Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001611

Physical Location & Seq

Genomic Coordinates Reverse (-)

65529907 .. 65534714

Gene Structure 4808 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0525100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGCCAACTCAAACTCTCTTCCTCTCTATGAAAGGGTTGAGCACAGAAACACACTGCATAAAATCATGGAGTTTATAATCCTCTTCCTCCTCCTTTCACTCCTTGTTTATCGTCTCCTCTCATTCAACAACCATAAATTATCCTGGTCCATCGCATTTCTCTGCGAGCTCTGGTTTACCTTCAGTTGGGTCATCACCATGAGCAACAAATGGAATCTTGTTGACCATAAACCATACCCCGACCGCCTCTTGCAACGGGTGCCTAAGGATGAGCTTCCAGCAGTAGACTTGTTTGTGACCACAGCAGACCCAGAGCTTGAACCACCTATCATTACCATAAACACCGTTCTGTCTCTGTTGGCAGTTGATTACCCAACAGACAAACTAGCATGCTATGTTTCTGATGATGGGTGTTCCCCTATCACCTTTTACTCACTTGTGGAAGCATCGAAGTTTGCTAAGATTTGGGTTCCCTTTTGCAAAAAGTACAATGTTCAAGTTAGAGCTCCTTTTAGATACTTCACCAATAATTCCACGCTTTCTGGAAATAATAATAATAATAATAATAGCTCAATGGAATTCAAGCATGAATGGAAGATGGTGAAGGATGAGTATGAGCAACTTAGCAGCAAAATCGAGGATGTGGTGCGCAAATCTATCAATCCATCTGATATTATTGAAGGCGACTTTTTAGTTTTCTCAAATGTACAACGTAATAATCATCCAACAATAATCAAGGTTGTATGGGAGAACAAAGAAGCACATTCGAATCGATCAGTGCCGCATTTAGTATATATATCCAGAGAAAAACGGCCAAAGCGTCCACATCATGCCAAAGCTGGGGCCATGAATGTTCTGACTAGAGTCTCTGGGTTGATGACTAATGCTCCATACATGCTAAACGTGGACTGTGACATGTTCGCCAGCAGCCCGAACATTATTCTTCATGCAATGTGTATGCTACTTGGATCAAAGAATGAAAATGAAAATGCATTTGTTCAGTGTCCTCAAGCCTTCTATGGCGGTCTAAAGGATGATCCTTTTGGAAATCAGATGGTAGTTTTGTGGAAGTATGTAGCGCACGGAATTTCGGGAATTCAGGGGCCTTTTTATTCCGGAACAGGATGTGTTCATAGACGAAAAGTCATCTATGGTCTATCCCCCAATTATGTGAAAGTTGGAGAAACAAATGCAAAAAGCATGATGCACGGTAAATCAGTCGATGAAGAACTACTTGATATGTTTGGGAAGGAATTCACCAAATCAGCTGCTGATGCTTTGAACGGGAAGGCAGAGTGTTCTAACATGCTTGCGAAAACTATTGAGGCTGCTTACTTAGTTGCTGGTGTTGGATATGAGTATGGCACACAATGGGGCAAAAAGGTGGGATGGATGTATGGATCCACAACTGAAGATGTCCTCACTGGGCTTTCAATCCATAACAAAGGTTGGAGATCCATTCTTTATGCACCAGACCCACCAGCCTTTCTAGGATGCGCACCTACTGGTGGACCTGCTTCAATGACCCAACAAAAAAGGTGGGCCACCGGCCTGCTTGAAATCCTCCTCAGCACAAACTGTCCCATATTTGGCACTCTCTTTGCAAACCTCCAGTTCAGGCAGTGCTTGGCCTACTTCTGGATCCTTTCATGGGGCCTACGCGCAGTTCCCGAGCTGTGCTATGCTGCTCTGCCAGCCTATAGTATCATCACCAACTCACACTTCTTGCCCAAGGGCCAAGAACCAGCTTACTATATACCCATATCTGTGTTTCTGTTCTACAATTTGTGCACTTTATTAGAGTACCTTAGAACCAGTCTATCAATCCGAGCATGGTGGAATAACCAAAGAATGGGAAGAATAACCACAATGAGTGCATGGCTTTTTGGATTTCTTGGTGTTATACTCAAACTCTTGGGCATATCCGAGACAGTCTTTGAAGTAACACGGAAAGACCAATCTACTTCAAGCGATGAAGGCACTGAAGATACTGAAGCCGGAAAATTCACCTTTGACCAGTCCCCAGTTTTCGTACCTCCCACAGCAATGTTGTTTATGCAATTAACAGCACTGGCCACCGCTTTGTTGGGGCTTCAACCACCTGCCCGTGATGGGGTGGGATCAGGCTCTTTGGAGACCATGTGCAGTGTTTTGTTGGTGGTATGCTTATTACCATTTTTGAAAGGTCTGTTTGGATCAGGAAAATATGGAATTCCTCTGTCTACCATATTTAAGTCTGCTGGTCTTGCACTACTCTTCTACACCTTGTGCAGATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0047243 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

759

Amino Acids

85.2

Weight (kDa)

8.29

Isoelectric Point (pI)

39.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	95 - 397	2.3e-86	Cellulose synthase
Cellulose_synt	PF03552	428 - 735	1.1e-51	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001611)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g47620
malus_domestica	MD16G1064500.v1.1 MD16G1276100.v1.1 MD17G1055500.v1.1
prunus_persica	Prupe.1G282300_v2.0.a1 Prupe.3G260200_v2.0.a1
pyrus_communis	pycom16g05630 pycom16g05640 pycom17g05420
rosa_chinensis	RchiOBHm_Chr2g0166721 RchiOBHm_Chr4g0438831 RchiOBHm_Chr4g0438841
rosa_laevigata	RLG00000006326 RLG00000006327 RLG00000021642
rosa_multiflora	Rmu_co8237817.1_g000001 Rmu_sc0000431.1_g000011 Rmu_sc0002181.1_g000012 Rmu_sc0002505.1_g000018 Rmu_sc0002505.1_g000020 Rmu_sc0003748.1_g000012 Rmu_sc0005433.1_g000002 Rmu_sc0007415.1_g000054 Rmu_sc0009639.1_g000019 Rmu_sc0023543.1_g000001 Rmu_sc0041865.1_g000001
rosa_roxburghii	Rroxscaffold_2G00084290 Rroxscaffold_2G00084610 Rroxscaffold_5G00379870
rosa_rugosa	Rorug02G0525100 Rorug04G0313400 Rorug04G0313400
rosa_samantha	Rh1AG297400 Rh2AG591400 Rh2BG000200 Rh2BG603100 Rh2CG574200 Rh2DG614000 Rh4AG192000 Rh4AG364400 Rh4BG375500 Rh4CG389600 Rh4DG370100 Rh4DG370200 Rh5DG208500 Rh7CG204500
rosa_wichuraiana	Rw0G007250 Rw0G016800 Rw2G049270 Rw4G016330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	77
AarI	CACCTGC	1 cut(s)	2110
Acc16I	TGCGCA	2 cut(s)	650, 1498
Acc36I	ACCTGC	2 cut(s)	1522, 2110
AccB1I	GGYRCC	1 cut(s)	259
AccB7I	CCANNNNNTGG	1 cut(s)	1852
AccI	GTMKAC	2 cut(s)	285, 2222
AccII	CGCG	1 cut(s)	1662
AccIII	TCCGGA	1 cut(s)	1115
AciI	CCGC	4 cut(s)	244, 782, 1023, 2079
AclWI	GGATC	9 cut(s)	976, 1031, 1395, 1408, 1449, 1636, 1649, 2128, 2203
AcoI	YGGCCR	3 cut(s)	3, 812, 2073
AcsI	RAATTY	6 cut(s)	578, 1086, 1095, 1253, 2003, 2211
AcuI	CTGAAG	4 cut(s)	166, 1431, 2004, 2013
AdeI	CACNNNGTG	1 cut(s)	2268
AfaI	GTAC	4 cut(s)	488, 708, 1805, 2034
AfiI	CCNNNNNNNGG	9 cut(s)	186, 840, 1508, 1589, 1638, 1651, 1852, 2112, 2113
AflIII	ACRYGT	1 cut(s)	915
AhdI	GACNNNNNGTC	1 cut(s)	1142
AjnI	CCWGG	1 cut(s)	143
AjuI	GAANNNNNNNTTGG	2 cut(s)	1706, 1738
AluBI	AGCT	9 cut(s)	169, 274, 316, 506, 570, 839, 1268, 1675, 1748
AluI	AGCT	9 cut(s)	169, 274, 316, 506, 570, 839, 1268, 1675, 1748
Alw21I	GWGCWC	4 cut(s)	45, 171, 508, 1793
Alw26I	GTCTC	5 cut(s)	119, 357, 871, 1922, 2129
Alw44I	GTGCAC	1 cut(s)	1789
AlwI	GGATC	9 cut(s)	976, 1031, 1395, 1408, 1449, 1636, 1649, 2128, 2203
AlwNI	CAGNNNCTG	1 cut(s)	1271
Ama87I	CYCGRG	1 cut(s)	1670
Aor13HI	TCCGGA	1 cut(s)	1115
ApaLI	GTGCAC	1 cut(s)	1789
ApeKI	GCWGC	5 cut(s)	627, 927, 1268, 1328, 1685
ApoI	RAATTY	6 cut(s)	578, 1086, 1095, 1253, 2003, 2211
Asp700I	GAANNNNTTC	1 cut(s)	1253
AspLEI	GCGC	4 cut(s)	651, 1081, 1499, 1664
AspS9I	GGNCC	7 cut(s)	147, 843, 1103, 1511, 1542, 1654, 1735
AsuHPI	GGTGA	7 cut(s)	187, 415, 514, 613, 1249, 1702, 1999
AsuII	TTCGAA	1 cut(s)	767
AvaI	CYCGRG	1 cut(s)	1670
AvaII	GGWCC	2 cut(s)	147, 1511
AxyI	CCTNAGG	1 cut(s)	264
BaeGI	GKGCMC	1 cut(s)	1793
BalI	TGGCCA	2 cut(s)	5, 2075
BamHI	GGATCC	2 cut(s)	1400, 1641
BanI	GGYRCC	1 cut(s)	259
BanII	GRGCYC	2 cut(s)	171, 508
Bbv12I	GWGCWC	4 cut(s)	45, 171, 508, 1793
BbvCI	CCTCAGC	1 cut(s)	1568
BbvI	GCAGC	5 cut(s)	639, 939, 1255, 1315, 1672
BccI	CCATC	7 cut(s)	158, 401, 592, 673, 1048, 1383, 2105
BceAI	ACGGC	1 cut(s)	827
BcgI	CGANNNNNNTGC	2 cut(s)	616, 650
BciT130I	CCWGG	1 cut(s)	145
BcoDI	GTCTC	5 cut(s)	119, 357, 871, 1922, 2129
BfaI	CTAG	3 cut(s)	386, 861, 1490
BfmI	CTRYAG	1 cut(s)	1699
BfuAI	ACCTGC	2 cut(s)	1522, 2110
BisI	GCNGC	6 cut(s)	628, 782, 928, 1269, 1329, 1686
BlsI	GCNGC	6 cut(s)	629, 783, 929, 1270, 1330, 1687
Bme1390I	CCNGG	1 cut(s)	145
Bme18I	GGWCC	2 cut(s)	147, 1511
BmeRI	GACNNNNNGTC	1 cut(s)	1142
BmeT110I	CYCGRG	1 cut(s)	1670
BmgT120I	GGNCC	7 cut(s)	147, 843, 1103, 1511, 1542, 1654, 1735
BmiI	GGNNCC	7 cut(s)	261, 471, 844, 1104, 1402, 1643, 1655
BmrFI	CCNGG	1 cut(s)	145
BmrI	ACTGGG	2 cut(s)	1434, 2018
BmsI	GCATC	4 cut(s)	455, 1194, 1264, 1484
BmuI	ACTGGG	2 cut(s)	1434, 2018
BoxI	GACNNNNGTC	1 cut(s)	863
BpmI	CTGGAG	1 cut(s)	1595
Bpu10I	CCTNAGC	1 cut(s)	1568
Bpu14I	TTCGAA	1 cut(s)	767
BpuEI	CTTGAG	1 cut(s)	993
Bsa29I	ATCGAT	1 cut(s)	772
BsaI	GGTCTC	1 cut(s)	2129
BsaJI	CCNNGG	1 cut(s)	1731
BsaWI	WCCGGW	1 cut(s)	1115
BsaXI	ACNNNNNCTCC	4 cut(s)	871, 901, 2126, 2156
Bsc4I	CCNNNNNNNGG	9 cut(s)	186, 840, 1508, 1589, 1638, 1651, 1852, 2112, 2113
Bse118I	RCCGGY	1 cut(s)	1547
Bse1I	ACTGG	7 cut(s)	1429, 1510, 1612, 1815, 2017, 2024, 2076
Bse21I	CCTNAGG	1 cut(s)	264
Bse3DI	GCAATG	2 cut(s)	957, 2052
BseAI	TCCGGA	1 cut(s)	1115
BseBI	CCWGG	1 cut(s)	145
BseCI	ATCGAT	1 cut(s)	772
BseDI	CCNNGG	1 cut(s)	1731
BseGI	GGATG	9 cut(s)	274, 613, 646, 721, 1039, 1130, 1394, 1398, 1499
BseLI	CCNNNNNNNGG	9 cut(s)	186, 840, 1508, 1589, 1638, 1651, 1852, 2112, 2113
BseMI	GCAATG	2 cut(s)	957, 2052
BseMII	CTCAG	1 cut(s)	1582
BseNI	ACTGG	7 cut(s)	1429, 1510, 1612, 1815, 2017, 2024, 2076
BseRI	GAGGAG	3 cut(s)	80, 107, 1556
BseSI	GKGCMC	1 cut(s)	1793
BseXI	GCAGC	5 cut(s)	639, 939, 1255, 1315, 1672
BseYI	CCCAGC	1 cut(s)	839
BsgI	GTGCAG	1 cut(s)	2164
Bsh1236I	CGCG	1 cut(s)	1662
Bsh1285I	CGRYCG	1 cut(s)	244
BshNI	GGYRCC	1 cut(s)	259
BshVI	ATCGAT	1 cut(s)	772
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	4 cut(s)	45, 171, 508, 1793
BsiHKCI	CYCGRG	1 cut(s)	1670
BsiSI	CCGG	3 cut(s)	1116, 1548, 1998
BslFI	GGGAC	2 cut(s)	1566, 2005
BslI	CCNNNNNNNGG	9 cut(s)	186, 840, 1508, 1589, 1638, 1651, 1852, 2112, 2113
BsmAI	GTCTC	5 cut(s)	119, 357, 871, 1922, 2129
BsmBI	CGTCTC	1 cut(s)	119
BsmFI	GGGAC	2 cut(s)	1566, 2005
Bso31I	GGTCTC	1 cut(s)	2129
BsoBI	CYCGRG	1 cut(s)	1670
Bsp119I	TTCGAA	1 cut(s)	767
Bsp1286I	GDGCHC	4 cut(s)	45, 171, 508, 1793
Bsp13I	TCCGGA	1 cut(s)	1115
Bsp1407I	TGTACA	1 cut(s)	706
Bsp143I	GATC	8 cut(s)	773, 968, 1036, 1400, 1454, 1641, 2120, 2195
BspACI	CCGC	4 cut(s)	244, 782, 1023, 2079
BspCNI	CTCAG	1 cut(s)	1581
BspDI	ATCGAT	1 cut(s)	772
BspEI	TCCGGA	1 cut(s)	1115
BspFNI	CGCG	1 cut(s)	1662
BspLI	GGNNCC	7 cut(s)	261, 471, 844, 1104, 1402, 1643, 1655
BspMI	ACCTGC	2 cut(s)	1522, 2110
BspPI	GGATC	9 cut(s)	976, 1031, 1395, 1408, 1449, 1636, 1649, 2128, 2203
BspT104I	TTCGAA	1 cut(s)	767
BspT107I	GGYRCC	1 cut(s)	259
BspTNI	GGTCTC	1 cut(s)	2129
BsrDI	GCAATG	2 cut(s)	957, 2052
BsrFI	RCCGGY	1 cut(s)	1547
BsrGI	TGTACA	1 cut(s)	706
BsrI	ACTGG	7 cut(s)	1429, 1510, 1612, 1815, 2017, 2024, 2076
BssAI	RCCGGY	1 cut(s)	1547
BssECI	CCNNGG	1 cut(s)	1731
BssMI	GATC	8 cut(s)	773, 968, 1036, 1400, 1454, 1641, 2120, 2195
BssT1I	CCWWGG	1 cut(s)	1731
Bst2UI	CCWGG	1 cut(s)	145
Bst4CI	ACNGT	5 cut(s)	346, 911, 1211, 1580, 1933
Bst6I	CTCTTC	3 cut(s)	24, 89, 2261
BstAPI	GCANNNNNTGC	1 cut(s)	259
BstAUI	TGTACA	1 cut(s)	706
BstBI	TTCGAA	1 cut(s)	767
BstC8I	GCNNGC	6 cut(s)	167, 391, 925, 1311, 1553, 1695
BstDEI	CTNAG	6 cut(s)	264, 459, 623, 1336, 1568, 1808
BstF5I	GGATG	9 cut(s)	274, 613, 646, 721, 1039, 1130, 1394, 1398, 1499
BstFNI	CGCG	1 cut(s)	1662
BstHHI	GCGC	4 cut(s)	651, 1081, 1499, 1664
BstKTI	GATC	8 cut(s)	776, 971, 1039, 1403, 1457, 1644, 2123, 2198
BstMAI	GTCTC	5 cut(s)	119, 357, 871, 1922, 2129
BstMBI	GATC	8 cut(s)	773, 968, 1036, 1400, 1454, 1641, 2120, 2195
BstMCI	CGRYCG	1 cut(s)	244
BstMWI	GCNNNNNNNGC	5 cut(s)	259, 1274, 1694, 1977, 2246
BstNI	CCWGG	1 cut(s)	145
BstNSI	RCATGY	4 cut(s)	393, 898, 919, 1309
BstPAI	GACNNNNGTC	1 cut(s)	863
BstSCI	CCNGG	1 cut(s)	143
BstSFI	CTRYAG	1 cut(s)	1699
BstSLI	GKGCMC	1 cut(s)	1793
BstUI	CGCG	1 cut(s)	1662
BstV1I	GCAGC	5 cut(s)	639, 939, 1255, 1315, 1672
BstX2I	RGATCY	3 cut(s)	1400, 1454, 1641
BstYI	RGATCY	3 cut(s)	1400, 1454, 1641
Bsu15I	ATCGAT	1 cut(s)	772
Bsu36I	CCTNAGG	1 cut(s)	264
BsuTUI	ATCGAT	1 cut(s)	772
BtgZI	GCGATG	2 cut(s)	136, 1986
BtsCI	GGATG	9 cut(s)	274, 613, 646, 721, 1039, 1130, 1394, 1398, 1499
BtsI	GCAGTG	3 cut(s)	53, 1628, 2152
BtsIMutI	CAGTG	8 cut(s)	53, 783, 1007, 1422, 1628, 1980, 2069, 2152
BveI	ACCTGC	2 cut(s)	1522, 2110
Cac8I	GCNNGC	6 cut(s)	167, 391, 925, 1311, 1553, 1695
CaiI	CAGNNNCTG	1 cut(s)	1271
CfoI	GCGC	4 cut(s)	651, 1081, 1499, 1664
Cfr10I	RCCGGY	1 cut(s)	1547
Cfr13I	GGNCC	7 cut(s)	147, 843, 1103, 1511, 1542, 1654, 1735
ClaI	ATCGAT	1 cut(s)	772
CseI	GACGC	1 cut(s)	809
Csp6I	GTAC	4 cut(s)	487, 707, 1804, 2033
CspCI	CAANNNNNGTGG	2 cut(s)	1520, 1555
CviQI	GTAC	4 cut(s)	487, 707, 1804, 2033
DdeI	CTNAG	6 cut(s)	264, 459, 623, 1336, 1568, 1808
DpnI	GATC	8 cut(s)	775, 970, 1038, 1402, 1456, 1643, 2122, 2197
DpnII	GATC	8 cut(s)	773, 968, 1036, 1400, 1454, 1641, 2120, 2195
DraIII	CACNNNGTG	1 cut(s)	2268
DriI	GACNNNNNGTC	1 cut(s)	1142
EaeI	YGGCCR	3 cut(s)	3, 812, 2073
Eam1104I	CTCTTC	3 cut(s)	24, 89, 2261
Eam1105I	GACNNNNNGTC	1 cut(s)	1142
EarI	CTCTTC	3 cut(s)	24, 89, 2261
Ecl136II	GAGCTC	2 cut(s)	169, 506
Eco130I	CCWWGG	1 cut(s)	1731
Eco24I	GRGCYC	2 cut(s)	171, 508
Eco31I	GGTCTC	1 cut(s)	2129
Eco47I	GGWCC	2 cut(s)	147, 1511
Eco53kI	GAGCTC	2 cut(s)	169, 506
Eco57I	CTGAAG	4 cut(s)	166, 1431, 2004, 2013
Eco81I	CCTNAGG	1 cut(s)	264
Eco88I	CYCGRG	1 cut(s)	1670
EcoICRI	GAGCTC	2 cut(s)	169, 506
EcoO109I	RGGNCCY	2 cut(s)	1103, 1654
EcoRI	GAATTC	4 cut(s)	578, 1095, 1253, 2211
EcoRII	CCWGG	1 cut(s)	143
EcoT14I	CCWWGG	1 cut(s)	1731
EcoT22I	ATGCAT	1 cut(s)	994
EcoT38I	GRGCYC	2 cut(s)	171, 508
ErhI	CCWWGG	1 cut(s)	1731
Esp3I	CGTCTC	1 cut(s)	119
FalI	AAGNNNNNCTT	2 cut(s)	1218, 1250
FaqI	GGGAC	2 cut(s)	1566, 2005
FblI	GTMKAC	2 cut(s)	285, 2222
Fnu4HI	GCNGC	6 cut(s)	628, 782, 928, 1269, 1329, 1686
FokI	GGATG	9 cut(s)	281, 620, 653, 708, 1046, 1137, 1401, 1405, 1506
FriOI	GRGCYC	2 cut(s)	171, 508
Fsp4HI	GCNGC	6 cut(s)	628, 782, 928, 1269, 1329, 1686
FspAI	RTGCGCAY	1 cut(s)	1498
FspBI	CTAG	3 cut(s)	386, 861, 1490
FspI	TGCGCA	2 cut(s)	650, 1498
GlaI	GCGC	4 cut(s)	650, 1080, 1498, 1663
GluI	GCNGC	6 cut(s)	628, 782, 928, 1269, 1329, 1686
GsaI	CCCAGC	1 cut(s)	843
GsuI	CTGGAG	1 cut(s)	1595
HapII	CCGG	3 cut(s)	1116, 1548, 1998
HgaI	GACGC	1 cut(s)	809
HhaI	GCGC	4 cut(s)	651, 1081, 1499, 1664
Hin6I	GCGC	4 cut(s)	649, 1079, 1497, 1662
HinP1I	GCGC	4 cut(s)	649, 1079, 1497, 1662
HincII	GTYRAC	1 cut(s)	223
HindII	GTYRAC	1 cut(s)	223
HinfI	GANTC	3 cut(s)	214, 769, 864
HpaII	CCGG	3 cut(s)	1116, 1548, 1998
HphI	GGTGA	7 cut(s)	187, 415, 514, 613, 1249, 1702, 1999
Hpy166II	GTNNAC	8 cut(s)	177, 223, 286, 824, 907, 1511, 1791, 2223
Hpy188I	TCNGA	6 cut(s)	403, 670, 858, 1053, 1829, 1927
Hpy188III	TCNNGA	7 cut(s)	543, 801, 1092, 1116, 1639, 1670, 2199
Hpy8I	GTNNAC	8 cut(s)	177, 223, 286, 824, 907, 1511, 1791, 2223
HpyAV	CCTTC	7 cut(s)	190, 598, 674, 1024, 1243, 1282, 1970
HpyCH4III	ACNGT	5 cut(s)	346, 911, 1211, 1580, 1933
HpyCH4IV	ACGT	2 cut(s)	712, 903
HpyF10VI	GCNNNNNNNGC	5 cut(s)	259, 1274, 1694, 1977, 2246
HpyF3I	CTNAG	6 cut(s)	264, 459, 623, 1336, 1568, 1808
HpySE526I	ACGT	2 cut(s)	712, 903
HspAI	GCGC	4 cut(s)	649, 1079, 1497, 1662
Kpn2I	TCCGGA	1 cut(s)	1115
Kzo9I	GATC	8 cut(s)	773, 968, 1036, 1400, 1454, 1641, 2120, 2195
LmnI	GCTCC	2 cut(s)	511, 892
Lsp1109I	GCAGC	5 cut(s)	639, 939, 1255, 1315, 1672
LweI	GCATC	4 cut(s)	455, 1194, 1264, 1484
MaeI	CTAG	3 cut(s)	386, 861, 1490
MaeII	ACGT	2 cut(s)	712, 903
MaeIII	GTNAC	3 cut(s)	295, 911, 1942
MalI	GATC	8 cut(s)	775, 970, 1038, 1402, 1456, 1643, 2122, 2197
MboI	GATC	8 cut(s)	773, 968, 1036, 1400, 1454, 1641, 2120, 2195
MboII	GAAGA	9 cut(s)	11, 76, 607, 935, 1238, 1424, 1869, 1997, 2248
MflI	RGATCY	3 cut(s)	1400, 1454, 1641
MhlI	GDGCHC	4 cut(s)	45, 171, 508, 1793
MlsI	TGGCCA	2 cut(s)	5, 2075
MluNI	TGGCCA	2 cut(s)	5, 2075
MlyI	GAGTC	1 cut(s)	873
MmeI	TCCRAC	4 cut(s)	749, 1159, 1330, 1430
Mox20I	TGGCCA	2 cut(s)	5, 2075
Mph1103I	ATGCAT	1 cut(s)	994
MroI	TCCGGA	1 cut(s)	1115
MroXI	GAANNNNTTC	1 cut(s)	1253
MscI	TGGCCA	2 cut(s)	5, 2075
MseI	TTAA	2 cut(s)	2063, 2232
MslI	CAYNNNNRTG	3 cut(s)	197, 1766, 2045
Msp20I	TGGCCA	2 cut(s)	5, 2075
MspA1I	CMGCKG	1 cut(s)	1268
MspI	CCGG	3 cut(s)	1116, 1548, 1998
MspR9I	CCNGG	1 cut(s)	145
MvaI	CCWGG	1 cut(s)	145
MvnI	CGCG	1 cut(s)	1662
MwoI	GCNNNNNNNGC	5 cut(s)	259, 1274, 1694, 1977, 2246
NdeII	GATC	8 cut(s)	773, 968, 1036, 1400, 1454, 1641, 2120, 2195
NlaIV	GGNNCC	7 cut(s)	261, 471, 844, 1104, 1402, 1643, 1655
NmuCI	GTSAC	2 cut(s)	295, 911
NsbI	TGCGCA	2 cut(s)	650, 1498
NsiI	ATGCAT	1 cut(s)	994
NspI	RCATGY	4 cut(s)	393, 898, 919, 1309
NspV	TTCGAA	1 cut(s)	767
PaeI	GCATGC	1 cut(s)	393
PaqCI	CACCTGC	1 cut(s)	2110
PciI	ACATGT	1 cut(s)	915
PcsI	WCGNNNNNNNCGW	1 cut(s)	817
PdmI	GAANNNNTTC	1 cut(s)	1253
PfeI	GAWTC	2 cut(s)	214, 769
PflMI	CCANNNNNTGG	1 cut(s)	1852
PkrI	GCNGC	6 cut(s)	629, 783, 929, 1270, 1330, 1687
PleI	GAGTC	1 cut(s)	872
PpsI	GAGTC	1 cut(s)	872
PscI	ACATGT	1 cut(s)	915
PshAI	GACNNNNGTC	1 cut(s)	863
PsiI	TTATAA	1 cut(s)	77
Psp124BI	GAGCTC	2 cut(s)	171, 508
Psp6I	CCWGG	1 cut(s)	143
PspFI	CCCAGC	1 cut(s)	839
PspGI	CCWGG	1 cut(s)	143
PspN4I	GGNNCC	7 cut(s)	261, 471, 844, 1104, 1402, 1643, 1655
PspPI	GGNCC	7 cut(s)	147, 843, 1103, 1511, 1542, 1654, 1735
PstNI	CAGNNNCTG	1 cut(s)	1271
PsuI	RGATCY	3 cut(s)	1400, 1454, 1641
PvuII	CAGCTG	1 cut(s)	1268
RsaI	GTAC	4 cut(s)	488, 708, 1805, 2034
RsaNI	GTAC	4 cut(s)	487, 707, 1804, 2033
RseI	CAYNNNNRTG	3 cut(s)	197, 1766, 2045
SacI	GAGCTC	2 cut(s)	171, 508
SaqAI	TTAA	2 cut(s)	2063, 2232
SatI	GCNGC	6 cut(s)	628, 782, 928, 1269, 1329, 1686
Sau3AI	GATC	8 cut(s)	773, 968, 1036, 1400, 1454, 1641, 2120, 2195
Sau96I	GGNCC	7 cut(s)	147, 843, 1103, 1511, 1542, 1654, 1735
SchI	GAGTC	1 cut(s)	873
ScrFI	CCNGG	1 cut(s)	145
SduI	GDGCHC	4 cut(s)	45, 171, 508, 1793
SfaNI	GCATC	4 cut(s)	455, 1194, 1264, 1484
SfcI	CTRYAG	1 cut(s)	1699
SfuI	TTCGAA	1 cut(s)	767
SinI	GGWCC	2 cut(s)	147, 1511
SmiMI	CAYNNNNRTG	3 cut(s)	197, 1766, 2045
SmlI	CTYRAG	1 cut(s)	1008
SmoI	CTYRAG	1 cut(s)	1008
SphI	GCATGC	1 cut(s)	393
SsiI	CCGC	4 cut(s)	244, 782, 1023, 2079
SspMI	CTAG	3 cut(s)	386, 861, 1490
SstI	GAGCTC	2 cut(s)	171, 508
StyD4I	CCNGG	1 cut(s)	143
StyI	CCWWGG	1 cut(s)	1731
TaaI	ACNGT	5 cut(s)	346, 911, 1211, 1580, 1933
TaiI	ACGT	2 cut(s)	715, 906
TaqI	TCGA	5 cut(s)	449, 636, 767, 772, 1221
TatI	WGTACW	2 cut(s)	486, 706
TauI	GCSGC	1 cut(s)	784
TfiI	GAWTC	2 cut(s)	214, 769
Tru1I	TTAA	2 cut(s)	2063, 2232
Tru9I	TTAA	2 cut(s)	2063, 2232
TscAI	CASTG	8 cut(s)	60, 783, 1007, 1429, 1628, 1987, 2076, 2152
TseFI	GTSAC	2 cut(s)	295, 911
TseI	GCWGC	5 cut(s)	627, 927, 1268, 1328, 1685
Tsp45I	GTSAC	2 cut(s)	295, 911
TspGWI	ACGGA	2 cut(s)	1098, 1963
TspRI	CASTG	8 cut(s)	60, 783, 1007, 1429, 1628, 1987, 2076, 2152
Van91I	CCANNNNNTGG	1 cut(s)	1852
VneI	GTGCAC	1 cut(s)	1789
VpaK11BI	GGWCC	2 cut(s)	147, 1511
XapI	RAATTY	6 cut(s)	578, 1086, 1095, 1253, 2003, 2211
XceI	RCATGY	4 cut(s)	393, 898, 919, 1309
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2083
XmiI	GTMKAC	2 cut(s)	285, 2222
XmnI	GAANNNNTTC	1 cut(s)	1253
XspI	CTAG	3 cut(s)	386, 861, 1490
Zsp2I	ATGCAT	1 cut(s)	994

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.