Rmu_sc0002505.1_g000018

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002505.1
Physical Location & Seq
Forward (+)
67719 .. 69056
1338 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002505.1_g000018.1.cds

Sequence Viewer

Length: 1338 bp
atgtcatcagaatgcggtaacgtcctcctccggcgggcccaggctcatgtcgttctcctcccaagcgccggcatgggccctctgacaccctttctacgacttgccgcattgctatcccaaaaccaccgctgccagctgaccctcatcaccacccaccccactgtctcactcgccgagtcttctctcatctctcgcttcctctctgccttccctcacgtcactcaaatccatttccacctccttcctctcgaccccaccaccgtcaactcaacagacccctttttcctcagattagaagccattcgccgctccgctcatctcctctcccccctgctctcctctctttcctcgcctccctctgctctcgtttatgacgtgagcttaatatctcctgtcctcaccgtcattgaagctctttcgtttcgccttcctgcatacattttcttcacctcctcagccagaatgctctccctcttttcttactaccacctggtggcaaccacattgaatctgggatttggtggtgatgttgttgaaattcctagcattaatcctccagtacgcatatcttcagtccctccgctacttctgactcccaatagtctcttcgctaatatattcatgcaggacggtccaaaactccctagatttaacgggattttgatcaatactttcgacgggatagaaacagaggcggtggagttgctgaatggaggaaacgtaatcgaagcgttgcctccactatttgctgttgggcctttagtgccctgtgagtttgagaaggttgatgatgatcaattgggaaatgcacaactattgaagtggcttgatgatcaggctgaagggtcagtggtgtatgtgagctttggaagcagaacagctctctcaagagatcagatcaaagagcttggtgatgggttggtgagatgtgggtttcggtttctatgggtggtgaaggagaagctagtagacagagaggaagaagagggtagtttggagattatggagaaaatggagggcaaagggttggtggtgaagcattgggtggaccaaggagacatcttgggtcacaaggcagtgggagggtttttgagtcactgtggttggaattcagtggtggaagctgcctggtatggtgtaagaatcctagcttggccacaacatggggatcagaagctcaatgcagaggtggttgagagaagtgggcttgggatatgggccagaacttgggcctggaccggagatgacccggtggtggtggtgaagggggaagacattgctgtgaagatcaaagagctgatgcagagtgaaggctttgaagattggagaagaggctaa

Protein Analysis

445

Amino Acids

49.04

Weight (kDa)

5.42

Isoelectric Point (pI)

42.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 493, 1163, 1227
AccBSI CCGCTC 2 cut(s) 309, 314
AccI GTMKAC 1 cut(s) 969
AciI CCGC 8 cut(s) 15, 34, 105, 127, 307, 312, 581, 695
AclWI GGATC 1 cut(s) 1176
AcoI YGGCCR 1 cut(s) 1154
AcsI RAATTY 2 cut(s) 537, 1108
AcuI CTGAAG 2 cut(s) 555, 861
AdeI CACNNNGTG 1 cut(s) 493
AfaI GTAC 1 cut(s) 561
AfiI CCNNNNNNNGG 6 cut(s) 34, 68, 493, 1163, 1227, 1255
AgsI TTSAA 5 cut(s) 410, 508, 536, 820, 1319
AjiI CACGTC 2 cut(s) 217, 376
AjnI CCWGG 4 cut(s) 39, 489, 1127, 1232
AjuI GAANNNNNNNTTGG 4 cut(s) 590, 622, 1135, 1167
Alw26I GTCTC 3 cut(s) 169, 608, 1050
AlwI GGATC 1 cut(s) 1176
AoxI GGCC 6 cut(s) 36, 76, 755, 1154, 1218, 1230
ApaI GGGCCC 2 cut(s) 40, 80
ApeKI GCWGC 2 cut(s) 129, 1124
ApoI RAATTY 2 cut(s) 537, 1108
AseI ATTAAT 1 cut(s) 549
Asp700I GAANNNNTTC 1 cut(s) 300
AspLEI GCGC 1 cut(s) 68
AsuC2I CCSGG 1 cut(s) 1250
AsuHPI GGTGA 9 cut(s) 139, 391, 439, 536, 923, 934, 964, 1045, 1273
AvaII GGWCC 3 cut(s) 632, 1048, 1236
BaeGI GKGCMC 3 cut(s) 40, 80, 768
BalI TGGCCA 1 cut(s) 1156
BanII GRGCYC 2 cut(s) 40, 80
BbsI GAAGAC 2 cut(s) 171, 1278
BbvCI CCTCAGC 1 cut(s) 454
BbvI GCAGC 2 cut(s) 116, 1111
BccI CCATC 1 cut(s) 908
BciT130I CCWGG 4 cut(s) 41, 491, 1129, 1234
BclI TGATCA 3 cut(s) 663, 793, 832
BcnI CCSGG 1 cut(s) 1250
BcoDI GTCTC 3 cut(s) 169, 608, 1050
BfaI CTAG 4 cut(s) 543, 645, 965, 1148
BfoI RGCGCY 1 cut(s) 69
BisI GCNGC 4 cut(s) 105, 130, 307, 1125
BlsI GCNGC 4 cut(s) 106, 131, 308, 1126
Bme1390I CCNGG 5 cut(s) 41, 491, 1129, 1234, 1250
Bme18I GGWCC 3 cut(s) 632, 1048, 1236
BmgBI CACGTC 2 cut(s) 217, 376
BmiI GGNNCC 2 cut(s) 38, 78
BmrFI CCNGG 5 cut(s) 41, 491, 1129, 1234, 1250
BmsI GCATC 1 cut(s) 1290
BpiI GAAGAC 2 cut(s) 171, 1278
BpmI CTGGAG 1 cut(s) 540
Bpu10I CCTNAGC 1 cut(s) 454
BpuEI CTTGAG 1 cut(s) 871
BpuMI CCSGG 1 cut(s) 1250
BsaBI GATNNNNATC 2 cut(s) 662, 792
BsaJI CCNNGG 2 cut(s) 39, 1051
BsaWI WCCGGW 1 cut(s) 1238
BsaXI ACNNNNNCTCC 2 cut(s) 705, 735
Bsc4I CCNNNNNNNGG 6 cut(s) 34, 68, 493, 1163, 1227, 1255
Bse118I RCCGGY 1 cut(s) 68
Bse1I ACTGG 1 cut(s) 557
Bse3DI GCAATG 2 cut(s) 107, 1275
Bse8I GATNNNNATC 2 cut(s) 662, 792
BseBI CCWGG 4 cut(s) 41, 491, 1129, 1234
BseDI CCNNGG 2 cut(s) 39, 1051
BseJI GATNNNNATC 2 cut(s) 662, 792
BseLI CCNNNNNNNGG 6 cut(s) 34, 68, 493, 1163, 1227, 1255
BseMI GCAATG 2 cut(s) 107, 1275
BseMII CTCAG 2 cut(s) 301, 468
BseNI ACTGG 1 cut(s) 557
BseRI GAGGAG 5 cut(s) 17, 47, 311, 328, 442
BseSI GKGCMC 3 cut(s) 40, 80, 768
BseXI GCAGC 2 cut(s) 116, 1111
BshFI GGCC 6 cut(s) 38, 78, 757, 1156, 1220, 1232
BsiSI CCGG 4 cut(s) 31, 69, 1239, 1250
BslFI GGGAC 1 cut(s) 560
BslI CCNNNNNNNGG 6 cut(s) 34, 68, 493, 1163, 1227, 1255
BsmAI GTCTC 3 cut(s) 169, 608, 1050
BsmFI GGGAC 1 cut(s) 560
BsmI GAATGC 2 cut(s) 17, 468
BsnI GGCC 6 cut(s) 38, 78, 757, 1156, 1220, 1232
Bsp120I GGGCCC 2 cut(s) 36, 76
Bsp1286I GDGCHC 3 cut(s) 40, 80, 768
Bsp143I GATC 7 cut(s) 663, 793, 832, 892, 897, 1168, 1287
BspACI CCGC 8 cut(s) 15, 34, 105, 127, 307, 312, 581, 695
BspANI GGCC 6 cut(s) 38, 78, 757, 1156, 1220, 1232
BspCNI CTCAG 2 cut(s) 300, 467
BspLI GGNNCC 2 cut(s) 38, 78
BspPI GGATC 1 cut(s) 1176
BsrBI CCGCTC 2 cut(s) 309, 314
BsrDI GCAATG 2 cut(s) 107, 1275
BsrFI RCCGGY 1 cut(s) 68
BsrI ACTGG 1 cut(s) 557
BssAI RCCGGY 1 cut(s) 68
BssECI CCNNGG 2 cut(s) 39, 1051
BssMI GATC 7 cut(s) 663, 793, 832, 892, 897, 1168, 1287
BssT1I CCWWGG 1 cut(s) 1051
Bst2UI CCWGG 4 cut(s) 41, 491, 1129, 1234
Bst4CI ACNGT 5 cut(s) 163, 262, 403, 632, 1100
Bst6I CTCTTC 3 cut(s) 611, 978, 1324
BstC8I GCNNGC 3 cut(s) 36, 70, 134
BstDEI CTNAG 2 cut(s) 287, 454
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 1 cut(s) 68
BstKTI GATC 7 cut(s) 666, 796, 835, 895, 900, 1171, 1290
BstMAI GTCTC 3 cut(s) 169, 608, 1050
BstMBI GATC 7 cut(s) 663, 793, 832, 892, 897, 1168, 1287
BstMWI GCNNNNNNNGC 2 cut(s) 763, 870
BstNI CCWGG 4 cut(s) 41, 491, 1129, 1234
BstSCI CCNGG 5 cut(s) 39, 489, 1127, 1232, 1248
BstSLI GKGCMC 3 cut(s) 40, 80, 768
BstV1I GCAGC 2 cut(s) 116, 1111
BstV2I GAAGAC 2 cut(s) 171, 1278
BsuRI GGCC 6 cut(s) 38, 78, 757, 1156, 1220, 1232
BtrI CACGTC 2 cut(s) 217, 376
BtsI GCAGTG 1 cut(s) 1083
BtsIMutI CAGTG 5 cut(s) 159, 855, 1083, 1096, 1119
Cac8I GCNNGC 3 cut(s) 36, 70, 134
CfoI GCGC 1 cut(s) 68
Cfr10I RCCGGY 1 cut(s) 68
CsiI ACCWGGT 1 cut(s) 489
Csp6I GTAC 1 cut(s) 560
CviAII CATG 4 cut(s) 47, 73, 622, 1163
CviQI GTAC 1 cut(s) 560
DdeI CTNAG 2 cut(s) 287, 454
DpnI GATC 7 cut(s) 665, 795, 834, 894, 899, 1170, 1289
DpnII GATC 7 cut(s) 663, 793, 832, 892, 897, 1168, 1287
DraIII CACNNNGTG 1 cut(s) 493
EaeI YGGCCR 1 cut(s) 1154
Eam1104I CTCTTC 3 cut(s) 611, 978, 1324
EarI CTCTTC 3 cut(s) 611, 978, 1324
Eco130I CCWWGG 1 cut(s) 1051
Eco24I GRGCYC 2 cut(s) 40, 80
Eco47I GGWCC 3 cut(s) 632, 1048, 1236
Eco57I CTGAAG 2 cut(s) 555, 861
EcoO109I RGGNCCY 1 cut(s) 77
EcoRI GAATTC 1 cut(s) 1108
EcoRII CCWGG 4 cut(s) 39, 489, 1127, 1232
EcoT14I CCWWGG 1 cut(s) 1051
EcoT38I GRGCYC 2 cut(s) 40, 80
ErhI CCWWGG 1 cut(s) 1051
FaeI CATG 4 cut(s) 50, 76, 625, 1166
FaqI GGGAC 1 cut(s) 560
FatI CATG 4 cut(s) 46, 72, 621, 1162
FauI CCCGC 1 cut(s) 27
FbaI TGATCA 3 cut(s) 663, 793, 832
FblI GTMKAC 1 cut(s) 969
Fnu4HI GCNGC 4 cut(s) 105, 130, 307, 1125
FriOI GRGCYC 2 cut(s) 40, 80
Fsp4HI GCNGC 4 cut(s) 105, 130, 307, 1125
FspBI CTAG 4 cut(s) 543, 645, 965, 1148
GlaI GCGC 1 cut(s) 67
GluI GCNGC 4 cut(s) 105, 130, 307, 1125
GsuI CTGGAG 1 cut(s) 540
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 6 cut(s) 38, 78, 757, 1156, 1220, 1232
HapII CCGG 4 cut(s) 31, 69, 1239, 1250
HhaI GCGC 1 cut(s) 68
Hin1II CATG 4 cut(s) 50, 76, 625, 1166
Hin6I GCGC 1 cut(s) 66
HinP1I GCGC 1 cut(s) 66
HincII GTYRAC 1 cut(s) 265
HindII GTYRAC 1 cut(s) 265
HinfI GANTC 5 cut(s) 176, 508, 592, 1093, 1143
HpaII CCGG 4 cut(s) 31, 69, 1239, 1250
HphI GGTGA 9 cut(s) 139, 391, 439, 536, 923, 934, 964, 1045, 1273
Hpy166II GTNNAC 3 cut(s) 265, 970, 1048
Hpy188I TCNGA 6 cut(s) 10, 84, 290, 591, 897, 1173
Hpy188III TCNNGA 2 cut(s) 248, 888
Hpy8I GTNNAC 3 cut(s) 265, 970, 1048
Hpy99I CGWCG 1 cut(s) 680
HpyAV CCTTC 8 cut(s) 217, 251, 437, 775, 836, 949, 1258, 1304
HpyCH4III ACNGT 5 cut(s) 163, 262, 403, 632, 1100
HpyCH4IV ACGT 4 cut(s) 21, 216, 375, 720
HpyCH4V TGCA 5 cut(s) 434, 625, 809, 1184, 1303
HpyF10VI GCNNNNNNNGC 2 cut(s) 763, 870
HpyF3I CTNAG 2 cut(s) 287, 454
HpySE526I ACGT 4 cut(s) 21, 216, 375, 720
Hsp92II CATG 4 cut(s) 50, 76, 625, 1166
HspAI GCGC 1 cut(s) 66
KroI GCCGGC 1 cut(s) 68
KroNI GCCGGC 1 cut(s) 70
Ksp22I TGATCA 3 cut(s) 663, 793, 832
Kzo9I GATC 7 cut(s) 663, 793, 832, 892, 897, 1168, 1287
LmnI GCTCC 1 cut(s) 314
Lsp1109I GCAGC 2 cut(s) 116, 1111
LweI GCATC 1 cut(s) 1290
MabI ACCWGGT 1 cut(s) 489
MaeI CTAG 4 cut(s) 543, 645, 965, 1148
MaeII ACGT 4 cut(s) 21, 216, 375, 720
MaeIII GTNAC 4 cut(s) 17, 217, 1067, 1094
MalI GATC 7 cut(s) 665, 795, 834, 894, 899, 1170, 1289
MbiI CCGCTC 2 cut(s) 309, 314
MboI GATC 7 cut(s) 663, 793, 832, 892, 897, 1168, 1287
MboII GAAGA 9 cut(s) 171, 436, 561, 598, 992, 995, 1283, 1297, 1331
MfeI CAATTG 1 cut(s) 797
MhlI GDGCHC 3 cut(s) 40, 80, 768
MlsI TGGCCA 1 cut(s) 1156
MluCI AATT 3 cut(s) 537, 797, 1108
MluNI TGGCCA 1 cut(s) 1156
MlyI GAGTC 3 cut(s) 185, 586, 1102
MmeI TCCRAC 1 cut(s) 1085
Mox20I TGGCCA 1 cut(s) 1156
MroNI GCCGGC 1 cut(s) 68
MroXI GAANNNNTTC 1 cut(s) 300
MscI TGGCCA 1 cut(s) 1156
MseI TTAA 3 cut(s) 383, 549, 651
MslI CAYNNNNRTG 2 cut(s) 10, 1280
Msp20I TGGCCA 1 cut(s) 1156
MspA1I CMGCKG 2 cut(s) 129, 136
MspI CCGG 4 cut(s) 31, 69, 1239, 1250
MspR9I CCNGG 5 cut(s) 41, 491, 1129, 1234, 1250
MunI CAATTG 1 cut(s) 797
Mva1269I GAATGC 2 cut(s) 17, 468
MvaI CCWGG 4 cut(s) 41, 491, 1129, 1234
MwoI GCNNNNNNNGC 2 cut(s) 763, 870
NaeI GCCGGC 1 cut(s) 70
NciI CCSGG 1 cut(s) 1250
NdeII GATC 7 cut(s) 663, 793, 832, 892, 897, 1168, 1287
NgoMIV GCCGGC 1 cut(s) 68
NlaIII CATG 4 cut(s) 50, 76, 625, 1166
NlaIV GGNNCC 2 cut(s) 38, 78
NmeAIII GCCGAG 1 cut(s) 199
NmuCI GTSAC 3 cut(s) 217, 1067, 1094
PcsI WCGNNNNNNNCGW 1 cut(s) 372
PctI GAATGC 2 cut(s) 17, 468
PdiI GCCGGC 1 cut(s) 70
PdmI GAANNNNTTC 1 cut(s) 300
PfeI GAWTC 2 cut(s) 508, 1143
PflMI CCANNNNNTGG 3 cut(s) 493, 1163, 1227
PkrI GCNGC 4 cut(s) 106, 131, 308, 1126
PleI GAGTC 3 cut(s) 184, 586, 1101
PpsI GAGTC 3 cut(s) 184, 586, 1101
PshBI ATTAAT 1 cut(s) 549
Psp6I CCWGG 4 cut(s) 39, 489, 1127, 1232
PspGI CCWGG 4 cut(s) 39, 489, 1127, 1232
PspN4I GGNNCC 2 cut(s) 38, 78
PspOMI GGGCCC 2 cut(s) 36, 76
PvuII CAGCTG 1 cut(s) 136
RsaI GTAC 1 cut(s) 561
RsaNI GTAC 1 cut(s) 560
RseI CAYNNNNRTG 2 cut(s) 10, 1280
SaqAI TTAA 3 cut(s) 383, 549, 651
SatI GCNGC 4 cut(s) 105, 130, 307, 1125
Sau3AI GATC 7 cut(s) 663, 793, 832, 892, 897, 1168, 1287
SchI GAGTC 3 cut(s) 185, 586, 1102
ScrFI CCNGG 5 cut(s) 41, 491, 1129, 1234, 1250
SduI GDGCHC 3 cut(s) 40, 80, 768
SexAI ACCWGGT 1 cut(s) 489
SfaNI GCATC 1 cut(s) 1290
SinI GGWCC 3 cut(s) 632, 1048, 1236
SmiMI CAYNNNNRTG 2 cut(s) 10, 1280
SmlI CTYRAG 1 cut(s) 886
SmoI CTYRAG 1 cut(s) 886
Sse9I AATT 3 cut(s) 537, 797, 1108
SsiI CCGC 8 cut(s) 15, 34, 105, 127, 307, 312, 581, 695
SspMI CTAG 4 cut(s) 543, 645, 965, 1148
StyD4I CCNGG 5 cut(s) 39, 489, 1127, 1232, 1248
StyI CCWWGG 1 cut(s) 1051
TaaI ACNGT 5 cut(s) 163, 262, 403, 632, 1100
TaiI ACGT 4 cut(s) 24, 219, 378, 723
TaqI TCGA 3 cut(s) 249, 675, 726
TasI AATT 3 cut(s) 537, 797, 1108
TauI GCSGC 2 cut(s) 107, 309
TfiI GAWTC 2 cut(s) 508, 1143
Tru1I TTAA 3 cut(s) 383, 549, 651
Tru9I TTAA 3 cut(s) 383, 549, 651
TscAI CASTG 5 cut(s) 166, 855, 1083, 1103, 1119
TseFI GTSAC 3 cut(s) 217, 1067, 1094
TseI GCWGC 2 cut(s) 129, 1124
Tsp45I GTSAC 3 cut(s) 217, 1067, 1094
TspDTI ATGAA 1 cut(s) 610
TspRI CASTG 5 cut(s) 166, 855, 1083, 1103, 1119
Van91I CCANNNNNTGG 3 cut(s) 493, 1163, 1227
VpaK11BI GGWCC 3 cut(s) 632, 1048, 1236
VspI ATTAAT 1 cut(s) 549
XapI RAATTY 2 cut(s) 537, 1108
XcmI CCANNNNNNNNNTGG 1 cut(s) 508
XmiI GTMKAC 1 cut(s) 969
XmnI GAANNNNTTC 1 cut(s) 300
XspI CTAG 4 cut(s) 543, 645, 965, 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.