | 622, 911, 944, 1152, 1186 |
| BstF5I | GGATG | 3 cut(s) | 505, 870, 1652 |
| BstHHI | GCGC | 2 cut(s) | 457, 1304 |
| BstKTI | GATC | 9 cut(s) | 423, 539, 601, 715, 943, 1012, 1030, 1486, 1590 |
| BstMAI | GTCTC | 2 cut(s) | 958, 1604 |
| BstMBI | GATC | 9 cut(s) | 420, 536, 598, 712, 940, 1009, 1027, 1483, 1587 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1148 |
| BstNI | CCWGG | 1 cut(s) | 1607 |
| BstNSI | RCATGY | 1 cut(s) | 1211 |
| BstSCI | CCNGG | 1 cut(s) | 1605 |
| BstSLI | GKGCMC | 1 cut(s) | 1660 |
| BstV1I | GCAGC | 1 cut(s) | 83 |
| BstV2I | GAAGAC | 1 cut(s) | 1463 |
| BstX2I | RGATCY | 4 cut(s) | 420, 1009, 1027, 1587 |
| BstYI | RGATCY | 4 cut(s) | 420, 1009, 1027, 1587 |
| BsuI | GTATCC | 1 cut(s) | 1275 |
| BsuRI | GGCC | 1 cut(s) | 1658 |
| BtsCI | GGATG | 3 cut(s) | 505, 870, 1652 |
| BtsI | GCAGTG | 1 cut(s) | 296 |
| BtsIMutI | CAGTG | 3 cut(s) | 296, 1678, 1737 |
| CciI | TCATGA | 2 cut(s) | 603, 673 |
| CfoI | GCGC | 2 cut(s) | 457, 1304 |
| Cfr13I | GGNCC | 3 cut(s) | 1161, 1656, 1657 |
| CseI | GACGC | 2 cut(s) | 631, 1191 |
| Csp6I | GTAC | 5 cut(s) | 428, 801, 1086, 1233, 1537 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1259, 1294 |
| CviAII | CATG | 6 cut(s) | 604, 674, 689, 1208, 1618, 1760 |
| CviJI | RGCY | 6 cut(s) | 74, 137, 157, 682, 1156, 1658 |
| CviKI_1 | RGCY | 6 cut(s) | 74, 137, 157, 682, 1156, 1658 |
| CviQI | GTAC | 5 cut(s) | 428, 801, 1086, 1233, 1537 |
| DdeI | CTNAG | 5 cut(s) | 622, 911, 944, 1152, 1186 |
| DpnI | GATC | 9 cut(s) | 422, 538, 600, 714, 942, 1011, 1029, 1485, 1589 |
| DpnII | GATC | 9 cut(s) | 420, 536, 598, 712, 940, 1009, 1027, 1483, 1587 |
| DraI | TTTAAA | 1 cut(s) | 1732 |
| Eam1104I | CTCTTC | 1 cut(s) | 99 |
| EarI | CTCTTC | 1 cut(s) | 99 |
| EciI | GGCGGA | 1 cut(s) | 1464 |
| Eco130I | CCWWGG | 1 cut(s) | 1479 |
| Eco24I | GRGCYC | 1 cut(s) | 1660 |
| Eco32I | GATATC | 1 cut(s) | 935 |
| Eco47I | GGWCC | 1 cut(s) | 1161 |
| Eco72I | CACGTG | 1 cut(s) | 1058 |
| Eco88I | CYCGRG | 1 cut(s) | 1287 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1161, 1656 |
| EcoRI | GAATTC | 1 cut(s) | 163 |
| EcoRII | CCWGG | 1 cut(s) | 1605 |
| EcoRV | GATATC | 1 cut(s) | 935 |
| EcoT14I | CCWWGG | 1 cut(s) | 1479 |
| EcoT38I | GRGCYC | 1 cut(s) | 1660 |
| ErhI | CCWWGG | 1 cut(s) | 1479 |
| FaeI | CATG | 6 cut(s) | 607, 677, 692, 1211, 1621, 1763 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 103, 135 |
| FaqI | GGGAC | 2 cut(s) | 1174, 1194 |
| FatI | CATG | 6 cut(s) | 603, 673, 688, 1207, 1617, 1759 |
| FauNDI | CATATG | 1 cut(s) | 508 |
| Fnu4HI | GCNGC | 1 cut(s) | 72 |
| FokI | GGATG | 3 cut(s) | 512, 877, 1659 |
| FriOI | GRGCYC | 1 cut(s) | 1660 |
| Fsp4HI | GCNGC | 1 cut(s) | 72 |
| FspBI | CTAG | 1 cut(s) | 1007 |
| GlaI | GCGC | 2 cut(s) | 456, 1303 |
| GluI | GCNGC | 1 cut(s) | 72 |
| GsaI | CCCAGC | 1 cut(s) | 1160 |
| GsuI | CTGGAG | 1 cut(s) | 1628 |
| HaeIII | GGCC | 1 cut(s) | 1658 |
| HgaI | GACGC | 2 cut(s) | 631, 1191 |
| HhaI | GCGC | 2 cut(s) | 457, 1304 |
| Hin1II | CATG | 6 cut(s) | 607, 677, 692, 1211, 1621, 1763 |
| Hin6I | GCGC | 2 cut(s) | 455, 1302 |
| HinP1I | GCGC | 2 cut(s) | 455, 1302 |
| HindIII | AAGCTT | 1 cut(s) | 680 |
| HinfI | GANTC | 5 cut(s) | 821, 871, 1220, 1712, 1720 |
| HphI | GGTGA | 2 cut(s) | 244, 1079 |
| Hpy166II | GTNNAC | 3 cut(s) | 252, 1235, 1719 |
| Hpy188I | TCNGA | 6 cut(s) | 67, 478, 721, 1014, 1219, 1546 |
| Hpy188III | TCNNGA | 8 cut(s) | 314, 548, 604, 674, 938, 971, 1289, 1439 |
| Hpy8I | GTNNAC | 3 cut(s) | 252, 1235, 1719 |
| Hpy99I | CGWCG | 2 cut(s) | 647, 721 |
| HpyAV | CCTTC | 2 cut(s) | 8, 1503 |
| HpyCH4III | ACNGT | 2 cut(s) | 52, 1673 |
| HpyCH4IV | ACGT | 2 cut(s) | 1057, 1468 |
| HpyCH4V | TGCA | 7 cut(s) | 71, 197, 506, 595, 617, 1270, 1345 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1148 |
| HpyF3I | CTNAG | 5 cut(s) | 622, 911, 944, 1152, 1186 |
| HpySE526I | ACGT | 2 cut(s) | 1057, 1468 |
| Hsp92II | CATG | 6 cut(s) | 607, 677, 692, 1211, 1621, 1763 |
| HspAI | GCGC | 2 cut(s) | 455, 1302 |
| KflI | GGGWCCC | 1 cut(s) | 1161 |
| Kzo9I | GATC | 9 cut(s) | 420, 536, 598, 712, 940, 1009, 1027, 1483, 1587 |
| LguI | GCTCTTC | 1 cut(s) | 99 |
| LmnI | GCTCC | 2 cut(s) | 154, 366 |
| Lsp1109I | GCAGC | 1 cut(s) | 83 |
| LweI | GCATC | 3 cut(s) | 58, 1264, 1451 |
| MaeI | CTAG | 1 cut(s) | 1007 |
| MaeII | ACGT | 2 cut(s) | 1057, 1468 |
| MaeIII | GTNAC | 1 cut(s) | 1620 |
| MalI | GATC | 9 cut(s) | 422, 538, 600, 714, 942, 1011, 1029, 1485, 1589 |
| MboI | GATC | 9 cut(s) | 420, 536, 598, 712, 940, 1009, 1027, 1483, 1587 |
| MfeI | CAATTG | 4 cut(s) | 837, 1117, 1271, 1627 |
| MflI | RGATCY | 4 cut(s) | 420, 1009, 1027, 1587 |
| MhlI | GDGCHC | 2 cut(s) | 363, 1660 |
| MlyI | GAGTC | 2 cut(s) | 880, 1714 |
| MmeI | TCCRAC | 5 cut(s) | 616, 699, 964, 1512, 1689 |
| MroXI | GAANNNNTTC | 1 cut(s) | 681 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1671 |
| MspCI | CTTAAG | 2 cut(s) | 1499, 1640 |
| MspR9I | CCNGG | 1 cut(s) | 1607 |
| MunI | CAATTG | 4 cut(s) | 837, 1117, 1271, 1627 |
| Mva1269I | GAATGC | 1 cut(s) | 1056 |
| MvaI | CCWGG | 1 cut(s) | 1607 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1148 |
| NdeI | CATATG | 1 cut(s) | 508 |
| NdeII | GATC | 9 cut(s) | 420, 536, 598, 712, 940, 1009, 1027, 1483, 1587 |
| NlaIII | CATG | 6 cut(s) | 607, 677, 692, 1211, 1621, 1763 |
| NlaIV | GGNNCC | 4 cut(s) | 156, 1162, 1163, 1658 |
| NspI | RCATGY | 1 cut(s) | 1211 |
| NspV | TTCGAA | 1 cut(s) | 992 |
| PaeR7I | CTCGAG | 1 cut(s) | 1287 |
| PagI | TCATGA | 2 cut(s) | 603, 673 |
| PciSI | GCTCTTC | 1 cut(s) | 99 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1712 |
| PctI | GAATGC | 1 cut(s) | 1056 |
| PdmI | GAANNNNTTC | 1 cut(s) | 681 |
| PfeI | GAWTC | 3 cut(s) | 821, 1220, 1712 |
| PkrI | GCNGC | 1 cut(s) | 73 |
| PleI | GAGTC | 2 cut(s) | 879, 1714 |
| PmaCI | CACGTG | 1 cut(s) | 1058 |
| PmlI | CACGTG | 1 cut(s) | 1058 |
| PpsI | GAGTC | 2 cut(s) | 879, 1714 |
| Ppu21I | YACGTR | 1 cut(s) | 1058 |
| PpuMI | RGGWCCY | 1 cut(s) | 1161 |
| PshBI | ATTAAT | 1 cut(s) | 1445 |
| PsiI | TTATAA | 2 cut(s) | 141, 1325 |
| Psp5II | RGGWCCY | 1 cut(s) | 1161 |
| Psp6I | CCWGG | 1 cut(s) | 1605 |
| PspCI | CACGTG | 1 cut(s) | 1058 |
| PspFI | CCCAGC | 1 cut(s) | 1156 |
| PspGI | CCWGG | 1 cut(s) | 1605 |
| PspN4I | GGNNCC | 4 cut(s) | 156, 1162, 1163, 1658 |
| PspOMI | GGGCCC | 1 cut(s) | 1656 |
| PspPI | GGNCC | 3 cut(s) | 1161, 1656, 1657 |
| PspPPI | RGGWCCY | 1 cut(s) | 1161 |
| PsuI | RGATCY | 4 cut(s) | 420, 1009, 1027, 1587 |
| RsaI | GTAC | 5 cut(s) | 429, 802, 1087, 1234, 1538 |
| RsaNI | GTAC | 5 cut(s) | 428, 801, 1086, 1233, 1537 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1671 |
| SapI | GCTCTTC | 1 cut(s) | 99 |
| SatI | GCNGC | 1 cut(s) | 72 |
| Sau3AI | GATC | 9 cut(s) | 420, 536, 598, 712, 940, 1009, 1027, 1483, 1587 |
| Sau96I | GGNCC | 3 cut(s) | 1161, 1656, 1657 |
| SchI | GAGTC | 2 cut(s) | 880, 1714 |
| ScrFI | CCNGG | 1 cut(s) | 1607 |
| SduI | GDGCHC | 2 cut(s) | 363, 1660 |
| SfaNI | GCATC | 3 cut(s) | 58, 1264, 1451 |
| Sfr274I | CTCGAG | 1 cut(s) | 1287 |
| SfuI | TTCGAA | 1 cut(s) | 992 |
| SinI | GGWCC | 1 cut(s) | 1161 |
| SlaI | CTCGAG | 1 cut(s) | 1287 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1671 |
| SmlI | CTYRAG | 4 cut(s) | 1241, 1287, 1499, 1640 |
| SmoI | CTYRAG | 4 cut(s) | 1241, 1287, 1499, 1640 |
| SsiI | CCGC | 2 cut(s) | 1134, 1475 |
| SspI | AATATT | 2 cut(s) | 515, 1429 |
| SspMI | CTAG | 1 cut(s) | 1007 |
| StyD4I | CCNGG | 1 cut(s) | 1605 |
| StyI | CCWWGG | 1 cut(s) | 1479 |
| TaaI | ACNGT | 2 cut(s) | 52, 1673 |
| TaiI | ACGT | 2 cut(s) | 1060, 1471 |
| TaqI | TCGA | 3 cut(s) | 992, 1288, 1440 |
| TatI | WGTACW | 2 cut(s) | 427, 1536 |
| TfiI | GAWTC | 3 cut(s) | 821, 1220, 1712 |
| TscAI | CASTG | 3 cut(s) | 303, 1678, 1744 |
| TseI | GCWGC | 1 cut(s) | 71 |
| TspGWI | ACGGA | 3 cut(s) | 705, 877, 1709 |
| TspRI | CASTG | 3 cut(s) | 303, 1678, 1744 |
| Vha464I | CTTAAG | 2 cut(s) | 1499, 1640 |
| VpaK11BI | GGWCC | 1 cut(s) | 1161 |
| VspI | ATTAAT | 1 cut(s) | 1445 |
| XapI | RAATTY | 6 cut(s) | 163, 280, 667, 847, 994, 1519 |
| XceI | RCATGY | 1 cut(s) | 1211 |
| XhoI | CTCGAG | 1 cut(s) | 1287 |
| XmnI | GAANNNNTTC | 1 cut(s) | 681 |
| XspI | CTAG | 1 cut(s) | 1007 |