Prupe.1G210700_v2.0.a1

UPF0481 protein At3g47200-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
22426015 .. 22427806
1792 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G210700.1

Sequence Viewer

Length: 1410 bp
ATGGCAGACATGAAATGGGTTATTCAAGTTAATGAAGAGCTCAGTAAGATGGAAGGTCTTACAACAGAGAAGGAACACTGGAGCAAGGGGTCAATCTACAAATTACCAGTCAGCATCACAGACATAAACAAGAAGGCCTACAAGCCCCAGGTAGCCACCTTCGGTCCTTACCATTTCGATCATTTAAATACAACGGAGGTGCACAAGCACCGTGCGCTTCTTCATTTCCTGAAGAGATGTGGGAAACCTTTTGAATTGTTTGTCAATGCACTGACTGAAGTGGTGCAAGATTTGAAGGACTCGTATGATCAGCTTGATCCTGGGTGGAAAGATGATACAGCAAGATTCTTGCAACTAATGATTCTGGATGGCTGTTTCATGCTGGAGGTCGTGCGTATTGCTTCAAATATATTGGATGATTATGCTCTTAATGATCCCGTCTTCAGCAATCATGGGAAGCTCCATATCATACCATACATCAAACGCGACATGTTAATGATTGAGAACCAGTTGCCGATGCTGGTTCTCAACAAGCTGGTGGAAGTGGAGAGCAATAAGGATGAATTGTCCGTGACCAGGCTCTTGCTCAAGTTCTACTACTCTGGCACATCAGCCTCCAACATGGGAAAATGTTTGCACGTATTGGATGTGTACAGGAAAAGCCTGCTTCAGTCAGAGCCCCAGTGCAAAACAGGTCGCTGCCCACCAGCGCCCGTGAATCGTCACGATGTGATTATCTGGTCTGCAACAGAGCTTAATGAAGCCGGAATAAGATTCAAGAAAAGCAAAACTGGTAGCCTGAAAGACATCTCATTCTCTGGGGGAATCCTCAGGCTCCCAGTCATTATTGTGGATGATACCACCGAGTCGATGTTCTTGAATCTGATAGCATTTGAGCGCTTCCATGTTGGGGCAGGCAATGAGGTGACATCCTATATATTCTTCATGGACAACATCATAGACAATGCTAGAGATGTTGCCCTCTTACACTCCAAAGGTATCGTCCAAAATGCTCTGGGAAGTGACAAAGCGGTTGCTAATCTGTTCAACTCACTCTCCAAGGACATAACACTGGACCCAGAAAGCAGCCTCGATGCGGTACATAAGAAGGTCTATCATTACTGCCGGAAGCCTTGGAACGAGTGGCGTGCCAATCTTATTCATACTTACTTCAGAAATCCCTGGGCTGTTATATCTCTAATTGCCGGCGTCTTCCTTTTTGTGCTCACCATAGCTCAGACTGGATATTCCATAATTCCCTACTACTATCCAAATGATTCTCCTCCCACCTGTACATGTGTACCTGGGGCTCCGCCCCATGTGGCTTCTTCAAACCATGCATACTCCACCTCACCATCAAAATTCATACTTCCTATTCTTATTTCCGTTGGATGGATGCTTACAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

470

Amino Acids

53.1

Weight (kDa)

7.27

Isoelectric Point (pI)

37.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 486
AciI CCGC 3 cut(s) 1031, 1097, 1313
AclWI GGATC 2 cut(s) 311, 428
AcsI RAATTY 1 cut(s) 1361
AcuI CTGAAG 5 cut(s) 251, 297, 427, 653, 1156
AcyI GRCGYC 1 cut(s) 1209
AdeI CACNNNGTG 1 cut(s) 730
AfaI GTAC 4 cut(s) 653, 1101, 1294, 1302
AfeI AGCGCT 1 cut(s) 899
AfiI CCNNNNNNNGG 4 cut(s) 576, 910, 1096, 1392
AflIII ACRYGT 2 cut(s) 489, 1295
AgsI TTSAA 8 cut(s) 26, 254, 295, 405, 778, 880, 1048, 1332
AjnI CCWGG 5 cut(s) 147, 319, 575, 1181, 1303
AluBI AGCT 6 cut(s) 40, 313, 460, 535, 754, 1235
AluI AGCT 6 cut(s) 40, 313, 460, 535, 754, 1235
Alw21I GWGCWC 3 cut(s) 42, 204, 1227
Alw44I GTGCAC 1 cut(s) 200
AlwI GGATC 2 cut(s) 311, 428
Aor51HI AGCGCT 1 cut(s) 899
AoxI GGCC 1 cut(s) 135
ApaLI GTGCAC 1 cut(s) 200
ApeKI GCWGC 2 cut(s) 699, 1086
ApoI RAATTY 1 cut(s) 1361
ArsI GACNNNNNNTTYG 4 cut(s) 93, 125, 987, 1019
AspLEI GCGC 3 cut(s) 217, 712, 900
AspS9I GGNCC 2 cut(s) 164, 1075
AsuHPI GGTGA 3 cut(s) 937, 1219, 1344
AvaII GGWCC 2 cut(s) 164, 1075
AxyI CCTNAGG 1 cut(s) 830
BaeGI GKGCMC 1 cut(s) 204
BaeI ACNNNNGTAYC 2 cut(s) 1284, 1317
BanII GRGCYC 3 cut(s) 42, 681, 1312
BbsI GAAGAC 2 cut(s) 433, 1204
Bbv12I GWGCWC 3 cut(s) 42, 204, 1227
BbvI GCAGC 2 cut(s) 686, 1098
BccI CCATC 4 cut(s) 43, 362, 1363, 1386
BcgI CGANNNNNNTGC 2 cut(s) 1130, 1164
BciT130I CCWGG 5 cut(s) 149, 321, 577, 1183, 1305
BclI TGATCA 1 cut(s) 307
BfaI CTAG 1 cut(s) 969
BfoI RGCGCY 2 cut(s) 713, 901
BisI GCNGC 2 cut(s) 700, 1087
BlsI GCNGC 2 cut(s) 701, 1088
Bme1390I CCNGG 5 cut(s) 149, 321, 577, 1183, 1305
Bme18I GGWCC 2 cut(s) 164, 1075
BmgT120I GGNCC 2 cut(s) 164, 1075
BmiI GGNNCC 3 cut(s) 836, 1077, 1311
BmrFI CCNGG 5 cut(s) 149, 321, 577, 1183, 1305
BmrI ACTGGG 2 cut(s) 676, 833
BmsI GCATC 4 cut(s) 123, 507, 1084, 1386
BmuI ACTGGG 2 cut(s) 676, 833
BpiI GAAGAC 2 cut(s) 433, 1204
BpmI CTGGAG 2 cut(s) 100, 404
BpuEI CTTGAG 1 cut(s) 572
BsaAI YACGTR 1 cut(s) 640
BsaHI GRCGYC 1 cut(s) 1209
BsaJI CCNNGG 7 cut(s) 147, 320, 1059, 1133, 1181, 1182, 1304
BsaXI ACNNNNNCTCC 2 cut(s) 1040, 1070
Bsc4I CCNNNNNNNGG 4 cut(s) 576, 910, 1096, 1392
Bse118I RCCGGY 1 cut(s) 1205
Bse1I ACTGG 8 cut(s) 83, 107, 508, 682, 796, 839, 1077, 1246
Bse21I CCTNAGG 1 cut(s) 830
Bse3DI GCAATG 1 cut(s) 925
BseBI CCWGG 5 cut(s) 149, 321, 577, 1183, 1305
BseDI CCNNGG 7 cut(s) 147, 320, 1059, 1133, 1181, 1182, 1304
BseGI GGATG 8 cut(s) 373, 421, 565, 652, 859, 929, 1397, 1401
BseLI CCNNNNNNNGG 4 cut(s) 576, 910, 1096, 1392
BseMI GCAATG 1 cut(s) 925
BseMII CTCAG 3 cut(s) 55, 844, 1250
BseNI ACTGG 8 cut(s) 83, 107, 508, 682, 796, 839, 1077, 1246
BseRI GAGGAG 1 cut(s) 1272
BseSI GKGCMC 1 cut(s) 204
BseXI GCAGC 2 cut(s) 686, 1098
Bsh1236I CGCG 1 cut(s) 486
BshFI GGCC 1 cut(s) 137
BsiHKAI GWGCWC 3 cut(s) 42, 204, 1227
BsiSI CCGG 3 cut(s) 765, 1126, 1206
BslI CCNNNNNNNGG 4 cut(s) 576, 910, 1096, 1392
BsnI GGCC 1 cut(s) 137
Bsp1286I GDGCHC 5 cut(s) 42, 204, 681, 1227, 1312
Bsp1407I TGTACA 2 cut(s) 651, 1292
Bsp143I GATC 4 cut(s) 178, 307, 316, 433
BspACI CCGC 3 cut(s) 1031, 1097, 1313
BspANI GGCC 1 cut(s) 137
BspCNI CTCAG 3 cut(s) 54, 843, 1249
BspFNI CGCG 1 cut(s) 486
BspLI GGNNCC 3 cut(s) 836, 1077, 1311
BspPI GGATC 2 cut(s) 311, 428
BspQI GCTCTTC 1 cut(s) 30
BsrDI GCAATG 1 cut(s) 925
BsrFI RCCGGY 1 cut(s) 1205
BsrGI TGTACA 2 cut(s) 651, 1292
BsrI ACTGG 8 cut(s) 83, 107, 508, 682, 796, 839, 1077, 1246
BssAI RCCGGY 1 cut(s) 1205
BssECI CCNNGG 7 cut(s) 147, 320, 1059, 1133, 1181, 1182, 1304
BssMI GATC 4 cut(s) 178, 307, 316, 433
BssNI GRCGYC 1 cut(s) 1209
BssT1I CCWWGG 2 cut(s) 1059, 1133
Bst2UI CCWGG 5 cut(s) 149, 321, 577, 1183, 1305
Bst4CI ACNGT 1 cut(s) 212
Bst6I CTCTTC 2 cut(s) 30, 227
BstACI GRCGYC 1 cut(s) 1209
BstAUI TGTACA 2 cut(s) 651, 1292
BstBAI YACGTR 1 cut(s) 640
BstC8I GCNNGC 4 cut(s) 665, 916, 1149, 1207
BstDEI CTNAG 3 cut(s) 41, 830, 1236
BstF5I GGATG 8 cut(s) 373, 421, 565, 652, 859, 929, 1397, 1401
BstFNI CGCG 1 cut(s) 486
BstH2I RGCGCY 2 cut(s) 713, 901
BstHHI GCGC 3 cut(s) 217, 712, 900
BstKTI GATC 4 cut(s) 181, 310, 319, 436
BstMBI GATC 4 cut(s) 178, 307, 316, 433
BstMWI GCNNNNNNNGC 1 cut(s) 214
BstNI CCWGG 5 cut(s) 149, 321, 577, 1183, 1305
BstNSI RCATGY 2 cut(s) 493, 1299
BstSCI CCNGG 5 cut(s) 147, 319, 575, 1181, 1303
BstSLI GKGCMC 1 cut(s) 204
BstUI CGCG 1 cut(s) 486
BstV1I GCAGC 2 cut(s) 686, 1098
BstV2I GAAGAC 2 cut(s) 433, 1204
Bsu36I CCTNAGG 1 cut(s) 830
BsuRI GGCC 1 cut(s) 137
BtsCI GGATG 8 cut(s) 373, 421, 565, 652, 859, 929, 1397, 1401
BtsIMutI CAGTG 4 cut(s) 76, 269, 689, 1070
Cac8I GCNNGC 4 cut(s) 665, 916, 1149, 1207
CfoI GCGC 3 cut(s) 217, 712, 900
Cfr10I RCCGGY 1 cut(s) 1205
Cfr13I GGNCC 2 cut(s) 164, 1075
CseI GACGC 1 cut(s) 1198
Csp6I GTAC 4 cut(s) 652, 1100, 1293, 1301
CviQI GTAC 4 cut(s) 652, 1100, 1293, 1301
DdeI CTNAG 3 cut(s) 41, 830, 1236
DpnI GATC 4 cut(s) 180, 309, 318, 435
DpnII GATC 4 cut(s) 178, 307, 316, 433
DraI TTTAAA 1 cut(s) 186
DraIII CACNNNGTG 1 cut(s) 730
Eam1104I CTCTTC 2 cut(s) 30, 227
EarI CTCTTC 2 cut(s) 30, 227
EciI GGCGGA 1 cut(s) 1302
Ecl136II GAGCTC 1 cut(s) 40
Eco130I CCWWGG 2 cut(s) 1059, 1133
Eco147I AGGCCT 1 cut(s) 137
Eco24I GRGCYC 3 cut(s) 42, 681, 1312
Eco47I GGWCC 2 cut(s) 164, 1075
Eco47III AGCGCT 1 cut(s) 899
Eco53kI GAGCTC 1 cut(s) 40
Eco57I CTGAAG 5 cut(s) 251, 297, 427, 653, 1156
Eco81I CCTNAGG 1 cut(s) 830
EcoICRI GAGCTC 1 cut(s) 40
EcoRII CCWGG 5 cut(s) 147, 319, 575, 1181, 1303
EcoT14I CCWWGG 2 cut(s) 1059, 1133
EcoT22I ATGCAT 1 cut(s) 1342
EcoT38I GRGCYC 3 cut(s) 42, 681, 1312
ErhI CCWWGG 2 cut(s) 1059, 1133
FbaI TGATCA 1 cut(s) 307
Fnu4HI GCNGC 2 cut(s) 700, 1087
FokI GGATG 7 cut(s) 380, 428, 572, 659, 866, 916, 1404
FriOI GRGCYC 3 cut(s) 42, 681, 1312
Fsp4HI GCNGC 2 cut(s) 700, 1087
FspBI CTAG 1 cut(s) 969
GlaI GCGC 3 cut(s) 216, 711, 899
GluI GCNGC 2 cut(s) 700, 1087
GsuI CTGGAG 2 cut(s) 100, 404
HaeII RGCGCY 2 cut(s) 713, 901
HaeIII GGCC 1 cut(s) 137
HapII CCGG 3 cut(s) 765, 1126, 1206
HgaI GACGC 1 cut(s) 1198
HhaI GCGC 3 cut(s) 217, 712, 900
Hin1I GRCGYC 1 cut(s) 1209
Hin6I GCGC 3 cut(s) 215, 710, 898
HinP1I GCGC 3 cut(s) 215, 710, 898
HinfI GANTC 9 cut(s) 299, 345, 361, 718, 774, 825, 866, 880, 1277
HpaII CCGG 3 cut(s) 765, 1126, 1206
HphI GGTGA 3 cut(s) 937, 1219, 1344
Hpy166II GTNNAC 3 cut(s) 202, 652, 1301
Hpy188I TCNGA 4 cut(s) 676, 885, 1175, 1239
Hpy188III TCNNGA 5 cut(s) 229, 365, 725, 778, 877
Hpy8I GTNNAC 3 cut(s) 202, 652, 1301
HpyAV CCTTC 6 cut(s) 47, 64, 127, 169, 289, 1102
HpyCH4III ACNGT 1 cut(s) 212
HpyCH4IV ACGT 1 cut(s) 639
HpyCH4V TGCA 8 cut(s) 202, 269, 286, 352, 637, 687, 746, 1340
HpyF10VI GCNNNNNNNGC 1 cut(s) 214
HpyF3I CTNAG 3 cut(s) 41, 830, 1236
HpySE526I ACGT 1 cut(s) 639
Hsp92I GRCGYC 1 cut(s) 1209
HspAI GCGC 3 cut(s) 215, 710, 898
KroI GCCGGC 1 cut(s) 1205
KroNI GCCGGC 1 cut(s) 1207
Ksp22I TGATCA 1 cut(s) 307
Kzo9I GATC 4 cut(s) 178, 307, 316, 433
LguI GCTCTTC 1 cut(s) 30
LmnI GCTCC 4 cut(s) 81, 465, 840, 1315
Lsp1109I GCAGC 2 cut(s) 686, 1098
LweI GCATC 4 cut(s) 123, 507, 1084, 1386
MaeI CTAG 1 cut(s) 969
MaeII ACGT 1 cut(s) 639
MaeIII GTNAC 4 cut(s) 571, 722, 925, 1022
MalI GATC 4 cut(s) 180, 309, 318, 435
MboI GATC 4 cut(s) 178, 307, 316, 433
MboII GAAGA 7 cut(s) 47, 212, 244, 433, 934, 1204, 1320
MhlI GDGCHC 5 cut(s) 42, 204, 681, 1227, 1312
MluCI AATT 6 cut(s) 101, 254, 563, 1200, 1254, 1361
MlyI GAGTC 2 cut(s) 293, 875
MmeI TCCRAC 2 cut(s) 642, 1369
MnlI CCTC 9 cut(s) 190, 379, 625, 839, 916, 992, 1100, 1293, 1360
Mph1103I ATGCAT 1 cut(s) 1342
MroNI GCCGGC 1 cut(s) 1205
MseI TTAA 5 cut(s) 30, 185, 429, 494, 756
MslI CAYNNNNRTG 2 cut(s) 494, 848
MspI CCGG 3 cut(s) 765, 1126, 1206
MspR9I CCNGG 5 cut(s) 149, 321, 577, 1183, 1305
MvaI CCWGG 5 cut(s) 149, 321, 577, 1183, 1305
MvnI CGCG 1 cut(s) 486
MwoI GCNNNNNNNGC 1 cut(s) 214
NaeI GCCGGC 1 cut(s) 1207
NdeII GATC 4 cut(s) 178, 307, 316, 433
NgoMIV GCCGGC 1 cut(s) 1205
NlaIV GGNNCC 3 cut(s) 836, 1077, 1311
NmuCI GTSAC 4 cut(s) 571, 722, 925, 1022
NsiI ATGCAT 1 cut(s) 1342
NspI RCATGY 2 cut(s) 493, 1299
PasI CCCWGGG 1 cut(s) 1182
PceI AGGCCT 1 cut(s) 137
PciI ACATGT 2 cut(s) 489, 1295
PciSI GCTCTTC 1 cut(s) 30
PdiI GCCGGC 1 cut(s) 1207
PfeI GAWTC 7 cut(s) 345, 361, 718, 774, 825, 880, 1277
PkrI GCNGC 2 cut(s) 701, 1088
PleI GAGTC 2 cut(s) 293, 874
PpsI GAGTC 2 cut(s) 293, 874
Ppu21I YACGTR 1 cut(s) 640
PscI ACATGT 2 cut(s) 489, 1295
Psp124BI GAGCTC 1 cut(s) 42
Psp6I CCWGG 5 cut(s) 147, 319, 575, 1181, 1303
PspGI CCWGG 5 cut(s) 147, 319, 575, 1181, 1303
PspN4I GGNNCC 3 cut(s) 836, 1077, 1311
PspPI GGNCC 2 cut(s) 164, 1075
RsaI GTAC 4 cut(s) 653, 1101, 1294, 1302
RsaNI GTAC 4 cut(s) 652, 1100, 1293, 1301
RseI CAYNNNNRTG 2 cut(s) 494, 848
SacI GAGCTC 1 cut(s) 42
SapI GCTCTTC 1 cut(s) 30
SaqAI TTAA 5 cut(s) 30, 185, 429, 494, 756
SatI GCNGC 2 cut(s) 700, 1087
Sau3AI GATC 4 cut(s) 178, 307, 316, 433
Sau96I GGNCC 2 cut(s) 164, 1075
SchI GAGTC 2 cut(s) 293, 875
ScrFI CCNGG 5 cut(s) 149, 321, 577, 1183, 1305
SduI GDGCHC 5 cut(s) 42, 204, 681, 1227, 1312
SfaNI GCATC 4 cut(s) 123, 507, 1084, 1386
SinI GGWCC 2 cut(s) 164, 1075
SmiI ATTTAAAT 1 cut(s) 186
SmiMI CAYNNNNRTG 2 cut(s) 494, 848
SmlI CTYRAG 1 cut(s) 587
SmoI CTYRAG 1 cut(s) 587
Sse9I AATT 6 cut(s) 101, 254, 563, 1200, 1254, 1361
SseBI AGGCCT 1 cut(s) 137
SsiI CCGC 3 cut(s) 1031, 1097, 1313
SspMI CTAG 1 cut(s) 969
SstI GAGCTC 1 cut(s) 42
StuI AGGCCT 1 cut(s) 137
StyD4I CCNGG 5 cut(s) 147, 319, 575, 1181, 1303
StyI CCWWGG 2 cut(s) 1059, 1133
SwaI ATTTAAAT 1 cut(s) 186
TaaI ACNGT 1 cut(s) 212
TaiI ACGT 1 cut(s) 642
TaqI TCGA 3 cut(s) 177, 869, 1092
TaqII GACCGA 1 cut(s) 152
TasI AATT 6 cut(s) 101, 254, 563, 1200, 1254, 1361
TatI WGTACW 2 cut(s) 651, 1292
TfiI GAWTC 7 cut(s) 345, 361, 718, 774, 825, 880, 1277
Tru1I TTAA 5 cut(s) 30, 185, 429, 494, 756
Tru9I TTAA 5 cut(s) 30, 185, 429, 494, 756
TscAI CASTG 4 cut(s) 83, 276, 689, 1077
TseFI GTSAC 4 cut(s) 571, 722, 925, 1022
TseI GCWGC 2 cut(s) 699, 1086
Tsp45I GTSAC 4 cut(s) 571, 722, 925, 1022
TspDTI ATGAA 9 cut(s) 26, 48, 212, 367, 576, 774, 934, 1151, 1354
TspGWI ACGGA 3 cut(s) 209, 559, 1375
TspRI CASTG 4 cut(s) 83, 276, 689, 1077
VneI GTGCAC 1 cut(s) 200
VpaK11BI GGWCC 2 cut(s) 164, 1075
XapI RAATTY 1 cut(s) 1361
XceI RCATGY 2 cut(s) 493, 1299
XspI CTAG 1 cut(s) 969
Zsp2I ATGCAT 1 cut(s) 1342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.