Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001611

Physical Location & Seq

Genomic Coordinates Reverse (-)

28503206 .. 28505804

Gene Structure 2599 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G282300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 897 bp

ATTTGCCCGCCAATACCCAGATCGTCTGTGTCTCCATTGCTTCTTATCAGGGACAGTCTTTTTAGTAATATATTCTTAGAGGACGGTCCAAAGCTCAAAAATTTGAATGGGGTTTTGATCAATACGTTTGAAGGGCTAGAAGCAGAGGCATTACATGCGCTTAACGGTGGAAAAGTAACTTTCAATGATGGGTTTGGGTTGCCCCCAGTTTTTCCCGTTGGGCCTTTTGTGCCCTGTGAGTTTGAGAAGCTGCAAGGAGATGATGACCGCGACCAACTGAGAAACTGGCTTGATGATCAACATGATGGGTCAGTGGTTAATGTGAGCTTCGGAAGCAGGACGGCCCTGTCAGGAGACCAAATCAGAGAGGTGGGTGATGGGCTGGTCAAAAGCGGGTTTAGGTTCTTGTGGGTGGTGAAGGAGAAGCTGGTTGAGCCAGAGGAAGAAGAAGAGGGCAATTTAGTAATTGGGCATGACCTTGTGGAGAAACTGAAGGGCAGGGGGTTGGTAGTGAAAAGCTGGGTGGAGCAAGGAGAAATCTTGGGTCACAGAGCAGTGGGTGGTTTTGTGAGCCATTGTGGCTGGAACTCGGTGGTTGAGGCTGCATGGCATGGCGTTAGAGTTCTGGCTTGGCCACAGCAGAGCGATCAAAAGATCAATGCAGAGGTGTGTGGGCTGGGGTTTTGGGCCAAAACTTGGCCTTGGGGCGGCGGCGAGAATGACAAGGTGGTGGTCAACGGTGAAGAGATTGGCGATAAGATCAAAGAACTGATGCAGAGTGAAGCTCTGAGAGTGCAAGCTGCAAGGATTGAGCAAGAGGCTAAGAAGACCGCTGAAGTTGGTGGGTGCCGTGGGAAAATGTTGAAGAGACTCATTGACGAGTGGAGGAAAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0047243 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

299

Amino Acids

32.96

Weight (kDa)

5.24

Isoelectric Point (pI)

36.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001611)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g47620
malus_domestica	MD16G1064500.v1.1 MD16G1276100.v1.1 MD17G1055500.v1.1
prunus_persica	Prupe.1G282300_v2.0.a1 Prupe.3G260200_v2.0.a1
pyrus_communis	pycom16g05630 pycom16g05640 pycom17g05420
rosa_chinensis	RchiOBHm_Chr2g0166721 RchiOBHm_Chr4g0438831 RchiOBHm_Chr4g0438841
rosa_laevigata	RLG00000006326 RLG00000006327 RLG00000021642
rosa_multiflora	Rmu_co8237817.1_g000001 Rmu_sc0000431.1_g000011 Rmu_sc0002181.1_g000012 Rmu_sc0002505.1_g000018 Rmu_sc0002505.1_g000020 Rmu_sc0003748.1_g000012 Rmu_sc0005433.1_g000002 Rmu_sc0007415.1_g000054 Rmu_sc0009639.1_g000019 Rmu_sc0023543.1_g000001 Rmu_sc0041865.1_g000001
rosa_roxburghii	Rroxscaffold_2G00084290 Rroxscaffold_2G00084610 Rroxscaffold_5G00379870
rosa_rugosa	Rorug02G0525100 Rorug04G0313400 Rorug04G0313400
rosa_samantha	Rh1AG297400 Rh2AG591400 Rh2BG000200 Rh2BG603100 Rh2CG574200 Rh2DG614000 Rh4AG192000 Rh4AG364400 Rh4BG375500 Rh4CG389600 Rh4DG370100 Rh4DG370200 Rh5DG208500 Rh7CG204500
rosa_wichuraiana	Rw0G007250 Rw0G016800 Rw2G049270 Rw4G016330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	346
AccB1I	GGYRCC	1 cut(s)	846
AccB7I	CCANNNNNTGG	1 cut(s)	696
AccII	CGCG	1 cut(s)	270
AciI	CCGC	6 cut(s)	8, 268, 393, 708, 711, 831
AcoI	YGGCCR	1 cut(s)	632
AcsI	RAATTY	1 cut(s)	100
AcuI	CTGAAG	2 cut(s)	512, 855
AfiI	CCNNNNNNNGG	2 cut(s)	696, 707
AgsI	TTSAA	4 cut(s)	106, 131, 184, 865
AluBI	AGCT	7 cut(s)	94, 250, 327, 427, 519, 785, 800
AluI	AGCT	7 cut(s)	94, 250, 327, 427, 519, 785, 800
Alw26I	GTCTC	3 cut(s)	36, 348, 862
AoxI	GGCC	5 cut(s)	221, 342, 632, 687, 698
ApeKI	GCWGC	3 cut(s)	250, 602, 800
ApoI	RAATTY	1 cut(s)	100
AspLEI	GCGC	1 cut(s)	160
AspS9I	GGNCC	4 cut(s)	86, 221, 343, 687
AsuHPI	GGTGA	3 cut(s)	386, 427, 752
AvaII	GGWCC	1 cut(s)	86
BaeGI	GKGCMC	1 cut(s)	234
BalI	TGGCCA	1 cut(s)	634
BanI	GGYRCC	1 cut(s)	846
BbsI	GAAGAC	1 cut(s)	833
BbvI	GCAGC	3 cut(s)	237, 589, 787
BccI	CCATC	3 cut(s)	182, 299, 371
BceAI	ACGGC	2 cut(s)	357, 834
BclI	TGATCA	2 cut(s)	117, 295
BcoDI	GTCTC	3 cut(s)	36, 348, 862
BfaI	CTAG	1 cut(s)	137
BglI	GCCNNNNNGGC	1 cut(s)	579
BisI	GCNGC	5 cut(s)	251, 603, 709, 712, 801
BlsI	GCNGC	5 cut(s)	252, 604, 710, 713, 802
Bme18I	GGWCC	1 cut(s)	86
BmgT120I	GGNCC	4 cut(s)	86, 221, 343, 687
BmiI	GGNNCC	1 cut(s)	848
BmrI	ACTGGG	1 cut(s)	200
BmsI	GCATC	1 cut(s)	762
BmuI	ACTGGG	1 cut(s)	200
BpiI	GAAGAC	1 cut(s)	833
BplI	GAGNNNNNCTC	2 cut(s)	769, 801
BsaI	GGTCTC	1 cut(s)	348
BsaJI	CCNNGG	2 cut(s)	701, 850
Bsc4I	CCNNNNNNNGG	2 cut(s)	696, 707
Bse1I	ACTGG	2 cut(s)	206, 290
Bse3DI	GCAATG	1 cut(s)	35
BseDI	CCNNGG	2 cut(s)	701, 850
BseLI	CCNNNNNNNGG	2 cut(s)	696, 707
BseMI	GCAATG	1 cut(s)	35
BseMII	CTCAG	2 cut(s)	269, 779
BseNI	ACTGG	2 cut(s)	206, 290
BseSI	GKGCMC	1 cut(s)	234
BseXI	GCAGC	3 cut(s)	237, 589, 787
BseYI	CCCAGC	2 cut(s)	519, 676
Bsh1236I	CGCG	1 cut(s)	270
BshFI	GGCC	5 cut(s)	223, 344, 634, 689, 700
BshNI	GGYRCC	1 cut(s)	846
BslFI	GGGAC	1 cut(s)	65
BslI	CCNNNNNNNGG	2 cut(s)	696, 707
BsmAI	GTCTC	3 cut(s)	36, 348, 862
BsmFI	GGGAC	1 cut(s)	65
BsnI	GGCC	5 cut(s)	223, 344, 634, 689, 700
Bso31I	GGTCTC	1 cut(s)	348
Bsp1286I	GDGCHC	1 cut(s)	234
Bsp143I	GATC	6 cut(s)	20, 117, 295, 646, 654, 759
BspACI	CCGC	6 cut(s)	8, 268, 393, 708, 711, 831
BspANI	GGCC	5 cut(s)	223, 344, 634, 689, 700
BspCNI	CTCAG	2 cut(s)	270, 780
BspFNI	CGCG	1 cut(s)	270
BspLI	GGNNCC	1 cut(s)	848
BspT107I	GGYRCC	1 cut(s)	846
BspTNI	GGTCTC	1 cut(s)	348
BsrDI	GCAATG	1 cut(s)	35
BsrI	ACTGG	2 cut(s)	206, 290
BssECI	CCNNGG	2 cut(s)	701, 850
BssMI	GATC	6 cut(s)	20, 117, 295, 646, 654, 759
BssT1I	CCWWGG	1 cut(s)	701
Bst4CI	ACNGT	4 cut(s)	56, 86, 167, 740
Bst6I	CTCTTC	3 cut(s)	444, 738, 860
BstAPI	GCANNNNNTGC	1 cut(s)	155
BstC8I	GCNNGC	2 cut(s)	8, 798
BstDEI	CTNAG	4 cut(s)	76, 278, 788, 822
BstDSI	CCRYGG	1 cut(s)	850
BstFNI	CGCG	1 cut(s)	270
BstHHI	GCGC	1 cut(s)	160
BstKTI	GATC	6 cut(s)	23, 120, 298, 649, 657, 762
BstMAI	GTCTC	3 cut(s)	36, 348, 862
BstMBI	GATC	6 cut(s)	20, 117, 295, 646, 654, 759
BstMWI	GCNNNNNNNGC	5 cut(s)	155, 229, 333, 433, 579
BstNSI	RCATGY	1 cut(s)	158
BstSLI	GKGCMC	1 cut(s)	234
BstUI	CGCG	1 cut(s)	270
BstV1I	GCAGC	3 cut(s)	237, 589, 787
BstV2I	GAAGAC	1 cut(s)	833
BsuRI	GGCC	5 cut(s)	223, 344, 634, 689, 700
BtgI	CCRYGG	1 cut(s)	850
BtsI	GCAGTG	1 cut(s)	561
BtsIMutI	CAGTG	2 cut(s)	318, 561
Cac8I	GCNNGC	2 cut(s)	8, 798
CfoI	GCGC	1 cut(s)	160
Cfr13I	GGNCC	4 cut(s)	86, 221, 343, 687
CviAII	CATG	5 cut(s)	155, 302, 473, 606, 611
DdeI	CTNAG	4 cut(s)	76, 278, 788, 822
DpnI	GATC	6 cut(s)	22, 119, 297, 648, 656, 761
DpnII	GATC	6 cut(s)	20, 117, 295, 646, 654, 759
DrdI	GACNNNNNNGTC	1 cut(s)	346
DseDI	GACNNNNNNGTC	1 cut(s)	346
EaeI	YGGCCR	1 cut(s)	632
Eam1104I	CTCTTC	3 cut(s)	444, 738, 860
EarI	CTCTTC	3 cut(s)	444, 738, 860
Eco130I	CCWWGG	1 cut(s)	701
Eco31I	GGTCTC	1 cut(s)	348
Eco47I	GGWCC	1 cut(s)	86
Eco57I	CTGAAG	2 cut(s)	512, 855
EcoT14I	CCWWGG	1 cut(s)	701
ErhI	CCWWGG	1 cut(s)	701
FaeI	CATG	5 cut(s)	158, 305, 476, 609, 614
FaiI	YATR	6 cut(s)	71, 156, 303, 474, 607, 612
FaqI	GGGAC	1 cut(s)	65
FatI	CATG	5 cut(s)	154, 301, 472, 605, 610
FauI	CCCGC	2 cut(s)	15, 386
FbaI	TGATCA	2 cut(s)	117, 295
Fnu4HI	GCNGC	5 cut(s)	251, 603, 709, 712, 801
Fsp4HI	GCNGC	5 cut(s)	251, 603, 709, 712, 801
FspBI	CTAG	1 cut(s)	137
GlaI	GCGC	1 cut(s)	159
GluI	GCNGC	5 cut(s)	251, 603, 709, 712, 801
GsaI	CCCAGC	2 cut(s)	523, 680
HaeIII	GGCC	5 cut(s)	223, 344, 634, 689, 700
HhaI	GCGC	1 cut(s)	160
Hin1II	CATG	5 cut(s)	158, 305, 476, 609, 614
Hin6I	GCGC	1 cut(s)	158
HinP1I	GCGC	1 cut(s)	158
HincII	GTYRAC	1 cut(s)	736
HindII	GTYRAC	1 cut(s)	736
HinfI	GANTC	1 cut(s)	870
HphI	GGTGA	3 cut(s)	386, 427, 752
Hpy166II	GTNNAC	1 cut(s)	736
Hpy188I	TCNGA	3 cut(s)	332, 365, 789
Hpy188III	TCNNGA	1 cut(s)	351
Hpy8I	GTNNAC	1 cut(s)	736
HpyAV	CCTTC	3 cut(s)	125, 412, 487
HpyCH4III	ACNGT	4 cut(s)	56, 86, 167, 740
HpyCH4IV	ACGT	1 cut(s)	125
HpyCH4V	TGCA	6 cut(s)	253, 605, 662, 775, 796, 803
HpyF10VI	GCNNNNNNNGC	5 cut(s)	155, 229, 333, 433, 579
HpyF3I	CTNAG	4 cut(s)	76, 278, 788, 822
HpySE526I	ACGT	1 cut(s)	125
Hsp92II	CATG	5 cut(s)	158, 305, 476, 609, 614
HspAI	GCGC	1 cut(s)	158
Ksp22I	TGATCA	2 cut(s)	117, 295
Kzo9I	GATC	6 cut(s)	20, 117, 295, 646, 654, 759
LmnI	GCTCC	1 cut(s)	526
Lsp1109I	GCAGC	3 cut(s)	237, 589, 787
LweI	GCATC	1 cut(s)	762
MaeI	CTAG	1 cut(s)	137
MaeII	ACGT	1 cut(s)	125
MaeIII	GTNAC	2 cut(s)	175, 545
MalI	GATC	6 cut(s)	22, 119, 297, 648, 656, 761
MboI	GATC	6 cut(s)	20, 117, 295, 646, 654, 759
MboII	GAAGA	6 cut(s)	455, 458, 461, 755, 838, 877
MhlI	GDGCHC	1 cut(s)	234
MlsI	TGGCCA	1 cut(s)	634
MluCI	AATT	3 cut(s)	100, 457, 465
MluNI	TGGCCA	1 cut(s)	634
MlyI	GAGTC	1 cut(s)	864
MnlI	CCTC	9 cut(s)	73, 139, 361, 433, 445, 592, 658, 811, 879
Mox20I	TGGCCA	1 cut(s)	634
MscI	TGGCCA	1 cut(s)	634
MseI	TTAA	2 cut(s)	162, 318
Msp20I	TGGCCA	1 cut(s)	634
MspA1I	CMGCKG	1 cut(s)	833
MvnI	CGCG	1 cut(s)	270
MwoI	GCNNNNNNNGC	5 cut(s)	155, 229, 333, 433, 579
NdeII	GATC	6 cut(s)	20, 117, 295, 646, 654, 759
NlaIII	CATG	5 cut(s)	158, 305, 476, 609, 614
NlaIV	GGNNCC	1 cut(s)	848
NmuCI	GTSAC	1 cut(s)	545
NspI	RCATGY	1 cut(s)	158
PflMI	CCANNNNNTGG	1 cut(s)	696
PkrI	GCNGC	5 cut(s)	252, 604, 710, 713, 802
PleI	GAGTC	1 cut(s)	864
PpsI	GAGTC	1 cut(s)	864
PspFI	CCCAGC	2 cut(s)	519, 676
PspN4I	GGNNCC	1 cut(s)	848
PspPI	GGNCC	4 cut(s)	86, 221, 343, 687
SaqAI	TTAA	2 cut(s)	162, 318
SatI	GCNGC	5 cut(s)	251, 603, 709, 712, 801
Sau3AI	GATC	6 cut(s)	20, 117, 295, 646, 654, 759
Sau96I	GGNCC	4 cut(s)	86, 221, 343, 687
SchI	GAGTC	1 cut(s)	864
SduI	GDGCHC	1 cut(s)	234
SfaNI	GCATC	1 cut(s)	762
SinI	GGWCC	1 cut(s)	86
Sse9I	AATT	3 cut(s)	100, 457, 465
SsiI	CCGC	6 cut(s)	8, 268, 393, 708, 711, 831
SspMI	CTAG	1 cut(s)	137
StyI	CCWWGG	1 cut(s)	701
TaaI	ACNGT	4 cut(s)	56, 86, 167, 740
TaiI	ACGT	1 cut(s)	128
TasI	AATT	3 cut(s)	100, 457, 465
TauI	GCSGC	2 cut(s)	711, 714
Tru1I	TTAA	2 cut(s)	162, 318
Tru9I	TTAA	2 cut(s)	162, 318
TscAI	CASTG	2 cut(s)	318, 561
TseFI	GTSAC	1 cut(s)	545
TseI	GCWGC	3 cut(s)	250, 602, 800
Tsp45I	GTSAC	1 cut(s)	545
TspRI	CASTG	2 cut(s)	318, 561
Van91I	CCANNNNNTGG	1 cut(s)	696
VpaK11BI	GGWCC	1 cut(s)	86
XapI	RAATTY	1 cut(s)	100
XceI	RCATGY	1 cut(s)	158
XspI	CTAG	1 cut(s)	137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.