Rroxscaffold_4G00279190
ERF Family

A domain family that is part of the cupin metalloenzyme superfamily.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0001331
Physical Location & Seq
Reverse (-)
2044047 .. 2051364
7318 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00279190.1

Sequence Viewer

Length: 1866 bp
ATGGACAAATTCAACAGTGACAAATGCAATACATCCATTGTCAATTTCCACAGAAGCTGCCCCAATCCTGATTGTTCTTATGATCTCTGTGTCACTTGTTGTTGGGAACTAAGGAAAGGATGTCAGCTTGGAGGCATTGAAGCAGAATCTTCTGGTCAACAGTTTTGTGAAAGAGTACACAGTAAAGGTACAGTTTCAGATGGCCAGATTCCGGAAAATGTGAATGGAAATATATCACAGAGCGTACCAGTAAATGAGTTCCCAAATGATATATCTTCTGAGTTTCCTAGTTGGAAAGCAGAGGCTGATGGAAGGATTCATTGTCCACCAAAAGCACTGGGAGGTTGTGGTACCCAGTTACTTGAACTCAGACGTATATTTGAAGCAGACTGGGTTGAAAAACTAATTTTCAGCTCCGAGGACCTCTCTGTTCATTATCAACCATCAGATGTTGATTTTTCTCAAGGATGTTCTGCATGTCATTCTATCAGTTCTGCATGCAATGGTGTAAAAGCTTCCGAAGTGAGGCATGCAGCTGATAGACTGAACTGTCATGATAACTTCCTTTACTGCCCGGATTCTGTACATTTGGGAAATGATGACATTGAGCATTTTCAATTACACTGGAGGAGAGGGGAACCAGTTGTAGTTAGAAATGTACTTGAAAAGGCTACTGGCCTTAGCTGGGAACCAATGGTAATGTGGAGGGCTTTTATTGGGGCAAAAAAAGTACTGAAAGAGGAGGCAGCGAAGGTCAAAGCCATTGATTGCCTTGATTGGTGTGAGGTTGAGATTAATATTTTTCAGTTCTTTAAGGGCTATATAGAGGGTCGTAAATACACTAATGGGTGGCCTGAGATGTTGAAGCTGAAGGATTGGCCTCCATCAAATCTCTTTGAAGAGTGTTTGCCAAGGCACGGTGCTGAATTTATGGCCATGCTTCCCTTTAGTGACTATACCCATCCCAAATCAGGTGTTCTAAATCTTGCAACAAGGCTTCCTATTGCTTTGAAGCCAGACTTGGGTCCTAAGACATACATCGCTTATGGTACTATGGAGGAGCTTGGTAGAGGAGATTCAGTAACGAAACTGCATTGTGACATCTCTGATGCAGTTAATGTGCTGACTCATGCAACTGAAGTAAAGATCCCTCCAGGGCAGGATAAAATCATTGACAAATTACAGAAGAAATATGAAGCTGAAGATGAAATAATTGAAGGAACTTCATGTAATGACGAACAATTTGAGCCTTCTAATGTAACACAAGACGTGAATTTTGTCCTTGGGACCGATCCCTCACAGCAAAAAGCTTCAGGAAATCTTATCAACAGAAAAGAGTCCATGGAGAGTTCAGATTCAATTAGAAGTAGTCAAAGTGATTATAAATCAGACGTTGCATATGGAGGCGCCGTTTGGGACATTTTCCGTCGGCAAGATGTTCCCAAGTTAACAGAATACCTGTTAAAGCATCAGAAAGAATTTCGCCACATTAGTAATCTTCCTGTGAAATCTATTACCCATCCTATTCATGACCAGACCCTTTATCTAGATGAGAAGCATAAAAAGAAGCTGAAGGAAGAGTTTGGTGTTGAACCTTGGACATTTGAGCAACACCTTGGTGAGGCTGTTTTCATTCCTGCGGGATGCCCACATCAAGTGAGAAATAGACAGTCGTGCATTAAAGTGGCCCTTGATTTTGTTTCCCCGGAAAACGTTCAAGAATGCATTCGGTTAACAGAGGAGTTTCGCTTGCTTCCAGAAAACCATAGATCCAGGGAAGATAAACTGGAGGTGAAGAAGATGGCACTGTATGCAGCAAGTGATGCTATAAGTGAAGCTGAAACTCTGAAGTCAAGAATCAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC WRC zf-4CXXC_R1

Protein Analysis

621

Amino Acids

70.27

Weight (kDa)

5.56

Isoelectric Point (pI)

48.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjC PF02373 456 - 566 1.2e-15 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1383
AasI GACNNNNNNGTC 1 cut(s) 549
Acc65I GGTACC 1 cut(s) 350
AccB1I GGYRCC 2 cut(s) 350, 1406
AccIII TCCGGA 1 cut(s) 211
AciI CCGC 1 cut(s) 1640
AclI AACGTT 1 cut(s) 1713
AclWI GGATC 3 cut(s) 1141, 1286, 1764
AcoI YGGCCR 2 cut(s) 202, 933
AcsI RAATTY 4 cut(s) 8, 926, 1273, 1478
AcuI CTGAAG 5 cut(s) 890, 1158, 1221, 1296, 1592
AcyI GRCGYC 1 cut(s) 1407
AfaI GTAC 8 cut(s) 177, 190, 246, 352, 585, 660, 732, 1051
AfiI CCNNNNNNNGG 7 cut(s) 211, 525, 685, 917, 971, 1022, 1621
AjiI CACGTC 1 cut(s) 1270
AjnI CCWGG 2 cut(s) 1153, 1772
AjuI GAANNNNNNNTTGG 2 cut(s) 1004, 1036
AleI CACNNNNGTG 1 cut(s) 1617
AlwI GGATC 3 cut(s) 1141, 1286, 1764
AlwNI CAGNNNCTG 2 cut(s) 57, 305
Aor13HI TCCGGA 1 cut(s) 211
AoxI GGCC 6 cut(s) 202, 676, 851, 878, 933, 1686
ApeKI GCWGC 4 cut(s) 57, 533, 746, 1814
ApoI RAATTY 4 cut(s) 8, 926, 1273, 1478
ArsI GACNNNNNNTTYG 4 cut(s) 1226, 1258, 1259, 1291
AseI ATTAAT 1 cut(s) 795
Asp700I GAANNNNTTC 2 cut(s) 1713, 1725
Asp718I GGTACC 1 cut(s) 350
AspLEI GCGC 1 cut(s) 1409
AspS9I GGNCC 4 cut(s) 421, 1025, 1287, 1687
AsuC2I CCSGG 2 cut(s) 575, 1706
AsuHPI GGTGA 2 cut(s) 1631, 1804
AvaII GGWCC 3 cut(s) 421, 1025, 1287
BalI TGGCCA 2 cut(s) 204, 935
BanI GGYRCC 2 cut(s) 350, 1406
BbvI GCAGC 4 cut(s) 44, 545, 758, 1826
BccI CCATC 7 cut(s) 194, 302, 451, 892, 969, 1527, 1795
BceAI ACGGC 1 cut(s) 1394
BciT130I CCWGG 2 cut(s) 1155, 1774
BcnI CCSGG 2 cut(s) 575, 1706
BfaI CTAG 2 cut(s) 288, 1547
BfoI RGCGCY 1 cut(s) 1410
BisI GCNGC 4 cut(s) 58, 534, 747, 1815
BlsI GCNGC 4 cut(s) 59, 535, 748, 1816
BmcAI AGTACT 1 cut(s) 732
Bme1390I CCNGG 4 cut(s) 575, 1155, 1706, 1774
Bme18I GGWCC 3 cut(s) 421, 1025, 1287
BmgBI CACGTC 1 cut(s) 1270
BmgT120I GGNCC 4 cut(s) 421, 1025, 1287, 1687
BmiI GGNNCC 6 cut(s) 352, 639, 690, 1026, 1288, 1408
BmrFI CCNGG 4 cut(s) 575, 1155, 1706, 1774
BmrI ACTGGG 3 cut(s) 347, 349, 400
BmsI GCATC 4 cut(s) 1099, 1477, 1634, 1813
BmuI ACTGGG 3 cut(s) 347, 349, 400
BoxI GACNNNNGTC 1 cut(s) 1023
BplI GAGNNNNNCTC 2 cut(s) 410, 442
BpmI CTGGAG 3 cut(s) 646, 1137, 1808
Bpu10I CCTNAGC 1 cut(s) 680
BpuEI CTTGAG 1 cut(s) 447
BpuMI CCSGG 2 cut(s) 575, 1706
BsaHI GRCGYC 1 cut(s) 1407
BsaJI CCNNGG 9 cut(s) 417, 911, 1154, 1282, 1341, 1595, 1615, 1704, 1773
BsaWI WCCGGW 1 cut(s) 211
BsaXI ACNNNNNCTCC 4 cut(s) 1065, 1095, 1395, 1425
Bsc4I CCNNNNNNNGG 7 cut(s) 211, 525, 685, 917, 971, 1022, 1621
Bse1I ACTGG 8 cut(s) 248, 342, 355, 395, 629, 641, 679, 1791
Bse3DI GCAATG 1 cut(s) 508
BseAI TCCGGA 1 cut(s) 211
BseBI CCWGG 2 cut(s) 1155, 1774
BseDI CCNNGG 9 cut(s) 417, 911, 1154, 1282, 1341, 1595, 1615, 1704, 1773
BseGI GGATG 6 cut(s) 32, 125, 473, 961, 1519, 1649
BseLI CCNNNNNNNGG 7 cut(s) 211, 525, 685, 917, 971, 1022, 1621
BseMI GCAATG 1 cut(s) 508
BseMII CTCAG 3 cut(s) 270, 382, 846
BseNI ACTGG 8 cut(s) 248, 342, 355, 395, 629, 641, 679, 1791
BseRI GAGGAG 5 cut(s) 643, 755, 1073, 1086, 1754
BseXI GCAGC 4 cut(s) 44, 545, 758, 1826
BseYI CCCAGC 1 cut(s) 684
BshFI GGCC 6 cut(s) 204, 678, 853, 880, 935, 1688
BshNI GGYRCC 2 cut(s) 350, 1406
BsiSI CCGG 3 cut(s) 212, 575, 1706
BslFI GGGAC 2 cut(s) 1300, 1430
BslI CCNNNNNNNGG 7 cut(s) 211, 525, 685, 917, 971, 1022, 1621
BsmFI GGGAC 2 cut(s) 1300, 1430
BsmI GAATGC 2 cut(s) 1725, 1727
BsnI GGCC 6 cut(s) 204, 678, 853, 880, 935, 1688
Bsp13I TCCGGA 1 cut(s) 211
Bsp1407I TGTACA 1 cut(s) 583
Bsp143I GATC 4 cut(s) 82, 1146, 1291, 1769
Bsp19I CCATGG 1 cut(s) 1341
BspACI CCGC 1 cut(s) 1640
BspANI GGCC 6 cut(s) 204, 678, 853, 880, 935, 1688
BspCNI CTCAG 3 cut(s) 271, 381, 847
BspEI TCCGGA 1 cut(s) 211
BspHI TCATGA 2 cut(s) 553, 1528
BspLI GGNNCC 6 cut(s) 352, 639, 690, 1026, 1288, 1408
BspPI GGATC 3 cut(s) 1141, 1286, 1764
BspT107I GGYRCC 2 cut(s) 350, 1406
BsrDI GCAATG 1 cut(s) 508
BsrGI TGTACA 1 cut(s) 583
BsrI ACTGG 8 cut(s) 248, 342, 355, 395, 629, 641, 679, 1791
BssECI CCNNGG 9 cut(s) 417, 911, 1154, 1282, 1341, 1595, 1615, 1704, 1773
BssMI GATC 4 cut(s) 82, 1146, 1291, 1769
BssNI GRCGYC 1 cut(s) 1407
BssT1I CCWWGG 5 cut(s) 911, 1282, 1341, 1595, 1615
Bst2UI CCWGG 2 cut(s) 1155, 1774
Bst4CI ACNGT 8 cut(s) 17, 162, 182, 193, 551, 920, 1671, 1809
Bst6I CTCTTC 2 cut(s) 894, 1572
BstACI GRCGYC 1 cut(s) 1407
BstAPI GCANNNNNTGC 2 cut(s) 1811, 1823
BstAUI TGTACA 1 cut(s) 583
BstC8I GCNNGC 3 cut(s) 499, 531, 1751
BstDEI CTNAG 6 cut(s) 110, 279, 368, 680, 855, 1029
BstDSI CCRYGG 1 cut(s) 1341
BstENI CCTNNNNNAGG 1 cut(s) 1619
BstF5I GGATG 6 cut(s) 32, 125, 473, 961, 1519, 1649
BstH2I RGCGCY 1 cut(s) 1410
BstHHI GCGC 1 cut(s) 1409
BstKTI GATC 4 cut(s) 85, 1149, 1294, 1772
BstMBI GATC 4 cut(s) 82, 1146, 1291, 1769
BstMWI GCNNNNNNNGC 2 cut(s) 1811, 1823
BstNI CCWGG 2 cut(s) 1155, 1774
BstNSI RCATGY 3 cut(s) 480, 501, 533
BstPAI GACNNNNGTC 1 cut(s) 1023
BstSCI CCNGG 4 cut(s) 573, 1153, 1704, 1772
BstV1I GCAGC 4 cut(s) 44, 545, 758, 1826
BstX2I RGATCY 2 cut(s) 1146, 1769
BstYI RGATCY 2 cut(s) 1146, 1769
BsuRI GGCC 6 cut(s) 204, 678, 853, 880, 935, 1688
BtgI CCRYGG 1 cut(s) 1341
BtgZI GCGATG 1 cut(s) 1024
BtrI CACGTC 1 cut(s) 1270
BtsCI GGATG 6 cut(s) 32, 125, 473, 961, 1519, 1649
BtsIMutI CAGTG 4 cut(s) 22, 335, 622, 1805
Cac8I GCNNGC 3 cut(s) 499, 531, 1751
CaiI CAGNNNCTG 2 cut(s) 57, 305
CciI TCATGA 2 cut(s) 553, 1528
CfoI GCGC 1 cut(s) 1409
Cfr13I GGNCC 4 cut(s) 421, 1025, 1287, 1687
Csp6I GTAC 8 cut(s) 176, 189, 245, 351, 584, 659, 731, 1050
CviAII CATG 9 cut(s) 477, 498, 530, 554, 937, 1130, 1227, 1342, 1529
CviQI GTAC 8 cut(s) 176, 189, 245, 351, 584, 659, 731, 1050
DdeI CTNAG 6 cut(s) 110, 279, 368, 680, 855, 1029
DinI GGCGCC 1 cut(s) 1408
DpnI GATC 4 cut(s) 84, 1148, 1293, 1771
DpnII GATC 4 cut(s) 82, 1146, 1291, 1769
DrdI GACNNNNNNGTC 1 cut(s) 549
DseDI GACNNNNNNGTC 1 cut(s) 549
EaeI YGGCCR 2 cut(s) 202, 933
Eam1104I CTCTTC 2 cut(s) 894, 1572
EarI CTCTTC 2 cut(s) 894, 1572
Eco130I CCWWGG 5 cut(s) 911, 1282, 1341, 1595, 1615
Eco47I GGWCC 3 cut(s) 421, 1025, 1287
Eco57I CTGAAG 5 cut(s) 890, 1158, 1221, 1296, 1592
EcoNI CCTNNNNNAGG 1 cut(s) 1619
EcoO109I RGGNCCY 2 cut(s) 421, 1025
EcoRII CCWGG 2 cut(s) 1153, 1772
EcoT14I CCWWGG 5 cut(s) 911, 1282, 1341, 1595, 1615
EcoT22I ATGCAT 1 cut(s) 1727
EgeI GGCGCC 1 cut(s) 1408
EheI GGCGCC 1 cut(s) 1408
ErhI CCWWGG 5 cut(s) 911, 1282, 1341, 1595, 1615
FaeI CATG 9 cut(s) 480, 501, 533, 557, 940, 1133, 1230, 1345, 1532
FalI AAGNNNNNCTT 4 cut(s) 1004, 1036, 1674, 1706
FaqI GGGAC 2 cut(s) 1300, 1430
FatI CATG 9 cut(s) 476, 497, 529, 553, 936, 1129, 1226, 1341, 1528
FauI CCCGC 1 cut(s) 1633
FauNDI CATATG 1 cut(s) 1399
Fnu4HI GCNGC 4 cut(s) 58, 534, 747, 1815
FokI GGATG 6 cut(s) 19, 132, 480, 948, 1506, 1656
Fsp4HI GCNGC 4 cut(s) 58, 534, 747, 1815
FspBI CTAG 2 cut(s) 288, 1547
GlaI GCGC 1 cut(s) 1408
GluI GCNGC 4 cut(s) 58, 534, 747, 1815
GsaI CCCAGC 1 cut(s) 688
GsuI CTGGAG 3 cut(s) 646, 1137, 1808
HaeII RGCGCY 1 cut(s) 1410
HaeIII GGCC 6 cut(s) 204, 678, 853, 880, 935, 1688
HapII CCGG 3 cut(s) 212, 575, 1706
HhaI GCGC 1 cut(s) 1409
Hin1I GRCGYC 1 cut(s) 1407
Hin1II CATG 9 cut(s) 480, 501, 533, 557, 940, 1133, 1230, 1345, 1532
Hin6I GCGC 1 cut(s) 1407
HinP1I GCGC 1 cut(s) 1407
HincII GTYRAC 3 cut(s) 158, 1449, 1734
HindII GTYRAC 3 cut(s) 158, 1449, 1734
HindIII AAGCTT 2 cut(s) 513, 1308
HinfI GANTC 9 cut(s) 146, 208, 316, 578, 1076, 1126, 1337, 1355, 1857
HpaI GTTAAC 2 cut(s) 1449, 1734
HpaII CCGG 3 cut(s) 212, 575, 1706
HphI GGTGA 2 cut(s) 1631, 1804
Hpy166II GTNNAC 5 cut(s) 158, 178, 326, 1449, 1734
Hpy188III TCNNGA 9 cut(s) 68, 212, 554, 1314, 1529, 1547, 1718, 1757, 1854
Hpy8I GTNNAC 5 cut(s) 158, 178, 326, 1449, 1734
Hpy99I CGWCG 1 cut(s) 1431
HpyAV CCTTC 6 cut(s) 306, 745, 865, 1211, 1260, 1567
HpyCH4III ACNGT 8 cut(s) 17, 162, 182, 193, 551, 920, 1671, 1809
HpyCH4IV ACGT 4 cut(s) 373, 1269, 1392, 1713
HpyF10VI GCNNNNNNNGC 2 cut(s) 1811, 1823
HpyF3I CTNAG 6 cut(s) 110, 279, 368, 680, 855, 1029
HpySE526I ACGT 4 cut(s) 373, 1269, 1392, 1713
Hsp92I GRCGYC 1 cut(s) 1407
Hsp92II CATG 9 cut(s) 480, 501, 533, 557, 940, 1133, 1230, 1345, 1532
HspAI GCGC 1 cut(s) 1407
KasI GGCGCC 1 cut(s) 1406
Kpn2I TCCGGA 1 cut(s) 211
KpnI GGTACC 1 cut(s) 354
KspAI GTTAAC 2 cut(s) 1449, 1734
Kzo9I GATC 4 cut(s) 82, 1146, 1291, 1769
LmnI GCTCC 2 cut(s) 419, 1060
Lsp1109I GCAGC 4 cut(s) 44, 545, 758, 1826
LweI GCATC 4 cut(s) 1099, 1477, 1634, 1813
MaeI CTAG 2 cut(s) 288, 1547
MaeII ACGT 4 cut(s) 373, 1269, 1392, 1713
MaeIII GTNAC 7 cut(s) 17, 91, 357, 950, 1081, 1097, 1258
MalI GATC 4 cut(s) 84, 1148, 1293, 1771
MboI GATC 4 cut(s) 82, 1146, 1291, 1769
MflI RGATCY 2 cut(s) 1146, 1769
MlsI TGGCCA 2 cut(s) 204, 935
MluNI TGGCCA 2 cut(s) 204, 935
Mly113I GGCGCC 1 cut(s) 1407
MlyI GAGTC 2 cut(s) 1120, 1346
MmeI TCCRAC 1 cut(s) 272
Mox20I TGGCCA 2 cut(s) 204, 935
Mph1103I ATGCAT 1 cut(s) 1727
MroI TCCGGA 1 cut(s) 211
MroXI GAANNNNTTC 2 cut(s) 1713, 1725
MscI TGGCCA 2 cut(s) 204, 935
MseI TTAA 7 cut(s) 795, 813, 1116, 1448, 1463, 1680, 1733
MslI CAYNNNNRTG 2 cut(s) 1617, 1682
Msp20I TGGCCA 2 cut(s) 204, 935
MspA1I CMGCKG 1 cut(s) 536
MspI CCGG 3 cut(s) 212, 575, 1706
MspR9I CCNGG 4 cut(s) 575, 1155, 1706, 1774
Mva1269I GAATGC 2 cut(s) 1725, 1727
MvaI CCWGG 2 cut(s) 1155, 1774
MwoI GCNNNNNNNGC 2 cut(s) 1811, 1823
NarI GGCGCC 1 cut(s) 1407
NciI CCSGG 2 cut(s) 575, 1706
NcoI CCATGG 1 cut(s) 1341
NdeI CATATG 1 cut(s) 1399
NdeII GATC 4 cut(s) 82, 1146, 1291, 1769
NlaIII CATG 9 cut(s) 480, 501, 533, 557, 940, 1133, 1230, 1345, 1532
NlaIV GGNNCC 6 cut(s) 352, 639, 690, 1026, 1288, 1408
NmuCI GTSAC 4 cut(s) 17, 91, 950, 1097
NsiI ATGCAT 1 cut(s) 1727
NspI RCATGY 3 cut(s) 480, 501, 533
OliI CACNNNNGTG 1 cut(s) 1617
PaeI GCATGC 2 cut(s) 501, 533
PagI TCATGA 2 cut(s) 553, 1528
PctI GAATGC 2 cut(s) 1725, 1727
PdmI GAANNNNTTC 2 cut(s) 1713, 1725
PfeI GAWTC 7 cut(s) 146, 208, 316, 578, 1076, 1355, 1857
PkrI GCNGC 4 cut(s) 59, 535, 748, 1816
PleI GAGTC 2 cut(s) 1120, 1345
PluTI GGCGCC 1 cut(s) 1410
PpsI GAGTC 2 cut(s) 1120, 1345
PpuMI RGGWCCY 2 cut(s) 421, 1025
PshAI GACNNNNGTC 1 cut(s) 1023
PshBI ATTAAT 1 cut(s) 795
PsiI TTATAA 1 cut(s) 1383
Psp1406I AACGTT 1 cut(s) 1713
Psp5II RGGWCCY 2 cut(s) 421, 1025
Psp6I CCWGG 2 cut(s) 1153, 1772
PspFI CCCAGC 1 cut(s) 684
PspGI CCWGG 2 cut(s) 1153, 1772
PspN4I GGNNCC 6 cut(s) 352, 639, 690, 1026, 1288, 1408
PspPI GGNCC 4 cut(s) 421, 1025, 1287, 1687
PspPPI RGGWCCY 2 cut(s) 421, 1025
PstNI CAGNNNCTG 2 cut(s) 57, 305
PsuI RGATCY 2 cut(s) 1146, 1769
PvuII CAGCTG 1 cut(s) 536
RsaI GTAC 8 cut(s) 177, 190, 246, 352, 585, 660, 732, 1051
RsaNI GTAC 8 cut(s) 176, 189, 245, 351, 584, 659, 731, 1050
RseI CAYNNNNRTG 2 cut(s) 1617, 1682
SaqAI TTAA 7 cut(s) 795, 813, 1116, 1448, 1463, 1680, 1733
SatI GCNGC 4 cut(s) 58, 534, 747, 1815
Sau3AI GATC 4 cut(s) 82, 1146, 1291, 1769
Sau96I GGNCC 4 cut(s) 421, 1025, 1287, 1687
ScaI AGTACT 1 cut(s) 732
SchI GAGTC 2 cut(s) 1120, 1346
ScrFI CCNGG 4 cut(s) 575, 1155, 1706, 1774
SfaNI GCATC 4 cut(s) 1099, 1477, 1634, 1813
SfoI GGCGCC 1 cut(s) 1408
SinI GGWCC 3 cut(s) 421, 1025, 1287
SmiMI CAYNNNNRTG 2 cut(s) 1617, 1682
SmlI CTYRAG 1 cut(s) 462
SmoI CTYRAG 1 cut(s) 462
SphI GCATGC 2 cut(s) 501, 533
SsiI CCGC 1 cut(s) 1640
SspDI GGCGCC 1 cut(s) 1406
SspI AATATT 1 cut(s) 799
SspMI CTAG 2 cut(s) 288, 1547
StyD4I CCNGG 4 cut(s) 573, 1153, 1704, 1772
StyI CCWWGG 5 cut(s) 911, 1282, 1341, 1595, 1615
TaaI ACNGT 8 cut(s) 17, 162, 182, 193, 551, 920, 1671, 1809
TaiI ACGT 4 cut(s) 376, 1272, 1395, 1716
TaqII GACCGA 1 cut(s) 1304
TatI WGTACW 4 cut(s) 175, 583, 658, 730
TfiI GAWTC 7 cut(s) 146, 208, 316, 578, 1076, 1355, 1857
Tru1I TTAA 7 cut(s) 795, 813, 1116, 1448, 1463, 1680, 1733
Tru9I TTAA 7 cut(s) 795, 813, 1116, 1448, 1463, 1680, 1733
TscAI CASTG 4 cut(s) 22, 342, 629, 1812
TseFI GTSAC 4 cut(s) 17, 91, 950, 1097
TseI GCWGC 4 cut(s) 57, 533, 746, 1814
Tsp45I GTSAC 4 cut(s) 17, 91, 950, 1097
TspDTI ATGAA 7 cut(s) 308, 422, 1209, 1215, 1221, 1517, 1621
TspGWI ACGGA 1 cut(s) 1415
TspRI CASTG 4 cut(s) 22, 342, 629, 1812
VpaK11BI GGWCC 3 cut(s) 421, 1025, 1287
VspI ATTAAT 1 cut(s) 795
XagI CCTNNNNNAGG 1 cut(s) 1619
XapI RAATTY 4 cut(s) 8, 926, 1273, 1478
XbaI TCTAGA 1 cut(s) 1546
XceI RCATGY 3 cut(s) 480, 501, 533
XcmI CCANNNNNNNNNTGG 1 cut(s) 699
XmnI GAANNNNTTC 2 cut(s) 1713, 1725
XspI CTAG 2 cut(s) 288, 1547
ZrmI AGTACT 1 cut(s) 732
Zsp2I ATGCAT 1 cut(s) 1727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.