Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001190

Physical Location & Seq

Genomic Coordinates Forward (+)

46407122 .. 46409178

Gene Structure 2057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G569200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 780 bp

ATGGGGAGGCGGAAGAGGGAGGAGATGTCGCAGTCGCAGTTACAGAATTGCTCAAGCAGGACGGTGAAGCCGAAGTTGGAAGAGAAATCGACGACAACAATGGAGAAAACAGAAGATGATGTCACACTCACACATAATAATGCGAATGATAAGGTCCGGGCAATTTTTGTTGTAGAAAATGCTTCTCTGACAAAGGGCTTCGTTCGAAAGCGGTGGAAGATTCTGGATTCAGAAGAAGACGCTGATTTCCTGCTCAAGCAAAAGAAGGATCTAAATGATTTTAGGCCTGGAAGGGTTTACGAGGCTCTTCGTGCGATTTTGGATAGCAAACTTAATAAAGCCGGTATGGTAGGAGCTGTGTATGTGAAAACTGATCAAGGAGTTTTATTTGAAATTAAACCCCATGTTCGTATACCAAGAACGTGCAAGCGCTTTTGTGGAGTCATCTTGGAGTTACTAGGGCATAAATGCATTCGTGATAAAGATACAAATGAAATTCTTATGCGTGTCGTTGAGGAACCTGTAACGCGACATTTACCTGTCAACTCTCGCGTCGTAGGTCTCTCTTATAGTTCAGAAAAGTTGGTTGACATTGATGAATATGTTAATTCTGGCAGTGATGAATTAAATCTTGTTTTTGTGGTGGGTGCAATGGTCCATGGGAAAATCAGTAAGGAGTATACAGATGATTTCATATCAGTTTCGAATTATCCATTGAGTGCTCAATACTGCATAGGGTTGATTTGCGAGTCATTGGAGCATAAATGGAAAATCTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

EMG1

Protein Analysis

260

Amino Acids

29.6

Weight (kDa)

8.42

Isoelectric Point (pI)

39.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001190)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57000
fragaria_vesca	FvH4_7g03130 FvH4_7g03130
malus_domestica	MD02G1295000.v1.1 MD03G1003900.v1.1 MD07G1030500.v1.1 MD14G1085000.v1.1
prunus_persica	Prupe.1G569200_v2.0.a1 Prupe.7G040700_v2.0.a1 Prupe.7G040700_v2.0.a1
pyrus_communis	pycom02g24800 pycom03g00390 pycom07g02220 pycom11g00350 pycom12g07800 pycom14g07450
rosa_chinensis	RchiOBHm_Chr1g0317791 RchiOBHm_Chr1g0324931 RchiOBHm_Chr2g0125441 RchiOBHm_Chr4g0421871
rosa_laevigata	RLG00000030168
rosa_multiflora	Rmu_co8495253.1_g000001 Rmu_sc0002447.1_g000012 Rmu_sc0004462.1_g000004 Rmu_sc0010303.1_g000001 Rmu_ssc0000240.1_g000047
rosa_roxburghii	Rroxscaffold_159G00433100 Rroxscaffold_1G00009460 Rroxscaffold_2G00079570 Rroxscaffold_2G00079580 Rroxscaffold_2G00127840 Rroxscaffold_3G00221990 Rroxscaffold_4G00325090 Rroxscaffold_4G00328380 Rroxscaffold_5G00346870
rosa_rugosa	Rorug01G0048600 Rorug01G0048700 Rorug01G0048800 Rorug03G0242300 Rorug05G0231300
rosa_samantha	Rh1AG029400 Rh1AG065000 Rh1AG260200 Rh1AG268400 Rh1BG053700 Rh1CG066400 Rh1DG071000 Rh2BG323900 Rh2DG580800 Rh5DG407100 Rh5DG421200
rosa_wichuraiana	Rw1G005440 Rw1G014820 Rw4G005800 Rw5G023610 Rw6G020160 Rw7G010520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	412, 680
AccII	CGCG	2 cut(s)	529, 552
AciI	CCGC	2 cut(s)	10, 211
AclWI	GGATC	1 cut(s)	276
AcsI	RAATTY	1 cut(s)	495
AfeI	AGCGCT	1 cut(s)	431
AgsI	TTSAA	1 cut(s)	392
AjnI	CCWGG	1 cut(s)	286
AjuI	GAANNNNNNNTTGG	2 cut(s)	59, 91
AluBI	AGCT	1 cut(s)	356
AluI	AGCT	1 cut(s)	356
Alw21I	GWGCWC	1 cut(s)	724
Alw26I	GTCTC	1 cut(s)	566
AlwI	GGATC	1 cut(s)	276
Aor51HI	AGCGCT	1 cut(s)	431
AoxI	GGCC	1 cut(s)	284
ApoI	RAATTY	1 cut(s)	495
Asp700I	GAANNNNTTC	1 cut(s)	773
AspLEI	GCGC	1 cut(s)	432
AspS9I	GGNCC	2 cut(s)	154, 655
AsuC2I	CCSGG	1 cut(s)	158
AsuHPI	GGTGA	1 cut(s)	76
AsuII	TTCGAA	2 cut(s)	205, 704
AvaII	GGWCC	2 cut(s)	154, 655
BbsI	GAAGAC	1 cut(s)	243
Bbv12I	GWGCWC	1 cut(s)	724
BciT130I	CCWGG	1 cut(s)	288
BclI	TGATCA	1 cut(s)	373
BcnI	CCSGG	1 cut(s)	158
BcoDI	GTCTC	1 cut(s)	566
BfaI	CTAG	1 cut(s)	458
BfoI	RGCGCY	1 cut(s)	433
Bme1390I	CCNGG	2 cut(s)	158, 288
Bme18I	GGWCC	2 cut(s)	154, 655
BmgT120I	GGNCC	2 cut(s)	154, 655
BmiI	GGNNCC	1 cut(s)	519
BmrFI	CCNGG	2 cut(s)	158, 288
BpiI	GAAGAC	1 cut(s)	243
Bpu14I	TTCGAA	2 cut(s)	205, 704
BpuEI	CTTGAG	2 cut(s)	37, 239
BpuMI	CCSGG	1 cut(s)	158
BsaI	GGTCTC	1 cut(s)	566
BsaJI	CCNNGG	1 cut(s)	658
BsaXI	ACNNNNNCTCC	2 cut(s)	11, 41
Bse118I	RCCGGY	1 cut(s)	341
Bse3DI	GCAATG	1 cut(s)	657
BseBI	CCWGG	1 cut(s)	288
BseDI	CCNNGG	1 cut(s)	658
BseMI	GCAATG	1 cut(s)	657
BseRI	GAGGAG	1 cut(s)	35
Bsh1236I	CGCG	2 cut(s)	529, 552
BshFI	GGCC	1 cut(s)	286
BsiHKAI	GWGCWC	1 cut(s)	724
BsiSI	CCGG	2 cut(s)	157, 342
BsmAI	GTCTC	1 cut(s)	566
BsmI	GAATGC	1 cut(s)	471
BsnI	GGCC	1 cut(s)	286
Bso31I	GGTCTC	1 cut(s)	566
Bsp119I	TTCGAA	2 cut(s)	205, 704
Bsp1286I	GDGCHC	1 cut(s)	724
Bsp143I	GATC	2 cut(s)	268, 373
Bsp19I	CCATGG	1 cut(s)	658
BspACI	CCGC	2 cut(s)	10, 211
BspANI	GGCC	1 cut(s)	286
BspFNI	CGCG	2 cut(s)	529, 552
BspLI	GGNNCC	1 cut(s)	519
BspPI	GGATC	1 cut(s)	276
BspQI	GCTCTTC	1 cut(s)	312
BspT104I	TTCGAA	2 cut(s)	205, 704
BspTNI	GGTCTC	1 cut(s)	566
BsrDI	GCAATG	1 cut(s)	657
BsrFI	RCCGGY	1 cut(s)	341
BssAI	RCCGGY	1 cut(s)	341
BssECI	CCNNGG	1 cut(s)	658
BssMI	GATC	2 cut(s)	268, 373
BssNAI	GTATAC	2 cut(s)	413, 681
BssT1I	CCWWGG	1 cut(s)	658
Bst1107I	GTATAC	2 cut(s)	413, 681
Bst2UI	CCWGG	1 cut(s)	288
Bst4CI	ACNGT	1 cut(s)	64
Bst6I	CTCTTC	3 cut(s)	8, 75, 312
BstBI	TTCGAA	2 cut(s)	205, 704
BstC8I	GCNNGC	1 cut(s)	428
BstDSI	CCRYGG	1 cut(s)	658
BstFNI	CGCG	2 cut(s)	529, 552
BstH2I	RGCGCY	1 cut(s)	433
BstHHI	GCGC	1 cut(s)	432
BstKTI	GATC	2 cut(s)	271, 376
BstMAI	GTCTC	1 cut(s)	566
BstMBI	GATC	2 cut(s)	268, 373
BstMWI	GCNNNNNNNGC	1 cut(s)	311
BstNI	CCWGG	1 cut(s)	288
BstSCI	CCNGG	2 cut(s)	156, 286
BstUI	CGCG	2 cut(s)	529, 552
BstV2I	GAAGAC	1 cut(s)	243
BstX2I	RGATCY	1 cut(s)	268
BstYI	RGATCY	1 cut(s)	268
BstZ17I	GTATAC	2 cut(s)	413, 681
BsuRI	GGCC	1 cut(s)	286
BtgI	CCRYGG	1 cut(s)	658
BtsI	GCAGTG	1 cut(s)	622
BtsIMutI	CAGTG	1 cut(s)	622
Cac8I	GCNNGC	1 cut(s)	428
CfoI	GCGC	1 cut(s)	432
Cfr10I	RCCGGY	1 cut(s)	341
Cfr13I	GGNCC	2 cut(s)	154, 655
CseI	GACGC	2 cut(s)	248, 541
CviAII	CATG	2 cut(s)	404, 659
CviJI	RGCY	6 cut(s)	70, 198, 286, 305, 341, 356
CviKI_1	RGCY	6 cut(s)	70, 198, 286, 305, 341, 356
DpnI	GATC	2 cut(s)	270, 375
DpnII	GATC	2 cut(s)	268, 373
Eam1104I	CTCTTC	3 cut(s)	8, 75, 312
EarI	CTCTTC	3 cut(s)	8, 75, 312
EciI	GGCGGA	1 cut(s)	25
Eco130I	CCWWGG	1 cut(s)	658
Eco147I	AGGCCT	1 cut(s)	286
Eco31I	GGTCTC	1 cut(s)	566
Eco47I	GGWCC	2 cut(s)	154, 655
Eco47III	AGCGCT	1 cut(s)	431
EcoRII	CCWGG	1 cut(s)	286
EcoT14I	CCWWGG	1 cut(s)	658
EcoT22I	ATGCAT	1 cut(s)	473
ErhI	CCWWGG	1 cut(s)	658
FaeI	CATG	2 cut(s)	407, 662
FatI	CATG	2 cut(s)	403, 658
FbaI	TGATCA	1 cut(s)	373
FblI	GTMKAC	2 cut(s)	412, 680
FspBI	CTAG	1 cut(s)	458
GlaI	GCGC	1 cut(s)	431
HaeII	RGCGCY	1 cut(s)	433
HaeIII	GGCC	1 cut(s)	286
HapII	CCGG	2 cut(s)	157, 342
HgaI	GACGC	2 cut(s)	248, 541
HhaI	GCGC	1 cut(s)	432
Hin1II	CATG	2 cut(s)	407, 662
Hin6I	GCGC	1 cut(s)	430
HinP1I	GCGC	1 cut(s)	430
HincII	GTYRAC	2 cut(s)	544, 589
HindII	GTYRAC	2 cut(s)	544, 589
HinfI	GANTC	4 cut(s)	220, 227, 441, 749
HpaII	CCGG	2 cut(s)	157, 342
HphI	GGTGA	1 cut(s)	76
Hpy166II	GTNNAC	5 cut(s)	298, 413, 544, 589, 681
Hpy188I	TCNGA	4 cut(s)	189, 232, 577, 779
Hpy188III	TCNNGA	2 cut(s)	224, 476
Hpy8I	GTNNAC	5 cut(s)	298, 413, 544, 589, 681
Hpy99I	CGWCG	2 cut(s)	94, 557
HpyAV	CCTTC	2 cut(s)	259, 285
HpyCH4III	ACNGT	1 cut(s)	64
HpyCH4IV	ACGT	1 cut(s)	422
HpyCH4V	TGCA	4 cut(s)	426, 471, 650, 732
HpyF10VI	GCNNNNNNNGC	1 cut(s)	311
HpySE526I	ACGT	1 cut(s)	422
Hsp92II	CATG	2 cut(s)	407, 662
HspAI	GCGC	1 cut(s)	430
Ksp22I	TGATCA	1 cut(s)	373
Kzo9I	GATC	2 cut(s)	268, 373
LguI	GCTCTTC	1 cut(s)	312
LmnI	GCTCC	2 cut(s)	353, 757
MaeI	CTAG	1 cut(s)	458
MaeII	ACGT	1 cut(s)	422
MaeIII	GTNAC	4 cut(s)	39, 121, 453, 523
MalI	GATC	2 cut(s)	270, 375
MboI	GATC	2 cut(s)	268, 373
MboII	GAAGA	8 cut(s)	25, 92, 125, 229, 245, 248, 299, 766
MflI	RGATCY	1 cut(s)	268
MhlI	GDGCHC	1 cut(s)	724
MluCI	AATT	7 cut(s)	46, 162, 393, 495, 607, 623, 706
MlyI	GAGTC	2 cut(s)	450, 758
MmeI	TCCRAC	1 cut(s)	57
MnlI	CCTC	4 cut(s)	9, 13, 295, 508
Mph1103I	ATGCAT	1 cut(s)	473
MroXI	GAANNNNTTC	1 cut(s)	773
MseI	TTAA	4 cut(s)	333, 396, 606, 626
MslI	CAYNNNNRTG	1 cut(s)	138
MspI	CCGG	2 cut(s)	157, 342
MspR9I	CCNGG	2 cut(s)	158, 288
Mva1269I	GAATGC	1 cut(s)	471
MvaI	CCWGG	1 cut(s)	288
MvnI	CGCG	2 cut(s)	529, 552
MwoI	GCNNNNNNNGC	1 cut(s)	311
NciI	CCSGG	1 cut(s)	158
NcoI	CCATGG	1 cut(s)	658
NdeII	GATC	2 cut(s)	268, 373
NlaIII	CATG	2 cut(s)	407, 662
NlaIV	GGNNCC	1 cut(s)	519
NmuCI	GTSAC	1 cut(s)	121
NsiI	ATGCAT	1 cut(s)	473
NspV	TTCGAA	2 cut(s)	205, 704
PceI	AGGCCT	1 cut(s)	286
PciSI	GCTCTTC	1 cut(s)	312
PcsI	WCGNNNNNNNCGW	1 cut(s)	68
PctI	GAATGC	1 cut(s)	471
PdmI	GAANNNNTTC	1 cut(s)	773
PfeI	GAWTC	2 cut(s)	220, 227
PleI	GAGTC	2 cut(s)	449, 757
PpsI	GAGTC	2 cut(s)	449, 757
Psp6I	CCWGG	1 cut(s)	286
PspGI	CCWGG	1 cut(s)	286
PspN4I	GGNNCC	1 cut(s)	519
PspPI	GGNCC	2 cut(s)	154, 655
PsuI	RGATCY	1 cut(s)	268
RseI	CAYNNNNRTG	1 cut(s)	138
SapI	GCTCTTC	1 cut(s)	312
SaqAI	TTAA	4 cut(s)	333, 396, 606, 626
Sau3AI	GATC	2 cut(s)	268, 373
Sau96I	GGNCC	2 cut(s)	154, 655
SchI	GAGTC	2 cut(s)	450, 758
ScrFI	CCNGG	2 cut(s)	158, 288
SduI	GDGCHC	1 cut(s)	724
SetI	ASST	6 cut(s)	156, 358, 425, 523, 541, 562
SfuI	TTCGAA	2 cut(s)	205, 704
SinI	GGWCC	2 cut(s)	154, 655
SmiMI	CAYNNNNRTG	1 cut(s)	138
SmlI	CTYRAG	2 cut(s)	52, 254
SmoI	CTYRAG	2 cut(s)	52, 254
Sse9I	AATT	7 cut(s)	46, 162, 393, 495, 607, 623, 706
SseBI	AGGCCT	1 cut(s)	286
SsiI	CCGC	2 cut(s)	10, 211
SspMI	CTAG	1 cut(s)	458
StuI	AGGCCT	1 cut(s)	286
StyD4I	CCNGG	2 cut(s)	156, 286
StyI	CCWWGG	1 cut(s)	658
TaaI	ACNGT	1 cut(s)	64
TaiI	ACGT	1 cut(s)	425
TaqI	TCGA	3 cut(s)	89, 205, 704
TasI	AATT	7 cut(s)	46, 162, 393, 495, 607, 623, 706
TfiI	GAWTC	2 cut(s)	220, 227
Tru1I	TTAA	4 cut(s)	333, 396, 606, 626
Tru9I	TTAA	4 cut(s)	333, 396, 606, 626
TscAI	CASTG	1 cut(s)	622
TseFI	GTSAC	1 cut(s)	121
Tsp45I	GTSAC	1 cut(s)	121
TspDTI	ATGAA	4 cut(s)	507, 612, 636, 682
TspRI	CASTG	1 cut(s)	622
VpaK11BI	GGWCC	2 cut(s)	154, 655
XapI	RAATTY	1 cut(s)	495
XmiI	GTMKAC	2 cut(s)	412, 680
XmnI	GAANNNNTTC	1 cut(s)	773
XspI	CTAG	1 cut(s)	458
Zsp2I	ATGCAT	1 cut(s)	473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.