Rh1AG029400

Exosome complex component

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
5327341 .. 5328419
1079 bp
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UTR
Exon/CDS
Intron
Rh1AG029400.1

Sequence Viewer

Length: 336 bp
ATGGCGCAGATGGGAAAGAGCGAGCTAGCTTCAGCCAAAAAACCCAAGGGAGCTGCAGGAAATACAGGTTTGGTTAGTGGCAAGGCTGGGGAGAGTGGAAAAGCAACTTCTGGTTCTGGAATGATGGAGTTTCACAAAGTGGCATTTTGTGATCTGCAGGCTCTCCACATGGTTTTAGATAGCCCGATTAATAAAGCTGGGAAGTTGCAATGTGTGTATATGAAGACCAAGGATGGTGATCTTCCTGTAGTAATATCATGTGCTAGTCTAGCCCTAGCAGATGCAGGGATAATGATGTATGACCTTGTTGCCTCAATCTCTGTGGTATTCATCTAG

Protein Analysis

111

Amino Acids

11.41

Weight (kDa)

8.46

Isoelectric Point (pI)

32.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 15
AdeI CACNNNGTG 1 cut(s) 139
AluBI AGCT 4 cut(s) 25, 29, 53, 197
AluI AGCT 4 cut(s) 25, 29, 53, 197
ApeKI GCWGC 1 cut(s) 53
AseI ATTAAT 1 cut(s) 189
AspLEI GCGC 1 cut(s) 7
AsuHPI GGTGA 1 cut(s) 248
AsuNHI GCTAGC 1 cut(s) 25
BbsI GAAGAC 1 cut(s) 230
BbvI GCAGC 1 cut(s) 40
BccI CCATC 3 cut(s) 4, 118, 227
BfaI CTAG 5 cut(s) 26, 264, 269, 275, 334
BfmI CTRYAG 3 cut(s) 54, 155, 246
BisI GCNGC 1 cut(s) 54
BlsI GCNGC 1 cut(s) 55
BmsI GCATC 1 cut(s) 271
BmtI GCTAGC 1 cut(s) 29
BpiI GAAGAC 1 cut(s) 230
BsaBI GATNNNNATC 1 cut(s) 237
BsaJI CCNNGG 2 cut(s) 45, 228
Bse3DI GCAATG 1 cut(s) 215
Bse8I GATNNNNATC 1 cut(s) 237
BseDI CCNNGG 2 cut(s) 45, 228
BseGI GGATG 1 cut(s) 238
BseJI GATNNNNATC 1 cut(s) 237
BseMI GCAATG 1 cut(s) 215
BseXI GCAGC 1 cut(s) 40
BseYI CCCAGC 2 cut(s) 86, 197
Bsp143I GATC 2 cut(s) 151, 238
BspMAI CTGCAG 2 cut(s) 58, 159
BspOI GCTAGC 1 cut(s) 29
BsrDI GCAATG 1 cut(s) 215
BssECI CCNNGG 2 cut(s) 45, 228
BssMI GATC 2 cut(s) 151, 238
BssT1I CCWWGG 2 cut(s) 45, 228
BstC8I GCNNGC 3 cut(s) 23, 27, 159
BstF5I GGATG 1 cut(s) 238
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 2 cut(s) 154, 241
BstMBI GATC 2 cut(s) 151, 238
BstMWI GCNNNNNNNGC 1 cut(s) 269
BstSFI CTRYAG 3 cut(s) 54, 155, 246
BstV1I GCAGC 1 cut(s) 40
BstV2I GAAGAC 1 cut(s) 230
BtsCI GGATG 1 cut(s) 238
Cac8I GCNNGC 3 cut(s) 23, 27, 159
CfoI GCGC 1 cut(s) 7
CspCI CAANNNNNGTGG 1 cut(s) 303
CviAII CATG 2 cut(s) 169, 258
CviJI RGCY 9 cut(s) 25, 29, 35, 53, 86, 161, 183, 197, 272
CviKI_1 RGCY 9 cut(s) 25, 29, 35, 53, 86, 161, 183, 197, 272
DpnI GATC 2 cut(s) 153, 240
DpnII GATC 2 cut(s) 151, 238
DraIII CACNNNGTG 1 cut(s) 139
Eco130I CCWWGG 2 cut(s) 45, 228
Eco57I CTGAAG 1 cut(s) 15
EcoT14I CCWWGG 2 cut(s) 45, 228
ErhI CCWWGG 2 cut(s) 45, 228
FaeI CATG 2 cut(s) 172, 261
FaiI YATR 5 cut(s) 170, 219, 221, 259, 300
FatI CATG 2 cut(s) 168, 257
Fnu4HI GCNGC 1 cut(s) 54
FokI GGATG 1 cut(s) 245
Fsp4HI GCNGC 1 cut(s) 54
FspBI CTAG 5 cut(s) 26, 264, 269, 275, 334
GlaI GCGC 1 cut(s) 6
GluI GCNGC 1 cut(s) 54
GsaI CCCAGC 2 cut(s) 90, 201
HhaI GCGC 1 cut(s) 7
Hin1II CATG 2 cut(s) 172, 261
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HphI GGTGA 1 cut(s) 248
Hpy188III TCNNGA 1 cut(s) 117
HpyCH4V TGCA 4 cut(s) 56, 157, 208, 284
HpyF10VI GCNNNNNNNGC 1 cut(s) 269
Hsp92II CATG 2 cut(s) 172, 261
HspAI GCGC 1 cut(s) 5
Kzo9I GATC 2 cut(s) 151, 238
LmnI GCTCC 1 cut(s) 50
LpnPI CCDG 9 cut(s) 42, 51, 72, 96, 102, 143, 183, 258, 270
Lsp1109I GCAGC 1 cut(s) 40
LweI GCATC 1 cut(s) 271
MaeI CTAG 5 cut(s) 26, 264, 269, 275, 334
MalI GATC 2 cut(s) 153, 240
MboI GATC 2 cut(s) 151, 238
MboII GAAGA 2 cut(s) 233, 235
MnlI CCTC 1 cut(s) 322
MseI TTAA 1 cut(s) 189
MwoI GCNNNNNNNGC 1 cut(s) 269
NdeII GATC 2 cut(s) 151, 238
NheI GCTAGC 1 cut(s) 25
NlaIII CATG 2 cut(s) 172, 261
PkrI GCNGC 1 cut(s) 55
PshBI ATTAAT 1 cut(s) 189
PspFI CCCAGC 2 cut(s) 86, 197
PstI CTGCAG 2 cut(s) 58, 159
SaqAI TTAA 1 cut(s) 189
SatI GCNGC 1 cut(s) 54
Sau3AI GATC 2 cut(s) 151, 238
SetI ASST 6 cut(s) 27, 31, 55, 70, 199, 306
SfaNI GCATC 1 cut(s) 271
SfcI CTRYAG 3 cut(s) 54, 155, 246
SspMI CTAG 5 cut(s) 26, 264, 269, 275, 334
StyI CCWWGG 2 cut(s) 45, 228
Tru1I TTAA 1 cut(s) 189
Tru9I TTAA 1 cut(s) 189
TseI GCWGC 1 cut(s) 53
TspDTI ATGAA 2 cut(s) 236, 319
VspI ATTAAT 1 cut(s) 189
XspI CTAG 5 cut(s) 26, 264, 269, 275, 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.