Rh4AG192000

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Reverse (-)
47315237 .. 47315608
372 bp
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UTR
Exon/CDS
Intron
Rh4AG192000.1

Sequence Viewer

Length: 372 bp
ATGAGTCCACAAGCTTCACAATGCGATTATGGTTGTATAAAGGAACATGTATCATTCATACTAGCATGGCTAGATGATCAACCAACTGGATCAGTGTTCTATGTCAGCTTTGGGAGTAGGACTGCAATGTCAAGGGAGCAAATCAAAGAGTTGGGTGAAGGCTTGGTGAGGACTGGGTTTAGGTTTCTGTGGGTCGTGAAAGATAAGAAAGTTGACATGGAAGACGATGAGAAACTGACTGAGGTGCTTGGACAGGGGTTACTGGAAAGAGTGAAGGAAAAGGGACCAGACTTGGCTGAACCAATAGGAGGTATTGAGGCATCCTGCAATCGGTGGTTTTTTAAGTCATTGTGGCTGGAATTCCTTGAGTGA

Protein Analysis

123

Amino Acids

14.04

Weight (kDa)

4.87

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 127
AclWI GGATC 1 cut(s) 97
AcsI RAATTY 1 cut(s) 359
AfiI CCNNNNNNNGG 2 cut(s) 308, 330
AflIII ACRYGT 1 cut(s) 46
AluBI AGCT 2 cut(s) 14, 108
AluI AGCT 2 cut(s) 14, 108
AlwI GGATC 1 cut(s) 97
ApoI RAATTY 1 cut(s) 359
AspS9I GGNCC 1 cut(s) 284
AsuHPI GGTGA 2 cut(s) 167, 178
AvaII GGWCC 1 cut(s) 284
BbsI GAAGAC 1 cut(s) 228
BclI TGATCA 1 cut(s) 76
BfaI CTAG 2 cut(s) 62, 71
Bme18I GGWCC 1 cut(s) 284
BmgT120I GGNCC 1 cut(s) 284
BmiI GGNNCC 1 cut(s) 285
BmrI ACTGGG 1 cut(s) 183
BmsI GCATC 1 cut(s) 329
BmuI ACTGGG 1 cut(s) 183
BpiI GAAGAC 1 cut(s) 228
Bsc4I CCNNNNNNNGG 2 cut(s) 308, 330
Bse1I ACTGG 3 cut(s) 91, 178, 267
Bse3DI GCAATG 1 cut(s) 132
BseGI GGATG 1 cut(s) 320
BseLI CCNNNNNNNGG 2 cut(s) 308, 330
BseMI GCAATG 1 cut(s) 132
BseMII CTCAG 1 cut(s) 231
BseNI ACTGG 3 cut(s) 91, 178, 267
BslFI GGGAC 1 cut(s) 297
BslI CCNNNNNNNGG 2 cut(s) 308, 330
BsmFI GGGAC 1 cut(s) 297
Bsp143I GATC 2 cut(s) 76, 89
BspCNI CTCAG 1 cut(s) 232
BspLI GGNNCC 1 cut(s) 285
BspPI GGATC 1 cut(s) 97
BsrDI GCAATG 1 cut(s) 132
BsrI ACTGG 3 cut(s) 91, 178, 267
BssMI GATC 2 cut(s) 76, 89
BstDEI CTNAG 1 cut(s) 240
BstF5I GGATG 1 cut(s) 320
BstKTI GATC 2 cut(s) 79, 92
BstMBI GATC 2 cut(s) 76, 89
BstNSI RCATGY 1 cut(s) 50
BstV2I GAAGAC 1 cut(s) 228
BtsCI GGATG 1 cut(s) 320
BtsIMutI CAGTG 1 cut(s) 99
Cfr13I GGNCC 1 cut(s) 284
CviAII CATG 3 cut(s) 47, 66, 217
CviJI RGCY 6 cut(s) 14, 70, 108, 162, 296, 355
CviKI_1 RGCY 6 cut(s) 14, 70, 108, 162, 296, 355
DdeI CTNAG 1 cut(s) 240
DpnI GATC 2 cut(s) 78, 91
DpnII GATC 2 cut(s) 76, 89
DrdI GACNNNNNNGTC 1 cut(s) 127
DseDI GACNNNNNNGTC 1 cut(s) 127
Eco47I GGWCC 1 cut(s) 284
EcoRI GAATTC 1 cut(s) 359
FaeI CATG 3 cut(s) 50, 69, 220
FaiI YATR 7 cut(s) 30, 38, 48, 59, 67, 102, 218
FaqI GGGAC 1 cut(s) 297
FatI CATG 3 cut(s) 46, 65, 216
FbaI TGATCA 1 cut(s) 76
FokI GGATG 1 cut(s) 307
FspBI CTAG 2 cut(s) 62, 71
Hin1II CATG 3 cut(s) 50, 69, 220
HincII GTYRAC 1 cut(s) 214
HindII GTYRAC 1 cut(s) 214
HindIII AAGCTT 1 cut(s) 12
HinfI GANTC 1 cut(s) 4
HphI GGTGA 2 cut(s) 167, 178
Hpy166II GTNNAC 2 cut(s) 8, 214
Hpy188III TCNNGA 1 cut(s) 196
Hpy8I GTNNAC 2 cut(s) 8, 214
HpyAV CCTTC 2 cut(s) 152, 268
HpyCH4V TGCA 2 cut(s) 125, 327
HpyF3I CTNAG 1 cut(s) 240
Hsp92II CATG 3 cut(s) 50, 69, 220
Ksp22I TGATCA 1 cut(s) 76
Kzo9I GATC 2 cut(s) 76, 89
LmnI GCTCC 1 cut(s) 136
LpnPI CCDG 7 cut(s) 72, 159, 239, 248, 300, 337, 341
LweI GCATC 1 cut(s) 329
MaeI CTAG 2 cut(s) 62, 71
MaeIII GTNAC 1 cut(s) 258
MalI GATC 2 cut(s) 78, 91
MboI GATC 2 cut(s) 76, 89
MboII GAAGA 1 cut(s) 233
MluCI AATT 1 cut(s) 359
MlyI GAGTC 1 cut(s) 13
MnlI CCTC 4 cut(s) 162, 235, 302, 310
MseI TTAA 1 cut(s) 342
NdeII GATC 2 cut(s) 76, 89
NlaIII CATG 3 cut(s) 50, 69, 220
NlaIV GGNNCC 1 cut(s) 285
NspI RCATGY 1 cut(s) 50
PciI ACATGT 1 cut(s) 46
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
PscI ACATGT 1 cut(s) 46
PspN4I GGNNCC 1 cut(s) 285
PspPI GGNCC 1 cut(s) 284
SaqAI TTAA 1 cut(s) 342
Sau3AI GATC 2 cut(s) 76, 89
Sau96I GGNCC 1 cut(s) 284
SchI GAGTC 1 cut(s) 13
SetI ASST 5 cut(s) 16, 110, 185, 246, 313
SfaNI GCATC 1 cut(s) 329
SinI GGWCC 1 cut(s) 284
SmlI CTYRAG 1 cut(s) 365
SmoI CTYRAG 1 cut(s) 365
Sse9I AATT 1 cut(s) 359
SspMI CTAG 2 cut(s) 62, 71
TasI AATT 1 cut(s) 359
Tru1I TTAA 1 cut(s) 342
Tru9I TTAA 1 cut(s) 342
TscAI CASTG 1 cut(s) 99
TspDTI ATGAA 1 cut(s) 46
TspRI CASTG 1 cut(s) 99
VpaK11BI GGWCC 1 cut(s) 284
XapI RAATTY 1 cut(s) 359
XceI RCATGY 1 cut(s) 50
XspI CTAG 2 cut(s) 62, 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.