pycom17g05420

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
3836820 .. 3838268
1449 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g05420.1

Sequence Viewer

Length: 1449 bp
ATGCCCTGCTCTAAAGGTAACCTACTTTCCCTTAGCAAAACATCATTGTCCATTAAAATGTCAGATTCCGGCGATCTACGAGTCCCTCATGTAGCTCTCCTTCCAAGTGCCGGAATGGGCCATCTCACACCCTTCCTTCGGCTTGCAGCGTTACTAGCATCACATAATGTTTGTGTCACTTTCATCACTCCAAATCCAACCGTCTCACTTGCCGAGTCACAGAGTTTGTCGAATTTCCTCATGGCCTTCCCACAAATTACTCGAAAGCAGCTTCATCTCCTTCCGCTCGACGAGTCCTGTGCCAATTCCGAAGACCCTTTTTACCACCATTTTGAATTGATTCGCCGCTCTTCTCACGTGCTCTCTCCTCTTTTATCTTCACTCTCTCCACCTCTCTCCGCTATGATCACAGACATGAGCTTCGCCTCCACGGTTCTTCCTGTAACCGATTCTCTCGGGCTTCCAAACTACATTTTCTTCACATCATCTGCCAAAATGTTGACACTTTATGTGTCCTTCCACACCATGCTTGGCCCTAATCACACTATAAAAGATGATCTCCAAGTTCCGGGTTTGGGGCCAATACCAAAATCACGGATGCCTCCACCACTGCTGCGGGAAAGTAACAATCTGCTGAAGACCTTTTTCATAGAGAATGGTAAGAAAATGACTGAATCAAGCGGAATTTTGGTGAACACATATGAAAGTATAGAGAGTGAGACTTTGGCAGCACTAAATGAAGGCAAAGTATTGAGAAAACTACCGTCAGTAATTTCCATCGGACCGCTAGCACCGTGTTTCTTCGAGACAAGCCAACAACTGCAATGGCTTGATGATCAAGCAACTGGGTCAGTGCTCTACGTCAGCTTTGGGAGCAGGACTGCCATGTCCAGGGAGCAAATTAGAGAGTTGGGTGATGGCTTGGTGAGGAGCGGTTGCAGGTTTCTGTGGGCGGTGAAGGATAAGAAAGTTGACATCGAAGATGACGAGAAACTGACTGAGGTGCTTGGAGAGGAATTATTGGAGAGGGTGAAGAAAAATGGATTGGCAGTGAAGAACTGGCTGAACCAGGAGGAGATATTGAGCCATCCGGCCATCGGTGGGTTTTTAAGTCACTGTGGCTGGAACTCTTTGTCTGAGGCTCTCTGGAACGGTGTGCGCATATTAGCATGGCCGCAACATGGGGATCAGAAAGTCAATGCAGATTTGGTGGAGAGAATTGGACTCGGAACGTGGGATAAGAGTTGGGGTTGGGGTGATGGGGAGATGTTGGTGAAAGCAGAGGACATTGCACAGAGGGTTAGTGAGATAATGGGAAATGACTTATTGAAGTTGCAAGCACTGCACATTAGAGACAATGCTAGAAGGGCGGTTGGAGATGGTGGTAGTTCAACAAAAAGTCTCACTGCTCTCATCGACACATGGAAGAAGTTTCAGGTACTAGCATAG

Protein Analysis

483

Amino Acids

53.1

Weight (kDa)

6.24

Isoelectric Point (pI)

50.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 283 - 408 5.8e-16 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 886
Acc16I TGCGCA 1 cut(s) 1160
Acc36I ACCTGC 1 cut(s) 930
AccBSI CCGCTC 3 cut(s) 286, 348, 933
AclWI GGATC 1 cut(s) 1194
AcoI YGGCCR 2 cut(s) 1092, 1172
AcsI RAATTY 2 cut(s) 232, 684
AcuI CTGAAG 1 cut(s) 656
AcvI CACGTG 1 cut(s) 358
AfaI GTAC 1 cut(s) 1440
AfiI CCNNNNNNNGG 8 cut(s) 110, 138, 568, 575, 891, 1097, 1101, 1181
AgsI TTSAA 3 cut(s) 335, 1330, 1392
AjnI CCWGG 2 cut(s) 890, 1068
AjuI GAANNNNNNNTTGG 2 cut(s) 1028, 1060
AluBI AGCT 4 cut(s) 95, 271, 420, 867
AluI AGCT 4 cut(s) 95, 271, 420, 867
Alw21I GWGCWC 2 cut(s) 363, 858
Alw26I GTCTC 5 cut(s) 208, 713, 800, 1347, 1406
AlwI GGATC 1 cut(s) 1194
Ama87I CYCGRG 1 cut(s) 455
AoxI GGCC 6 cut(s) 118, 243, 532, 578, 1092, 1172
ApeKI GCWGC 4 cut(s) 146, 268, 613, 728
ApoI RAATTY 2 cut(s) 232, 684
ArsI GACNNNNNNTTYG 2 cut(s) 404, 436
Asp700I GAANNNNTTC 1 cut(s) 339
AspLEI GCGC 1 cut(s) 1161
AspS9I GGNCC 4 cut(s) 118, 533, 578, 782
AsuC2I CCSGG 1 cut(s) 570
AsuHPI GGTGA 7 cut(s) 703, 926, 937, 967, 1042, 1268, 1285
AsuNHI GCTAGC 1 cut(s) 787
AvaI CYCGRG 1 cut(s) 455
AvaII GGWCC 1 cut(s) 782
BarI GAAGNNNNNNTAC 2 cut(s) 84, 116
BbrPI CACGTG 1 cut(s) 358
BbsI GAAGAC 2 cut(s) 318, 644
Bbv12I GWGCWC 2 cut(s) 363, 858
BbvI GCAGC 4 cut(s) 158, 280, 600, 740
BccI CCATC 7 cut(s) 129, 785, 911, 1095, 1103, 1253, 1373
BcgI CGANNNNNNTGC 2 cut(s) 281, 315
BciT130I CCWGG 2 cut(s) 892, 1070
BclI TGATCA 2 cut(s) 405, 835
BcnI CCSGG 1 cut(s) 570
BcoDI GTCTC 5 cut(s) 208, 713, 800, 1347, 1406
BfaI CTAG 4 cut(s) 155, 788, 1362, 1442
BfuAI ACCTGC 1 cut(s) 930
BisI GCNGC 6 cut(s) 147, 269, 346, 614, 729, 1175
BlsI GCNGC 6 cut(s) 148, 270, 347, 615, 730, 1176
Bme1390I CCNGG 3 cut(s) 570, 892, 1070
Bme18I GGWCC 1 cut(s) 782
BmeT110I CYCGRG 1 cut(s) 455
BmgT120I GGNCC 4 cut(s) 118, 533, 578, 782
BmiI GGNNCC 1 cut(s) 579
BmrFI CCNGG 3 cut(s) 570, 892, 1070
BmrI ACTGGG 1 cut(s) 855
BmsI GCATC 2 cut(s) 167, 588
BmtI GCTAGC 1 cut(s) 791
BmuI ACTGGG 1 cut(s) 855
BpiI GAAGAC 2 cut(s) 318, 644
Bpu10I CCTNAGC 1 cut(s) 32
BpuMI CCSGG 1 cut(s) 570
BsaAI YACGTR 1 cut(s) 358
BsaJI CCNNGG 2 cut(s) 429, 891
Bsc4I CCNNNNNNNGG 8 cut(s) 110, 138, 568, 575, 891, 1097, 1101, 1181
Bse1I ACTGG 2 cut(s) 850, 1064
Bse3DI GCAATG 2 cut(s) 830, 1287
BseBI CCWGG 2 cut(s) 892, 1070
BseDI CCNNGG 2 cut(s) 429, 891
BseGI GGATG 2 cut(s) 603, 1087
BseLI CCNNNNNNNGG 8 cut(s) 110, 138, 568, 575, 891, 1097, 1101, 1181
BseMI GCAATG 2 cut(s) 830, 1287
BseMII CTCAG 2 cut(s) 990, 1128
BseNI ACTGG 2 cut(s) 850, 1064
BseRI GAGGAG 3 cut(s) 357, 943, 1088
BseXI GCAGC 4 cut(s) 158, 280, 600, 740
BsgI GTGCAG 1 cut(s) 1328
BshFI GGCC 6 cut(s) 120, 245, 534, 580, 1094, 1174
BsiHKAI GWGCWC 2 cut(s) 363, 858
BsiHKCI CYCGRG 1 cut(s) 455
BsiSI CCGG 4 cut(s) 69, 111, 569, 1091
BslFI GGGAC 1 cut(s) 68
BslI CCNNNNNNNGG 8 cut(s) 110, 138, 568, 575, 891, 1097, 1101, 1181
BsmAI GTCTC 5 cut(s) 208, 713, 800, 1347, 1406
BsmBI CGTCTC 1 cut(s) 208
BsmFI GGGAC 1 cut(s) 68
BsnI GGCC 6 cut(s) 120, 245, 534, 580, 1094, 1174
BsoBI CYCGRG 1 cut(s) 455
Bsp1286I GDGCHC 2 cut(s) 363, 858
Bsp143I GATC 5 cut(s) 73, 405, 556, 835, 1186
BspANI GGCC 6 cut(s) 120, 245, 534, 580, 1094, 1174
BspCNI CTCAG 2 cut(s) 991, 1129
BspLI GGNNCC 1 cut(s) 579
BspMI ACCTGC 1 cut(s) 930
BspOI GCTAGC 1 cut(s) 791
BspPI GGATC 1 cut(s) 1194
BspQI GCTCTTC 1 cut(s) 355
BsrBI CCGCTC 3 cut(s) 286, 348, 933
BsrDI GCAATG 2 cut(s) 830, 1287
BsrI ACTGG 2 cut(s) 850, 1064
BssECI CCNNGG 2 cut(s) 429, 891
BssMI GATC 5 cut(s) 73, 405, 556, 835, 1186
Bst2UI CCWGG 2 cut(s) 892, 1070
Bst4CI ACNGT 6 cut(s) 202, 433, 765, 795, 1118, 1154
Bst6I CTCTTC 1 cut(s) 355
BstAPI GCANNNNNTGC 1 cut(s) 1342
BstBAI YACGTR 1 cut(s) 358
BstC8I GCNNGC 3 cut(s) 144, 789, 1338
BstDEI CTNAG 3 cut(s) 32, 999, 1137
BstDSI CCRYGG 1 cut(s) 429
BstEII GGTNACC 1 cut(s) 17
BstF5I GGATG 2 cut(s) 603, 1087
BstHHI GCGC 1 cut(s) 1161
BstKTI GATC 5 cut(s) 76, 408, 559, 838, 1189
BstMAI GTCTC 5 cut(s) 208, 713, 800, 1347, 1406
BstMBI GATC 5 cut(s) 73, 405, 556, 835, 1186
BstMWI GCNNNNNNNGC 4 cut(s) 155, 873, 1342, 1367
BstNI CCWGG 2 cut(s) 892, 1070
BstPI GGTNACC 1 cut(s) 17
BstSCI CCNGG 3 cut(s) 568, 890, 1068
BstV1I GCAGC 4 cut(s) 158, 280, 600, 740
BstV2I GAAGAC 2 cut(s) 318, 644
BsuRI GGCC 6 cut(s) 120, 245, 534, 580, 1094, 1174
BtgI CCRYGG 1 cut(s) 429
BtsCI GGATG 2 cut(s) 603, 1087
BtsI GCAGTG 4 cut(s) 608, 1056, 1340, 1404
BtsIMutI CAGTG 6 cut(s) 608, 858, 1056, 1114, 1340, 1404
BveI ACCTGC 1 cut(s) 930
Cac8I GCNNGC 3 cut(s) 144, 789, 1338
CfoI GCGC 1 cut(s) 1161
Cfr13I GGNCC 4 cut(s) 118, 533, 578, 782
CpoI CGGWCCG 1 cut(s) 782
Csp6I GTAC 1 cut(s) 1439
CspI CGGWCCG 1 cut(s) 782
CviAII CATG 8 cut(s) 89, 241, 415, 526, 886, 1170, 1181, 1422
CviQI GTAC 1 cut(s) 1439
DdeI CTNAG 3 cut(s) 32, 999, 1137
DpnI GATC 5 cut(s) 75, 407, 558, 837, 1188
DpnII GATC 5 cut(s) 73, 405, 556, 835, 1186
DrdI GACNNNNNNGTC 1 cut(s) 886
DseDI GACNNNNNNGTC 1 cut(s) 886
EaeI YGGCCR 2 cut(s) 1092, 1172
Eam1104I CTCTTC 1 cut(s) 355
EarI CTCTTC 1 cut(s) 355
Eco47I GGWCC 1 cut(s) 782
Eco57I CTGAAG 1 cut(s) 656
Eco72I CACGTG 1 cut(s) 358
Eco88I CYCGRG 1 cut(s) 455
Eco91I GGTNACC 1 cut(s) 17
EcoO65I GGTNACC 1 cut(s) 17
EcoRII CCWGG 2 cut(s) 890, 1068
Esp3I CGTCTC 1 cut(s) 208
FaeI CATG 8 cut(s) 92, 244, 418, 529, 889, 1173, 1184, 1425
FaqI GGGAC 1 cut(s) 68
FatI CATG 8 cut(s) 88, 240, 414, 525, 885, 1169, 1180, 1421
FauI CCCGC 1 cut(s) 609
FauNDI CATATG 1 cut(s) 700
FbaI TGATCA 2 cut(s) 405, 835
Fnu4HI GCNGC 6 cut(s) 147, 269, 346, 614, 729, 1175
FokI GGATG 2 cut(s) 610, 1074
Fsp4HI GCNGC 6 cut(s) 147, 269, 346, 614, 729, 1175
FspAI RTGCGCAY 1 cut(s) 1160
FspBI CTAG 4 cut(s) 155, 788, 1362, 1442
FspI TGCGCA 1 cut(s) 1160
GlaI GCGC 1 cut(s) 1160
GluI GCNGC 6 cut(s) 147, 269, 346, 614, 729, 1175
HaeIII GGCC 6 cut(s) 120, 245, 534, 580, 1094, 1174
HapII CCGG 4 cut(s) 69, 111, 569, 1091
HhaI GCGC 1 cut(s) 1161
Hin1II CATG 8 cut(s) 92, 244, 418, 529, 889, 1173, 1184, 1425
Hin6I GCGC 1 cut(s) 1159
HinP1I GCGC 1 cut(s) 1159
HincII GTYRAC 2 cut(s) 501, 973
HindII GTYRAC 2 cut(s) 501, 973
HinfI GANTC 8 cut(s) 65, 81, 215, 293, 340, 449, 674, 1224
HpaII CCGG 4 cut(s) 69, 111, 569, 1091
HphI GGTGA 7 cut(s) 703, 926, 937, 967, 1042, 1268, 1285
Hpy166II GTNNAC 3 cut(s) 501, 694, 973
Hpy188I TCNGA 6 cut(s) 64, 310, 782, 1138, 1191, 1229
Hpy188III TCNNGA 2 cut(s) 805, 1147
Hpy8I GTNNAC 3 cut(s) 501, 694, 973
Hpy99I CGWCG 1 cut(s) 293
HpyAV CCTTC 9 cut(s) 110, 142, 146, 256, 290, 526, 734, 952, 1359
HpyCH4III ACNGT 6 cut(s) 202, 433, 765, 795, 1118, 1154
HpyCH4IV ACGT 3 cut(s) 357, 861, 1232
HpyCH4V TGCA 7 cut(s) 146, 823, 939, 1202, 1292, 1336, 1345
HpyF10VI GCNNNNNNNGC 4 cut(s) 155, 873, 1342, 1367
HpyF3I CTNAG 3 cut(s) 32, 999, 1137
HpySE526I ACGT 3 cut(s) 357, 861, 1232
Hsp92II CATG 8 cut(s) 92, 244, 418, 529, 889, 1173, 1184, 1425
HspAI GCGC 1 cut(s) 1159
Ksp22I TGATCA 2 cut(s) 405, 835
Kzo9I GATC 5 cut(s) 73, 405, 556, 835, 1186
LguI GCTCTTC 1 cut(s) 355
LmnI GCTCC 3 cut(s) 873, 895, 930
Lsp1109I GCAGC 4 cut(s) 158, 280, 600, 740
LweI GCATC 2 cut(s) 167, 588
MaeI CTAG 4 cut(s) 155, 788, 1362, 1442
MaeII ACGT 3 cut(s) 357, 861, 1232
MaeIII GTNAC 7 cut(s) 17, 150, 175, 216, 442, 623, 1112
MalI GATC 5 cut(s) 75, 407, 558, 837, 1188
MbiI CCGCTC 3 cut(s) 286, 348, 933
MboI GATC 5 cut(s) 73, 405, 556, 835, 1186
MhlI GDGCHC 2 cut(s) 363, 858
MluCI AATT 9 cut(s) 232, 255, 304, 335, 684, 771, 900, 1016, 1218
MlyI GAGTC 4 cut(s) 90, 224, 302, 1218
MmeI TCCRAC 2 cut(s) 221, 1354
MroXI GAANNNNTTC 1 cut(s) 339
MseI TTAA 2 cut(s) 54, 1109
MslI CAYNNNNRTG 2 cut(s) 56, 413
MspI CCGG 4 cut(s) 69, 111, 569, 1091
MspR9I CCNGG 3 cut(s) 570, 892, 1070
MvaI CCWGG 2 cut(s) 892, 1070
MwoI GCNNNNNNNGC 4 cut(s) 155, 873, 1342, 1367
NciI CCSGG 1 cut(s) 570
NdeI CATATG 1 cut(s) 700
NdeII GATC 5 cut(s) 73, 405, 556, 835, 1186
NheI GCTAGC 1 cut(s) 787
NlaIII CATG 8 cut(s) 92, 244, 418, 529, 889, 1173, 1184, 1425
NlaIV GGNNCC 1 cut(s) 579
NmeAIII GCCGAG 1 cut(s) 238
NmuCI GTSAC 3 cut(s) 175, 216, 1112
NsbI TGCGCA 1 cut(s) 1160
PciSI GCTCTTC 1 cut(s) 355
PcsI WCGNNNNNNNCGW 1 cut(s) 984
PdmI GAANNNNTTC 1 cut(s) 339
PfeI GAWTC 4 cut(s) 65, 340, 449, 674
PkrI GCNGC 6 cut(s) 148, 270, 347, 615, 730, 1176
PleI GAGTC 4 cut(s) 89, 223, 301, 1218
PmaCI CACGTG 1 cut(s) 358
PmlI CACGTG 1 cut(s) 358
PpsI GAGTC 4 cut(s) 89, 223, 301, 1218
Ppu21I YACGTR 1 cut(s) 358
Psp6I CCWGG 2 cut(s) 890, 1068
PspCI CACGTG 1 cut(s) 358
PspEI GGTNACC 1 cut(s) 17
PspGI CCWGG 2 cut(s) 890, 1068
PspN4I GGNNCC 1 cut(s) 579
PspPI GGNCC 4 cut(s) 118, 533, 578, 782
RsaI GTAC 1 cut(s) 1440
RsaNI GTAC 1 cut(s) 1439
RseI CAYNNNNRTG 2 cut(s) 56, 413
Rsr2I CGGWCCG 1 cut(s) 782
RsrII CGGWCCG 1 cut(s) 782
SapI GCTCTTC 1 cut(s) 355
SaqAI TTAA 2 cut(s) 54, 1109
SatI GCNGC 6 cut(s) 147, 269, 346, 614, 729, 1175
Sau3AI GATC 5 cut(s) 73, 405, 556, 835, 1186
Sau96I GGNCC 4 cut(s) 118, 533, 578, 782
SchI GAGTC 4 cut(s) 90, 224, 302, 1218
ScrFI CCNGG 3 cut(s) 570, 892, 1070
SduI GDGCHC 2 cut(s) 363, 858
SfaNI GCATC 2 cut(s) 167, 588
SinI GGWCC 1 cut(s) 782
SmiMI CAYNNNNRTG 2 cut(s) 56, 413
Sse9I AATT 9 cut(s) 232, 255, 304, 335, 684, 771, 900, 1016, 1218
SspMI CTAG 4 cut(s) 155, 788, 1362, 1442
StyD4I CCNGG 3 cut(s) 568, 890, 1068
TaaI ACNGT 6 cut(s) 202, 433, 765, 795, 1118, 1154
TaiI ACGT 3 cut(s) 360, 864, 1235
TaqI TCGA 6 cut(s) 230, 262, 288, 804, 978, 1416
TasI AATT 9 cut(s) 232, 255, 304, 335, 684, 771, 900, 1016, 1218
TauI GCSGC 2 cut(s) 348, 1177
TfiI GAWTC 4 cut(s) 65, 340, 449, 674
Tru1I TTAA 2 cut(s) 54, 1109
Tru9I TTAA 2 cut(s) 54, 1109
TscAI CASTG 6 cut(s) 615, 858, 1056, 1121, 1347, 1411
TseFI GTSAC 3 cut(s) 175, 216, 1112
TseI GCWGC 4 cut(s) 146, 268, 613, 728
Tsp45I GTSAC 3 cut(s) 175, 216, 1112
TspDTI ATGAA 5 cut(s) 172, 263, 637, 717, 753
TspGWI ACGGA 1 cut(s) 610
TspRI CASTG 6 cut(s) 615, 858, 1056, 1121, 1347, 1411
VpaK11BI GGWCC 1 cut(s) 782
XapI RAATTY 2 cut(s) 232, 684
XcmI CCANNNNNNNNNTGG 1 cut(s) 527
XmnI GAANNNNTTC 1 cut(s) 339
XspI CTAG 4 cut(s) 155, 788, 1362, 1442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.