Prupe.2G309900_v2.0.a1
ERF Family

A domain family that is part of the cupin metalloenzyme superfamily.

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
29344526 .. 29353104
8579 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G309900.2

Sequence Viewer

Length: 5313 bp
ATGGAGAAGGTTGCTGAAGAGACGCAGAGGAAGAGGAAAGTTCCTGAGGAGGTGGGCAATGGCGAAAATGGTGGTGGAGCTGAAGAGGATCAACAGAGGCAAAAAAGAAGTAGGCAAAAAAGTGACGGAATTCTGGGAAATGGGGATCAGGACACTGCAGGTGAGCTGGTTGAAGGATGGTTTGGCGGTGGTCTGAGTGTTGGTGAAGAAATTGCTCGCCTTTTTGGTGAAGTGAGTGGTGGGAGTGTTGGCCTTGGTATTGATGGCATTGATGGTGAAGGTGTGAATTTCTGGGGTGGTGGAAATGGACAAGACACTGAGGTTGGTGGGTTTGATGTAGCTGCATGCAAATTTGGTGGTCAAGGTTTCGGTTTGGAAGAAATTCAAGATGGGTTCGGTGTAGCTGGTTCTGAAAATGGTGGTAGAATTTTGAGTTGTGACAATTTTGGATATGGGTTTGTTGAAAATAAGAACCCAGATGGAGGTTTGGGTCTTGATGGCAGAGGCATTCAGTTTTGGGGCAGTGAAAATTCTTGTGGACTTGGTGGTGGGATGCTGGATGGTGAGGGAAACCAAGTTGTTGGGTCTTCTGATCTATATGCTTGTAAAAATGCCGGTGAAGGAATTCAAGGCCTATTTGGTGGCGACAGAGGTGGACTTGGAGGTCTTTTAAGAGGTGAGAGTGATCAGTTTTGTGGTGGTAAAGCCGTTTCTGCAAATGTTGATGATAAAAGAGTTCAAGGCTGTTTAAGTGAAAATGCATCTGGAAATAAAGGTAAAATTTTGGAGAGTCAGGACGAATATGGTGAAGGTAGACGTGGAGATGATGCTAGAGAAGAGGTGGCCCGGTCAAAAGGTAAGCGTGGGAGGCCAAAAGGATCAAAGAACAAGAAGAAGATTCTTGAGGCTGAAGAGGGCATTAAACAGTTGGGTGGAATTTCCAGAGACAATGTGGGCGGAGAAGAGATTGCGAGGCCGAAGAGTAAGCAAGGAAGGCCAAAGGGGTCCACGAACAAGAAAAAGAAGGATCTTGCAAATGATAAGAATGAGGATGTGCCTGTTGACAATGTGGATGGTGAAGACTCTGTGAGGCGAAAGAGTAAGCAAGGTCGACCAAAGGGTTCTAAAACTAAAAAGAAAGATGTTGTCAATGGTAAAAGTGATGCTGTGCCTGTTTTGGGTGAAAATACTAAGGATTTGGTTGCCGTAGCCACTCCTGGTAATGAAGTTGGGAATGTGATTGTTTTGCCAAAGACAAAGCTTGGTCGACCAAAGGGTTCGAAGACCAAGCGAAATCTTACAGGTGAGGAAAATCATGGCACGGCAGGATCAGGAGCTGTTGCTGTGGGCATTGACATATCAGTTCCGCCTATTGGTTTGGAGAAACGAATGATTGCTCTTATGGGTGAACAAAACAGGAAAATGGAAGTTAAAGCGTGCAGTGGTTATGAATTTGGAGATGAGATTGTGCAGTTGAAGGAAAAAGGTGGTTTGCCTACGAAGACAATTCCTGTAAATGATGGAAATAGTGCAATGTCAAGCGAAACTTCGGGCAGAAATTGCACTGGTAGATTGATGGCCTGTTTGACGGGTTTGGAAAAAGTGAGGCCAAATCTTGTAAGCAAGGGAGATAAGGGGCTGCCTGGTGAATCCACTTGTGGAAGTGAGTTTGTCCAGCCAAAGGTTAAGCGTGGCCGATTCAAGGATCCCAAGAAGAATAAGAAAAAGCTTGTAGAAACAGAAAATCAGGAAATTCCTGGGGACATCCTGGATGCTAATGATGGCACTGATAGAACACTTCTTGCGACAGGTTTGAAGAATGAGAGACCTGTCCTTACAGGTGAGAAAGATATGCAATCGAATAAGGAAGCTTTTGATAGCAATGAAGATGGATATGAGACTGCTCAGCCAAAGAGCAAGCGCGGTCGACCAAAGGGTTCAAAGACTAAGAAGAAGAAAGTTTCTGGTCAAGATAATCAGAGAAACCCCAGCAAATTTGTGAGTGGTAATGATGGTAAGGTTGAGGTGGTCTGTTCAACCGGGTTGGAGAATGAAATCTTTGTTGGAAAAGAAGTGGGGAGATTGCCAGGTCAAGCCACTTCCGAAAATGGAGGTGGAAATGAGTTTTTACAGCCAAGGGGTAGGCGCGGCCGACCGAAGGGTTCAAAGAGCAAGAAGAAAAATCTTTCCGGTGATGAAAAAAGGGAAGTGCCTACTGAAGTCATGGGTGGTATGAATGGCAGATATCAGACTGATTTGTGTACGAGTTTGGAAAATGGGGGGCCTATTCTTGTAGGTAAGGAAGCTGTTGAAATGAAAGTTGGAAATGAAATTGTCAAGGTGAAGAATAAGCGTGGTCGGCCAAAGGGTTCAAAGACTAGGAAGAAGAATATTTTAGGTAAGGAAATTCAAGGAATGCCTAGTGAAACAGTAGTTGGTGATCATGATGATGGTAAAGATACTTTTCTGATGAGTTTGGAGAATGAGATGACCATTCTTGTGGGTGAGGAAGATAAGAGAATGCCTGCTGAAGCATCTGGTTATAATGAAGGAGGAAATGAGGTTGCCCAACAAAACAGTAGACGTGGCCGACCTAAAGGTTCAAAAAACAATAAACTTAAGGCTACTGTTGGAGAATATCAAAGCCAGGAAGCAGAAAAGGTTGGAAAAATTAGTGGTGGGGATGAAAGTTCACAGAATAAGCGAGGCCGGCCTAAGGGTTCAAAGAACAAGAGAAGATTTTTGAGTAAGATTACAGTGCTGAAGCATCAAATGTCGGCATCTCTCTTAGAGGTAGAATATCAGAAAGAAACGGATTTGAAGGAGAAATTTCCTGTGAGGCAATCGAAGAACTCTGACGATACAGAGAGCAATAACCATAACAGGCCTAGAGGGAGACCTAGGAAGTTCAACAACCAACAACTGAATGCCAGTGACTTTCACAGAGGAAAATCTACTGATACATCTGATGATAACAGTAGGAAAAAGGAGAGTTTAATGTGCCACCAGTGCTTGAGGAATGACAGAAAAGGTGTTGTCATTTGTTTAAATTGCAGAAAGAAACGCTATTGCTATGATTGTGTTGCAAAGTGGTACCCAGACAAGACAAGAAAGGACATAGAAATTGCTTGTCCTTATTGTCGTGGTAACTGCAACTGCAGAATATGCCTCAAGGAGTATTTAGTTGTGATGGCTGGGAATGAAGGAACAGATGCAAATGTTAAGTTGCAAAAGTTGCTTTACTTGCTATGCAAGACGCTGCCTCTCCTTAGGCATATTCAACAGGAGCAGATGTCCGAGTTAGATGTGGAAGGCTGTTTACGAGGTATCCAATTGACAGAAGAGGATCTCACGAGATCTATACTAGAGGATGATGATCGAGTGTATTGTGACAATTGCAATACATCCATTGTCAATTTCCACAGAAGCTGCCCCAATCCTGATTGTTCTTATGATCTCTGTCTCACTTGTTGTTCGGAACTAAGGGAAGTATGCCAGCCTAGAGGTGGTGAAGCAGAATCTTCTCATCAGCAGTATTGCGAAAGAGCATATGGTCAAGGCCCAGTCTCAAATGGCAGCCATATTCCTGCAAATGGGAATAGATATGTATCCCAGAGCCAAATGGCCATACCAGTAAATAGGTGCACAAATCATATGTCATCCGACTTTCCTGATTGGATAGCAGAAGCTGATGGTAGGATTCCTTGTCCTCCAAAAGCACGAGGAGGTTGTGGTACCAAGTTACTTGAACTGAGACGAATCTTTGAAGCTAATTGGGTTGAAAAACTAATTTCGAGTTCTGAATACCTCACTATCAATTATCAGTCACCAGATATTGACTTTTCTCAAGAATGTTCTTTGTGCCATCCTATCAGTTCTGCTGGAAGTGGAGTAAAAGCTTCTGAAGTAAGGCAGGCAGCTTATAGGGAAAACTGTCATGATAACTCTCTCTACTGCCCAAATGCTGTTCATCTGGGAGACAATGATATTGAGCATTTCCAGTTACACTGGATGAGAGGTGAACCTGTTGTGGTAAGAAATGTACGTGAAAAGGCTTCTGGCCTTAGCTGGGAACCAATGGTCATGTGGAGGGCTTTTATTGGGGCAAAAAAAGTATTAAAAGAGGAGGCAGTCAGGGTTAAAGCCATTGATTGCCTGGATTGGTGTGAGGTTGAGATTAATATTTTTCAGTTCTTTAAGGGCTATATAGAGGGCCGTAGGTATAGTAATGGGTGGCCAGAGATGTTGAAGCTGAAGGATTGGCCTCCATCCAATTCCTTTGAAGAGTGTTTACCGAGGCACGGTGCTGAATTTATTGCCATGCTTCCGTTCAGTGACTATACCCATTCCAAATCAGGTGTACTAAATCTTGCTACAAAGCTTCCTATTGTTTTAAAGCCAGACTTGGGACCAAAGACATACATTGCTTATGGATCAATGGAGGAGCTTGGTAGAGGTGATTCAGTAACCAAACTGCATTGTGACATTTCTGATGCGGTTAATGTACTGACACACACAACCGAAGTAAAGATTCCTCCCGGACAGCGTAAAATCATCGACCAATTACAGAAGAAATATGGAGCTGAAAAGGAAATAATTGAAGAAAAATCATGTAATGAAGAATACTTTGAGCCTTCTAATGTGACAGAAGACATGAAGTTTGTCAATGAGGCAGATTTCTCACAGAAACTATTTTCAGGCAATGTTATTAACAACTTAGAGTCTCGGGAGTCTGATTCAAATTCAAGCACAAATGTTCAAAGTAATGATACTTCAGAGGTTGAATATGGAGGTGCTGTGTGGGACATTTTTCGTCGGCAAGATGTACCTAAGTTAATAGAATACCTACTGAAGCATCACAAAGAATTCCACCACATCAATAATGCCCCTGTGAATTCTGTTATTCATCCTATTCATGACCAGACGCTTTATCTAGATGAGAAGCATAAAAAGAAGTTGAAGGAAGAGTTTGATGTTGAGCCTTGGACATTTGAGCAACACCTTGGTGAGGCTGTTTTCATTCCTGCTGGATGCCCACATCAAGTGAGAAATAGGCAGTCATGCATTAAAGTGGCCCTTGACTTTGTTTCCCCCGAAAATGTTCAAGAATGCATTCGGTTAACAGAGGAGTTTCGCTTGCTTCCAGAAAACCATAGATCCAAGGAAGATAAATTGGAGGTGAAGAAGATGGCCCTATATGCAGCAAGTGATGCTATAAGTGAAGCCAAAAATCTGATGTCTGTAAATTCTTTAAACGGGCCCAGGAAGCTTAGGAGCAGCCGTTCCAATTCAAAGTGCCAATTGGAGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1771

Amino Acids

195.01

Weight (kDa)

8.12

Isoelectric Point (pI)

44.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2544
AarI CACCTGC 1 cut(s) 149
AasI GACNNNNNNGTC 1 cut(s) 663
Acc36I ACCTGC 1 cut(s) 149
Acc65I GGTACC 2 cut(s) 3093, 3734
AccB1I GGYRCC 2 cut(s) 3093, 3734
AccI GTMKAC 5 cut(s) 814, 1111, 1267, 1927, 2581
AccII CGCG 2 cut(s) 1923, 2148
AciI CCGC 6 cut(s) 186, 957, 1367, 1923, 2148, 4496
AcoI YGGCCR 6 cut(s) 1693, 2149, 2360, 2587, 3624, 4235
AfaI GTAC 7 cut(s) 2263, 3095, 3736, 4044, 4362, 4506, 4827
AflII CTTAAG 1 cut(s) 2618
AjiI CACGTC 2 cut(s) 818, 2585
AjnI CCWGG 8 cut(s) 1216, 1642, 1756, 1767, 2086, 2646, 4155, 5261
AjuI GAANNNNNNNTTGG 8 cut(s) 165, 197, 2046, 2078, 2304, 2336, 2418, 2450
AleI CACNNNNGTG 1 cut(s) 5004
AloI GAACNNNNNNTCC 2 cut(s) 5266, 5298
Alw21I GWGCWC 1 cut(s) 3647
Alw44I GTGCAC 1 cut(s) 3643
AlwNI CAGNNNCTG 3 cut(s) 1337, 3429, 3689
Ama87I CYCGRG 1 cut(s) 4725
ApaI GGGCCC 1 cut(s) 5262
ApaLI GTGCAC 1 cut(s) 3643
ApeKI GCWGC 8 cut(s) 341, 1639, 3259, 3429, 3576, 3917, 5201, 5277
ArsI GACNNNNNNTTYG 4 cut(s) 3641, 3673, 4643, 4675
AseI ATTAAT 1 cut(s) 4179
Asp700I GAANNNNTTC 4 cut(s) 381, 624, 5100, 5112
Asp718I GGTACC 2 cut(s) 3093, 3734
AspA2I CCTAGG 1 cut(s) 2900
AspLEI GCGC 2 cut(s) 1923, 2148
AsuC2I CCSGG 3 cut(s) 847, 2041, 4539
AsuII TTCGAA 1 cut(s) 1280
AvaI CYCGRG 1 cut(s) 4725
AvaII GGWCC 2 cut(s) 1005, 4409
AvrII CCTAGG 1 cut(s) 2900
AxyI CCTNAGG 3 cut(s) 45, 2715, 3269
BaeGI GKGCMC 2 cut(s) 3647, 5262
BalI TGGCCA 2 cut(s) 3626, 4237
BamHI GGATCC 1 cut(s) 1705
BanI GGYRCC 2 cut(s) 3093, 3734
BanII GRGCYC 1 cut(s) 5262
BarI GAAGNNNNNNTAC 6 cut(s) 3303, 3335, 4275, 4307, 4756, 4788
BauI CACGAG 2 cut(s) 3352, 3720
BbsI GAAGAC 5 cut(s) 579, 1086, 1289, 1508, 4656
Bbv12I GWGCWC 1 cut(s) 3647
BbvI GCAGC 8 cut(s) 328, 1626, 3246, 3416, 3588, 3929, 5213, 5289
BceAI ACGGC 5 cut(s) 692, 1190, 1338, 4200, 5265
BciT130I CCWGG 8 cut(s) 1218, 1644, 1758, 1769, 2088, 2648, 4157, 5263
BciVI GTATCC 2 cut(s) 3338, 3619
BclI TGATCA 2 cut(s) 685, 2440
BcnI CCSGG 3 cut(s) 847, 2041, 4539
BfaI CTAG 8 cut(s) 831, 2379, 2421, 2889, 2901, 3365, 3501, 4934
BfmI CTRYAG 2 cut(s) 156, 3157
BfrI CTTAAG 1 cut(s) 2618
BfuAI ACCTGC 1 cut(s) 149
BfuI GTATCC 2 cut(s) 3338, 3619
BglII AGATCT 1 cut(s) 3356
BisI GCNGC 9 cut(s) 342, 1640, 2149, 3260, 3430, 3577, 3918, 5202, 5278
BlnI CCTAGG 1 cut(s) 2900
BlpI GCTNAGC 1 cut(s) 1905
BlsI GCNGC 9 cut(s) 343, 1641, 2150, 3261, 3431, 3578, 3919, 5203, 5279
Bme18I GGWCC 2 cut(s) 1005, 4409
BmeT110I CYCGRG 1 cut(s) 4725
BmgBI CACGTC 2 cut(s) 818, 2585
BmiI GGNNCC 8 cut(s) 1006, 1707, 2283, 3095, 3736, 4074, 4410, 5260
BmrI ACTGGG 1 cut(s) 3557
BmuI ACTGGG 1 cut(s) 3557
BpiI GAAGAC 5 cut(s) 579, 1086, 1289, 1508, 4656
Bpu10I CCTNAGC 2 cut(s) 4064, 5270
Bpu1102I GCTNAGC 1 cut(s) 1905
Bpu14I TTCGAA 1 cut(s) 1280
BpuEI CTTGAG 4 cut(s) 923, 3034, 3155, 3831
BpuMI CCSGG 3 cut(s) 847, 2041, 4539
BsaAI YACGTR 1 cut(s) 4046
BsaBI GATNNNNATC 2 cut(s) 3375, 3607
BsaI GGTCTC 2 cut(s) 1819, 2890
BsaJI CCNNGG 9 cut(s) 253, 1757, 2135, 2900, 4295, 4982, 5002, 5160, 5261
BsaWI WCCGGW 1 cut(s) 2189
BsaXI ACNNNNNCTCC 6 cut(s) 3278, 3308, 4782, 4812, 5266, 5296
Bse118I RCCGGY 2 cut(s) 614, 2709
Bse1I ACTGG 7 cut(s) 1570, 2931, 3007, 3563, 3632, 4000, 4013
Bse21I CCTNAGG 3 cut(s) 45, 2715, 3269
Bse3DI GCAATG 5 cut(s) 64, 1539, 1888, 4422, 4708
Bse8I GATNNNNATC 2 cut(s) 3375, 3607
BseBI CCWGG 8 cut(s) 1218, 1644, 1758, 1769, 2088, 2648, 4157, 5263
BseDI CCNNGG 9 cut(s) 253, 1757, 2135, 2900, 4295, 4982, 5002, 5160, 5261
BseJI GATNNNNATC 2 cut(s) 3375, 3607
BseMI GCAATG 5 cut(s) 64, 1539, 1888, 4422, 4708
BseMII CTCAG 5 cut(s) 36, 185, 309, 1919, 3743
BseNI ACTGG 7 cut(s) 1570, 2931, 3007, 3563, 3632, 4000, 4013
BseRI GAGGAG 5 cut(s) 62, 3738, 4139, 4457, 5141
BseSI GKGCMC 2 cut(s) 3647, 5262
BseX3I CGGCCG 1 cut(s) 2149
BseXI GCAGC 8 cut(s) 328, 1626, 3246, 3416, 3588, 3929, 5213, 5289
BseYI CCCAGC 3 cut(s) 1988, 3194, 4068
BsgI GTGCAG 2 cut(s) 1459, 1490
Bsh1236I CGCG 2 cut(s) 1923, 2148
Bsh1285I CGRYCG 3 cut(s) 1927, 2152, 2156
BshNI GGYRCC 2 cut(s) 3093, 3734
BsiEI CGRYCG 3 cut(s) 1927, 2152, 2156
BsiHKAI GWGCWC 1 cut(s) 3647
BsiHKCI CYCGRG 1 cut(s) 4725
BsiSI CCGG 6 cut(s) 615, 847, 2040, 2190, 2710, 4539
BslFI GGGAC 3 cut(s) 1775, 4422, 4817
BsmBI CGTCTC 2 cut(s) 14, 3748
BsmFI GGGAC 3 cut(s) 1775, 4422, 4817
BsmI GAATGC 6 cut(s) 507, 2421, 2526, 2932, 5112, 5114
Bso31I GGTCTC 2 cut(s) 1819, 2890
BsoBI CYCGRG 1 cut(s) 4725
Bsp119I TTCGAA 1 cut(s) 1280
Bsp120I GGGCCC 1 cut(s) 5258
Bsp1286I GDGCHC 2 cut(s) 3647, 5262
Bsp1720I GCTNAGC 1 cut(s) 1905
BspACI CCGC 6 cut(s) 186, 957, 1367, 1923, 2148, 4496
BspCNI CTCAG 5 cut(s) 37, 186, 310, 1918, 3744
BspFNI CGCG 2 cut(s) 1923, 2148
BspHI TCATGA 3 cut(s) 2443, 3937, 4915
BspLI GGNNCC 8 cut(s) 1006, 1707, 2283, 3095, 3736, 4074, 4410, 5260
BspMAI CTGCAG 2 cut(s) 160, 3161
BspMI ACCTGC 1 cut(s) 149
BspT104I TTCGAA 1 cut(s) 1280
BspT107I GGYRCC 2 cut(s) 3093, 3734
BspTI CTTAAG 1 cut(s) 2618
BspTNI GGTCTC 2 cut(s) 1819, 2890
BsrDI GCAATG 5 cut(s) 64, 1539, 1888, 4422, 4708
BsrFI RCCGGY 2 cut(s) 614, 2709
BsrI ACTGG 7 cut(s) 1570, 2931, 3007, 3563, 3632, 4000, 4013
BssAI RCCGGY 2 cut(s) 614, 2709
BssECI CCNNGG 9 cut(s) 253, 1757, 2135, 2900, 4295, 4982, 5002, 5160, 5261
BssSI CACGAG 2 cut(s) 3352, 3720
BssT1I CCWWGG 6 cut(s) 253, 2135, 2900, 4982, 5002, 5160
Bst2BI CACGAG 2 cut(s) 3352, 3720
Bst2UI CCWGG 8 cut(s) 1218, 1644, 1758, 1769, 2088, 2648, 4157, 5263
Bst4CI ACNGT 8 cut(s) 927, 2431, 2579, 2629, 2758, 2978, 3935, 4304
BstAFI CTTAAG 1 cut(s) 2618
BstAPI GCANNNNNTGC 4 cut(s) 1560, 3165, 3235, 5210
BstBAI YACGTR 1 cut(s) 4046
BstBI TTCGAA 1 cut(s) 1280
BstC8I GCNNGC 9 cut(s) 217, 346, 1438, 1919, 2526, 2711, 3497, 3915, 5138
BstENI CCTNNNNNAGG 1 cut(s) 5006
BstFNI CGCG 2 cut(s) 1923, 2148
BstHHI GCGC 2 cut(s) 1923, 2148
BstMCI CGRYCG 3 cut(s) 1927, 2152, 2156
BstNI CCWGG 8 cut(s) 1218, 1644, 1758, 1769, 2088, 2648, 4157, 5263
BstNSI RCATGY 1 cut(s) 348
BstSFI CTRYAG 2 cut(s) 156, 3157
BstSLI GKGCMC 2 cut(s) 3647, 5262
BstUI CGCG 2 cut(s) 1923, 2148
BstV1I GCAGC 8 cut(s) 328, 1626, 3246, 3416, 3588, 3929, 5213, 5289
BstV2I GAAGAC 5 cut(s) 579, 1086, 1289, 1508, 4656
BstX2I RGATCY 5 cut(s) 1027, 1705, 3346, 3356, 5156
BstXI CCANNNNNNTGG 2 cut(s) 581, 2500
BstYI RGATCY 5 cut(s) 1027, 1705, 3346, 3356, 5156
BstZI CGGCCG 1 cut(s) 2149
Bsu36I CCTNAGG 3 cut(s) 45, 2715, 3269
BsuI GTATCC 2 cut(s) 3338, 3619
BtrI CACGTC 2 cut(s) 818, 2585
BtsI GCAGTG 3 cut(s) 153, 529, 1447
BveI ACCTGC 1 cut(s) 149
Cac8I GCNNGC 9 cut(s) 217, 346, 1438, 1919, 2526, 2711, 3497, 3915, 5138
CaiI CAGNNNCTG 3 cut(s) 1337, 3429, 3689
CciI TCATGA 3 cut(s) 2443, 3937, 4915
CfoI GCGC 2 cut(s) 1923, 2148
Cfr10I RCCGGY 2 cut(s) 614, 2709
CseI GACGC 3 cut(s) 31, 3265, 4933
Csp6I GTAC 7 cut(s) 2262, 3094, 3735, 4043, 4361, 4505, 4826
CspCI CAANNNNNGTGG 2 cut(s) 337, 372
CviQI GTAC 7 cut(s) 2262, 3094, 3735, 4043, 4361, 4505, 4826
DraI TTTAAA 3 cut(s) 3048, 4395, 5253
DrdI GACNNNNNNGTC 1 cut(s) 663
DseDI GACNNNNNNGTC 1 cut(s) 663
EaeI YGGCCR 6 cut(s) 1693, 2149, 2360, 2587, 3624, 4235
EagI CGGCCG 1 cut(s) 2149
EciI GGCGGA 2 cut(s) 972, 1356
EclXI CGGCCG 1 cut(s) 2149
Eco130I CCWWGG 6 cut(s) 253, 2135, 2900, 4982, 5002, 5160
Eco147I AGGCCT 2 cut(s) 633, 2887
Eco24I GRGCYC 1 cut(s) 5262
Eco31I GGTCTC 2 cut(s) 1819, 2890
Eco32I GATATC 1 cut(s) 2246
Eco47I GGWCC 2 cut(s) 1005, 4409
Eco52I CGGCCG 1 cut(s) 2149
Eco81I CCTNAGG 3 cut(s) 45, 2715, 3269
Eco88I CYCGRG 1 cut(s) 4725
EcoNI CCTNNNNNAGG 1 cut(s) 5006
EcoO109I RGGNCCY 1 cut(s) 2282
EcoRI GAATTC 4 cut(s) 129, 624, 4865, 4894
EcoRII CCWGG 8 cut(s) 1216, 1642, 1756, 1767, 2086, 2646, 4155, 5261
EcoRV GATATC 1 cut(s) 2246
EcoT14I CCWWGG 6 cut(s) 253, 2135, 2900, 4982, 5002, 5160
EcoT22I ATGCAT 3 cut(s) 763, 5066, 5114
EcoT38I GRGCYC 1 cut(s) 5262
ErhI CCWWGG 6 cut(s) 253, 2135, 2900, 4982, 5002, 5160
Esp3I CGTCTC 2 cut(s) 14, 3748
FalI AAGNNNNNCTT 6 cut(s) 1531, 1563, 4388, 4420, 5061, 5093
FaqI GGGAC 3 cut(s) 1775, 4422, 4817
FauNDI CATATG 2 cut(s) 3550, 3654
FbaI TGATCA 2 cut(s) 685, 2440
FblI GTMKAC 5 cut(s) 814, 1111, 1267, 1927, 2581
Fnu4HI GCNGC 9 cut(s) 342, 1640, 2149, 3260, 3430, 3577, 3918, 5202, 5278
FriOI GRGCYC 1 cut(s) 5262
FseI GGCCGGCC 1 cut(s) 2713
Fsp4HI GCNGC 9 cut(s) 342, 1640, 2149, 3260, 3430, 3577, 3918, 5202, 5278
FspBI CTAG 8 cut(s) 831, 2379, 2421, 2889, 2901, 3365, 3501, 4934
GlaI GCGC 2 cut(s) 1922, 2147
GluI GCNGC 9 cut(s) 342, 1640, 2149, 3260, 3430, 3577, 3918, 5202, 5278
GsaI CCCAGC 3 cut(s) 1992, 3198, 4072
HapII CCGG 6 cut(s) 615, 847, 2040, 2190, 2710, 4539
HgaI GACGC 3 cut(s) 31, 3265, 4933
HhaI GCGC 2 cut(s) 1923, 2148
Hin6I GCGC 2 cut(s) 1921, 2146
HinP1I GCGC 2 cut(s) 1921, 2146
HincII GTYRAC 5 cut(s) 1063, 1112, 1268, 1928, 5121
HindII GTYRAC 5 cut(s) 1063, 1112, 1268, 1928, 5121
HindIII AAGCTT 6 cut(s) 1259, 1727, 1869, 3897, 4379, 5267
HpaI GTTAAC 1 cut(s) 5121
HpaII CCGG 6 cut(s) 615, 847, 2040, 2190, 2710, 4539
Hpy99I CGWCG 1 cut(s) 4818
HpyCH4III ACNGT 8 cut(s) 927, 2431, 2579, 2629, 2758, 2978, 3935, 4304
HpyCH4IV ACGT 3 cut(s) 817, 2584, 4045
HpySE526I ACGT 3 cut(s) 817, 2584, 4045
HspAI GCGC 2 cut(s) 1921, 2146
KpnI GGTACC 2 cut(s) 3097, 3738
KroI GCCGGC 1 cut(s) 2709
KroNI GCCGGC 1 cut(s) 2711
Ksp22I TGATCA 2 cut(s) 685, 2440
KspAI GTTAAC 1 cut(s) 5121
LmnI GCTCC 6 cut(s) 77, 1334, 3286, 4444, 4580, 5274
Lsp1109I GCAGC 8 cut(s) 328, 1626, 3246, 3416, 3588, 3929, 5213, 5289
MaeI CTAG 8 cut(s) 831, 2379, 2421, 2889, 2901, 3365, 3501, 4934
MaeII ACGT 3 cut(s) 817, 2584, 4045
MfeI CAATTG 3 cut(s) 3332, 3394, 5300
MflI RGATCY 5 cut(s) 1027, 1705, 3346, 3356, 5156
MhlI GDGCHC 2 cut(s) 3647, 5262
MlsI TGGCCA 2 cut(s) 3626, 4237
MluNI TGGCCA 2 cut(s) 3626, 4237
MlyI GAGTC 4 cut(s) 799, 1076, 4730, 4739
MmeI TCCRAC 6 cut(s) 2025, 2044, 2302, 2611, 2644, 3687
Mox20I TGGCCA 2 cut(s) 3626, 4237
Mph1103I ATGCAT 3 cut(s) 763, 5066, 5114
MroNI GCCGGC 1 cut(s) 2709
MroXI GAANNNNTTC 4 cut(s) 381, 624, 5100, 5112
MscI TGGCCA 2 cut(s) 3626, 4237
MslI CAYNNNNRTG 4 cut(s) 2448, 2498, 5004, 5069
Msp20I TGGCCA 2 cut(s) 3626, 4237
MspCI CTTAAG 1 cut(s) 2618
MspI CCGG 6 cut(s) 615, 847, 2040, 2190, 2710, 4539
MunI CAATTG 3 cut(s) 3332, 3394, 5300
Mva1269I GAATGC 6 cut(s) 507, 2421, 2526, 2932, 5112, 5114
MvaI CCWGG 8 cut(s) 1218, 1644, 1758, 1769, 2088, 2648, 4157, 5263
MvnI CGCG 2 cut(s) 1923, 2148
NaeI GCCGGC 1 cut(s) 2711
NciI CCSGG 3 cut(s) 847, 2041, 4539
NdeI CATATG 2 cut(s) 3550, 3654
NgoMIV GCCGGC 1 cut(s) 2709
NlaIV GGNNCC 8 cut(s) 1006, 1707, 2283, 3095, 3736, 4074, 4410, 5260
NmuCI GTSAC 8 cut(s) 122, 437, 2933, 3389, 3825, 4334, 4481, 4642
NsiI ATGCAT 3 cut(s) 763, 5066, 5114
NspI RCATGY 1 cut(s) 348
NspV TTCGAA 1 cut(s) 1280
OliI CACNNNNGTG 1 cut(s) 5004
PaeI GCATGC 1 cut(s) 348
PagI TCATGA 3 cut(s) 2443, 3937, 4915
PaqCI CACCTGC 1 cut(s) 149
PceI AGGCCT 2 cut(s) 633, 2887
PctI GAATGC 6 cut(s) 507, 2421, 2526, 2932, 5112, 5114
PdiI GCCGGC 1 cut(s) 2711
PdmI GAANNNNTTC 4 cut(s) 381, 624, 5100, 5112
PfeI GAWTC 9 cut(s) 898, 1649, 1698, 3518, 3700, 3759, 4460, 4531, 4736
PfoI TCCNGGA 2 cut(s) 1767, 4537
PkrI GCNGC 9 cut(s) 343, 1641, 2150, 3261, 3431, 3578, 3919, 5203, 5279
PleI GAGTC 4 cut(s) 798, 1076, 4729, 4738
PpsI GAGTC 4 cut(s) 798, 1076, 4729, 4738
Ppu21I YACGTR 1 cut(s) 4046
PshBI ATTAAT 1 cut(s) 4179
PsiI TTATAA 1 cut(s) 2544
Psp6I CCWGG 8 cut(s) 1216, 1642, 1756, 1767, 2086, 2646, 4155, 5261
PspFI CCCAGC 3 cut(s) 1988, 3194, 4068
PspGI CCWGG 8 cut(s) 1216, 1642, 1756, 1767, 2086, 2646, 4155, 5261
PspN4I GGNNCC 8 cut(s) 1006, 1707, 2283, 3095, 3736, 4074, 4410, 5260
PspOMI GGGCCC 1 cut(s) 5258
PstI CTGCAG 2 cut(s) 160, 3161
PstNI CAGNNNCTG 3 cut(s) 1337, 3429, 3689
PsuI RGATCY 5 cut(s) 1027, 1705, 3346, 3356, 5156
RigI GGCCGGCC 1 cut(s) 2713
RsaI GTAC 7 cut(s) 2263, 3095, 3736, 4044, 4362, 4506, 4827
RsaNI GTAC 7 cut(s) 2262, 3094, 3735, 4043, 4361, 4505, 4826
RseI CAYNNNNRTG 4 cut(s) 2448, 2498, 5004, 5069
SalI GTCGAC 3 cut(s) 1110, 1266, 1926
SatI GCNGC 9 cut(s) 342, 1640, 2149, 3260, 3430, 3577, 3918, 5202, 5278
SchI GAGTC 4 cut(s) 799, 1076, 4730, 4739
SduI GDGCHC 2 cut(s) 3647, 5262
SfcI CTRYAG 2 cut(s) 156, 3157
SfuI TTCGAA 1 cut(s) 1280
SinI GGWCC 2 cut(s) 1005, 4409
SmiMI CAYNNNNRTG 4 cut(s) 2448, 2498, 5004, 5069
SmlI CTYRAG 5 cut(s) 902, 2618, 3013, 3170, 3846
SmoI CTYRAG 5 cut(s) 902, 2618, 3013, 3170, 3846
SphI GCATGC 1 cut(s) 348
SseBI AGGCCT 2 cut(s) 633, 2887
SsiI CCGC 6 cut(s) 186, 957, 1367, 1923, 2148, 4496
SspI AATATT 2 cut(s) 2392, 4183
SspMI CTAG 8 cut(s) 831, 2379, 2421, 2889, 2901, 3365, 3501, 4934
StuI AGGCCT 2 cut(s) 633, 2887
StyI CCWWGG 6 cut(s) 253, 2135, 2900, 4982, 5002, 5160
TaaI ACNGT 8 cut(s) 927, 2431, 2579, 2629, 2758, 2978, 3935, 4304
TaiI ACGT 3 cut(s) 820, 2587, 4048
TaqI TCGA 9 cut(s) 1111, 1267, 1280, 1859, 1927, 2846, 3379, 3794, 4557
TaqII GACCGA 1 cut(s) 2170
TatI WGTACW 2 cut(s) 4360, 4504
TauI GCSGC 1 cut(s) 2151
TfiI GAWTC 9 cut(s) 898, 1649, 1698, 3518, 3700, 3759, 4460, 4531, 4736
TseFI GTSAC 8 cut(s) 122, 437, 2933, 3389, 3825, 4334, 4481, 4642
TseI GCWGC 8 cut(s) 341, 1639, 3259, 3429, 3576, 3917, 5201, 5277
Tsp45I GTSAC 8 cut(s) 122, 437, 2933, 3389, 3825, 4334, 4481, 4642
TspGWI ACGGA 3 cut(s) 141, 2828, 4317
Vha464I CTTAAG 1 cut(s) 2618
VneI GTGCAC 1 cut(s) 3643
VpaK11BI GGWCC 2 cut(s) 1005, 4409
VspI ATTAAT 1 cut(s) 4179
XagI CCTNNNNNAGG 1 cut(s) 5006
XbaI TCTAGA 1 cut(s) 4933
XceI RCATGY 1 cut(s) 348
XcmI CCANNNNNNNNNTGG 4 cut(s) 949, 3503, 4083, 4153
XmaJI CCTAGG 1 cut(s) 2900
XmiI GTMKAC 5 cut(s) 814, 1111, 1267, 1927, 2581
XmnI GAANNNNTTC 4 cut(s) 381, 624, 5100, 5112
XspI CTAG 8 cut(s) 831, 2379, 2421, 2889, 2901, 3365, 3501, 4934
Zsp2I ATGCAT 3 cut(s) 763, 5066, 5114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.