Ribosomal RNA small subunit methyltransferase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| EMG1 | PF03587 | 2 - 55 | 8.1e-17 | EMG1/NEP1 methyltransferase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 1 cut(s) | 85 |
| AluI | AGCT | 1 cut(s) | 85 |
| ApeKI | GCWGC | 4 cut(s) | 79, 82, 85, 110 |
| AsuII | TTCGAA | 1 cut(s) | 40 |
| BbvI | GCAGC | 4 cut(s) | 66, 72, 94, 97 |
| BclI | TGATCA | 1 cut(s) | 141 |
| BfmI | CTRYAG | 1 cut(s) | 80 |
| BisI | GCNGC | 4 cut(s) | 80, 83, 86, 111 |
| BlsI | GCNGC | 4 cut(s) | 81, 84, 87, 112 |
| BmrI | ACTGGG | 1 cut(s) | 154 |
| BmuI | ACTGGG | 1 cut(s) | 154 |
| Bpu14I | TTCGAA | 1 cut(s) | 40 |
| BpuEI | CTTGAG | 1 cut(s) | 31 |
| Bse1I | ACTGG | 1 cut(s) | 160 |
| BseGI | GGATG | 1 cut(s) | 13 |
| BseMII | CTCAG | 1 cut(s) | 89 |
| BseNI | ACTGG | 1 cut(s) | 160 |
| BseXI | GCAGC | 4 cut(s) | 66, 72, 94, 97 |
| Bsp119I | TTCGAA | 1 cut(s) | 40 |
| Bsp143I | GATC | 1 cut(s) | 141 |
| BspCNI | CTCAG | 1 cut(s) | 90 |
| BspMAI | CTGCAG | 1 cut(s) | 84 |
| BspT104I | TTCGAA | 1 cut(s) | 40 |
| BsrI | ACTGG | 1 cut(s) | 160 |
| BssMI | GATC | 1 cut(s) | 141 |
| BstBI | TTCGAA | 1 cut(s) | 40 |
| BstDEI | CTNAG | 1 cut(s) | 98 |
| BstF5I | GGATG | 1 cut(s) | 13 |
| BstKTI | GATC | 1 cut(s) | 144 |
| BstMBI | GATC | 1 cut(s) | 141 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 85 |
| BstSFI | CTRYAG | 1 cut(s) | 80 |
| BstV1I | GCAGC | 4 cut(s) | 66, 72, 94, 97 |
| BtsCI | GGATG | 1 cut(s) | 13 |
| CviAII | CATG | 1 cut(s) | 76 |
| CviJI | RGCY | 2 cut(s) | 31, 85 |
| CviKI_1 | RGCY | 2 cut(s) | 31, 85 |
| DdeI | CTNAG | 1 cut(s) | 98 |
| DpnI | GATC | 1 cut(s) | 143 |
| DpnII | GATC | 1 cut(s) | 141 |
| FaeI | CATG | 1 cut(s) | 79 |
| FaiI | YATR | 6 cut(s) | 34, 36, 77, 104, 134, 140 |
| FatI | CATG | 1 cut(s) | 75 |
| FauNDI | CATATG | 1 cut(s) | 34 |
| FbaI | TGATCA | 1 cut(s) | 141 |
| Fnu4HI | GCNGC | 4 cut(s) | 80, 83, 86, 111 |
| FokI | GGATG | 1 cut(s) | 20 |
| Fsp4HI | GCNGC | 4 cut(s) | 80, 83, 86, 111 |
| FspEI | CC | 5 cut(s) | 34, 45, 54, 99, 164 |
| GluI | GCNGC | 4 cut(s) | 80, 83, 86, 111 |
| Hin1II | CATG | 1 cut(s) | 79 |
| HinfI | GANTC | 1 cut(s) | 42 |
| Hpy188III | TCNNGA | 1 cut(s) | 145 |
| HpyCH4V | TGCA | 1 cut(s) | 82 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 85 |
| HpyF3I | CTNAG | 1 cut(s) | 98 |
| Hsp92II | CATG | 1 cut(s) | 79 |
| Ksp22I | TGATCA | 1 cut(s) | 141 |
| Kzo9I | GATC | 1 cut(s) | 141 |
| LpnPI | CCDG | 2 cut(s) | 54, 99 |
| Lsp1109I | GCAGC | 4 cut(s) | 66, 72, 94, 97 |
| MaeIII | GTNAC | 1 cut(s) | 154 |
| MalI | GATC | 1 cut(s) | 143 |
| MboI | GATC | 1 cut(s) | 141 |
| MseI | TTAA | 2 cut(s) | 27, 57 |
| MspA1I | CMGCKG | 1 cut(s) | 85 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 85 |
| NdeI | CATATG | 1 cut(s) | 34 |
| NdeII | GATC | 1 cut(s) | 141 |
| NlaIII | CATG | 1 cut(s) | 79 |
| NmuCI | GTSAC | 1 cut(s) | 154 |
| NspV | TTCGAA | 1 cut(s) | 40 |
| PfeI | GAWTC | 1 cut(s) | 42 |
| PkrI | GCNGC | 4 cut(s) | 81, 84, 87, 112 |
| PstI | CTGCAG | 1 cut(s) | 84 |
| PvuII | CAGCTG | 1 cut(s) | 85 |
| SaqAI | TTAA | 2 cut(s) | 27, 57 |
| SatI | GCNGC | 4 cut(s) | 80, 83, 86, 111 |
| Sau3AI | GATC | 1 cut(s) | 141 |
| SetI | ASST | 1 cut(s) | 87 |
| SfcI | CTRYAG | 1 cut(s) | 80 |
| SfuI | TTCGAA | 1 cut(s) | 40 |
| SgeI | CNNG | 7 cut(s) | 60, 81, 88, 126, 134, 157, 164 |
| SmlI | CTYRAG | 1 cut(s) | 46 |
| SmoI | CTYRAG | 1 cut(s) | 46 |
| TaqI | TCGA | 1 cut(s) | 40 |
| TfiI | GAWTC | 1 cut(s) | 42 |
| Tru1I | TTAA | 2 cut(s) | 27, 57 |
| Tru9I | TTAA | 2 cut(s) | 27, 57 |
| TseFI | GTSAC | 1 cut(s) | 154 |
| TseI | GCWGC | 4 cut(s) | 79, 82, 85, 110 |
| Tsp45I | GTSAC | 1 cut(s) | 154 |