A domain family that is part of the cupin metalloenzyme superfamily.
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3885 |
| AarI | CACCTGC | 1 cut(s) | 1490 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 537, 3051 |
| Acc36I | ACCTGC | 1 cut(s) | 1490 |
| Acc65I | GGTACC | 1 cut(s) | 2223 |
| AccB1I | GGYRCC | 4 cut(s) | 410, 2130, 2223, 3908 |
| AccI | GTMKAC | 6 cut(s) | 400, 529, 757, 1129, 1334, 2449 |
| AccII | CGCG | 1 cut(s) | 753 |
| AciI | CCGC | 3 cut(s) | 72, 753, 3614 |
| AclI | AACGTT | 1 cut(s) | 4215 |
| AclWI | GGATC | 6 cut(s) | 292, 319, 2484, 3643, 3788, 4266 |
| AcoI | YGGCCR | 4 cut(s) | 1272, 1322, 2704, 3435 |
| AcsI | RAATTY | 5 cut(s) | 1847, 1892, 3428, 3775, 3980 |
| AcuI | CTGAAG | 9 cut(s) | 563, 1701, 1788, 3392, 3660, 3723, 3798, 4094, 4370 |
| AcyI | GRCGYC | 1 cut(s) | 3909 |
| AflII | CTTAAG | 2 cut(s) | 2081, 2399 |
| AgeI | ACCGGT | 2 cut(s) | 830, 874 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 51, 83, 2339, 2371, 3506, 3538 |
| AleI | CACNNNNGTG | 1 cut(s) | 4119 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1089, 1121, 1725, 1757 |
| Alw21I | GWGCWC | 3 cut(s) | 250, 1631, 1981 |
| Alw26I | GTCTC | 9 cut(s) | 585, 865, 1546, 1657, 1801, 1924, 2020, 2032, 4370 |
| AlwI | GGATC | 6 cut(s) | 292, 319, 2484, 3643, 3788, 4266 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2559, 2807, 3083 |
| Ama87I | CYCGRG | 1 cut(s) | 2228 |
| ApeKI | GCWGC | 9 cut(s) | 885, 1142, 1355, 1481, 1541, 2559, 3035, 3248, 4316 |
| ApoI | RAATTY | 5 cut(s) | 1847, 1892, 3428, 3775, 3980 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 1656, 1660, 1688, 1692, 3728, 3760 |
| AseI | ATTAAT | 1 cut(s) | 3297 |
| AsiGI | ACCGGT | 2 cut(s) | 830, 874 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 663, 1296, 4215, 4227, 4363 |
| Asp718I | GGTACC | 1 cut(s) | 2223 |
| AspLEI | GCGC | 4 cut(s) | 753, 2068, 3661, 3911 |
| AspS9I | GGNCC | 8 cut(s) | 64, 509, 836, 2077, 2923, 3527, 3789, 4189 |
| AvaI | CYCGRG | 1 cut(s) | 2228 |
| AvaII | GGWCC | 5 cut(s) | 836, 2077, 2923, 3527, 3789 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 722, 755 |
| BalI | TGGCCA | 3 cut(s) | 1274, 2706, 3437 |
| BanI | GGYRCC | 4 cut(s) | 410, 2130, 2223, 3908 |
| BanII | GRGCYC | 1 cut(s) | 1631 |
| BauI | CACGAG | 2 cut(s) | 932, 2482 |
| BbsI | GAAGAC | 3 cut(s) | 308, 551, 2240 |
| Bbv12I | GWGCWC | 3 cut(s) | 250, 1631, 1981 |
| BbvCI | CCTCAGC | 1 cut(s) | 609 |
| BbvI | GCAGC | 9 cut(s) | 897, 1154, 1342, 1493, 1528, 2546, 3047, 3260, 4328 |
| BceAI | ACGGC | 2 cut(s) | 3818, 4395 |
| BcoDI | GTCTC | 9 cut(s) | 585, 865, 1546, 1657, 1801, 1924, 2020, 2032, 4370 |
| BfaI | CTAG | 9 cut(s) | 395, 1643, 1800, 1923, 2031, 2495, 2790, 4049, 4396 |
| BfmI | CTRYAG | 4 cut(s) | 734, 1479, 2060, 2287 |
| BfoI | RGCGCY | 1 cut(s) | 3912 |
| BfrI | CTTAAG | 2 cut(s) | 2081, 2399 |
| BfuAI | ACCTGC | 1 cut(s) | 1490 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1271 |
| BglII | AGATCT | 2 cut(s) | 2423, 4392 |
| BisI | GCNGC | 9 cut(s) | 886, 1143, 1356, 1482, 1542, 2560, 3036, 3249, 4317 |
| BlsI | GCNGC | 9 cut(s) | 887, 1144, 1357, 1483, 1543, 2561, 3037, 3250, 4318 |
| BmcAI | AGTACT | 2 cut(s) | 1704, 3234 |
| Bme18I | GGWCC | 5 cut(s) | 836, 2077, 2923, 3527, 3789 |
| BmeT110I | CYCGRG | 1 cut(s) | 2228 |
| BmgT120I | GGNCC | 8 cut(s) | 64, 509, 836, 2077, 2923, 3527, 3789, 4189 |
| BmrI | ACTGGG | 1 cut(s) | 2902 |
| BmuI | ACTGGG | 1 cut(s) | 2902 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3525 |
| BpiI | GAAGAC | 3 cut(s) | 308, 551, 2240 |
| BpmI | CTGGAG | 3 cut(s) | 3148, 3639, 4310 |
| Bpu10I | CCTNAGC | 2 cut(s) | 609, 3182 |
| BpuEI | CTTGAG | 3 cut(s) | 234, 2285, 2949 |
| BsaAI | YACGTR | 1 cut(s) | 2453 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2505 |
| BsaHI | GRCGYC | 1 cut(s) | 3909 |
| BsaI | GGTCTC | 6 cut(s) | 865, 1546, 1801, 1924, 2020, 2032 |
| BsaWI | WCCGGW | 2 cut(s) | 830, 874 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1584, 1614, 3567, 3597 |
| Bse118I | RCCGGY | 3 cut(s) | 830, 874, 1647 |
| Bse3DI | GCAATG | 2 cut(s) | 804, 1748 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2505 |
| BseJI | GATNNNNATC | 1 cut(s) | 2505 |
| BseMI | GCAATG | 2 cut(s) | 804, 1748 |
| BseMII | CTCAG | 9 cut(s) | 600, 1767, 1871, 1875, 1887, 2010, 2772, 2884, 3348 |
| BseRI | GAGGAG | 5 cut(s) | 3145, 3257, 3575, 3588, 4256 |
| BseXI | GCAGC | 9 cut(s) | 897, 1154, 1342, 1493, 1528, 2546, 3047, 3260, 4328 |
| BseYI | CCCAGC | 2 cut(s) | 2324, 3186 |
| Bsh1236I | CGCG | 1 cut(s) | 753 |
| Bsh1285I | CGRYCG | 1 cut(s) | 757 |
| BshNI | GGYRCC | 4 cut(s) | 410, 2130, 2223, 3908 |
| BshTI | ACCGGT | 2 cut(s) | 830, 874 |
| BsiEI | CGRYCG | 1 cut(s) | 757 |
| BsiHKAI | GWGCWC | 3 cut(s) | 250, 1631, 1981 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2228 |
| BsiSI | CCGG | 3 cut(s) | 831, 875, 1648 |
| BslFI | GGGAC | 3 cut(s) | 2090, 3802, 3932 |
| BsmAI | GTCTC | 9 cut(s) | 585, 865, 1546, 1657, 1801, 1924, 2020, 2032, 4370 |
| BsmBI | CGTCTC | 2 cut(s) | 1657, 4370 |
| BsmFI | GGGAC | 3 cut(s) | 2090, 3802, 3932 |
| BsmI | GAATGC | 4 cut(s) | 87, 1257, 4227, 4229 |
| Bso31I | GGTCTC | 6 cut(s) | 865, 1546, 1801, 1924, 2020, 2032 |
| BsoBI | CYCGRG | 1 cut(s) | 2228 |
| Bsp1286I | GDGCHC | 3 cut(s) | 250, 1631, 1981 |
| Bsp1407I | TGTACA | 2 cut(s) | 2458, 3085 |
| Bsp19I | CCATGG | 1 cut(s) | 3843 |
| BspACI | CCGC | 3 cut(s) | 72, 753, 3614 |
| BspCNI | CTCAG | 9 cut(s) | 601, 1768, 1870, 1876, 1886, 2009, 2773, 2883, 3349 |
| BspFNI | CGCG | 1 cut(s) | 753 |
| BspHI | TCATGA | 2 cut(s) | 3055, 4030 |
| BspMAI | CTGCAG | 3 cut(s) | 738, 1483, 2291 |
| BspMI | ACCTGC | 1 cut(s) | 1490 |
| BspPI | GGATC | 6 cut(s) | 292, 319, 2484, 3643, 3788, 4266 |
| BspT107I | GGYRCC | 4 cut(s) | 410, 2130, 2223, 3908 |
| BspTI | CTTAAG | 2 cut(s) | 2081, 2399 |
| BspTNI | GGTCTC | 6 cut(s) | 865, 1546, 1801, 1924, 2020, 2032 |
| BsrDI | GCAATG | 2 cut(s) | 804, 1748 |
| BsrFI | RCCGGY | 3 cut(s) | 830, 874, 1647 |
| BsrGI | TGTACA | 2 cut(s) | 2458, 3085 |
| BssAI | RCCGGY | 3 cut(s) | 830, 874, 1647 |
| BssNAI | GTATAC | 1 cut(s) | 2450 |
| BssNI | GRCGYC | 1 cut(s) | 3909 |
| BssSI | CACGAG | 2 cut(s) | 932, 2482 |
| BssT1I | CCWWGG | 6 cut(s) | 67, 3413, 3784, 3843, 4097, 4117 |
| Bst1107I | GTATAC | 1 cut(s) | 2450 |
| Bst2BI | CACGAG | 2 cut(s) | 932, 2482 |
| Bst6I | CTCTTC | 7 cut(s) | 363, 380, 1655, 1787, 2466, 3396, 4074 |
| BstACI | GRCGYC | 1 cut(s) | 3909 |
| BstAFI | CTTAAG | 2 cut(s) | 2081, 2399 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 825, 2295, 4313, 4325 |
| BstAUI | TGTACA | 2 cut(s) | 2458, 3085 |
| BstBAI | YACGTR | 1 cut(s) | 2453 |
| BstC8I | GCNNGC | 5 cut(s) | 1649, 3001, 3033, 3633, 4253 |
| BstDSI | CCRYGG | 1 cut(s) | 3843 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 2084, 2303, 4121 |
| BstFNI | CGCG | 1 cut(s) | 753 |
| BstH2I | RGCGCY | 1 cut(s) | 3912 |
| BstHHI | GCGC | 4 cut(s) | 753, 2068, 3661, 3911 |
| BstMAI | GTCTC | 9 cut(s) | 585, 865, 1546, 1657, 1801, 1924, 2020, 2032, 4370 |
| BstMCI | CGRYCG | 1 cut(s) | 757 |
| BstNSI | RCATGY | 4 cut(s) | 2982, 3003, 3035, 3635 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3525 |
| BstSFI | CTRYAG | 4 cut(s) | 734, 1479, 2060, 2287 |
| BstUI | CGCG | 1 cut(s) | 753 |
| BstV1I | GCAGC | 9 cut(s) | 897, 1154, 1342, 1493, 1528, 2546, 3047, 3260, 4328 |
| BstV2I | GAAGAC | 3 cut(s) | 308, 551, 2240 |
| BstX2I | RGATCY | 6 cut(s) | 311, 2423, 2476, 3648, 4271, 4392 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 644 |
| BstYI | RGATCY | 6 cut(s) | 311, 2423, 2476, 3648, 4271, 4392 |
| BstZ17I | GTATAC | 1 cut(s) | 2450 |
| BtgI | CCRYGG | 1 cut(s) | 3843 |
| BtgZI | GCGATG | 1 cut(s) | 3526 |
| BtsI | GCAGTG | 1 cut(s) | 2644 |
| BtsIMutI | CAGTG | 7 cut(s) | 355, 1849, 1972, 2144, 2644, 3124, 4307 |
| BveI | ACCTGC | 1 cut(s) | 1490 |
| Cac8I | GCNNGC | 5 cut(s) | 1649, 3001, 3033, 3633, 4253 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2559, 2807, 3083 |
| CciI | TCATGA | 2 cut(s) | 3055, 4030 |
| CfoI | GCGC | 4 cut(s) | 753, 2068, 3661, 3911 |
| Cfr10I | RCCGGY | 3 cut(s) | 830, 874, 1647 |
| Cfr13I | GGNCC | 8 cut(s) | 64, 509, 836, 2077, 2923, 3527, 3789, 4189 |
| CseI | GACGC | 1 cut(s) | 3637 |
| CspAI | ACCGGT | 2 cut(s) | 830, 874 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 343, 378 |
| DinI | GGCGCC | 1 cut(s) | 3910 |
| DraI | TTTAAA | 1 cut(s) | 2178 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 537, 3051 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 537, 3051 |
| EaeI | YGGCCR | 4 cut(s) | 1272, 1322, 2704, 3435 |
| Eam1104I | CTCTTC | 7 cut(s) | 363, 380, 1655, 1787, 2466, 3396, 4074 |
| EarI | CTCTTC | 7 cut(s) | 363, 380, 1655, 1787, 2466, 3396, 4074 |
| Ecl136II | GAGCTC | 1 cut(s) | 1629 |
| Eco130I | CCWWGG | 6 cut(s) | 67, 3413, 3784, 3843, 4097, 4117 |
| Eco147I | AGGCCT | 5 cut(s) | 90, 128, 1444, 1798, 1921 |
| Eco24I | GRGCYC | 1 cut(s) | 1631 |
| Eco31I | GGTCTC | 6 cut(s) | 865, 1546, 1801, 1924, 2020, 2032 |
| Eco47I | GGWCC | 5 cut(s) | 836, 2077, 2923, 3527, 3789 |
| Eco53kI | GAGCTC | 1 cut(s) | 1629 |
| Eco57I | CTGAAG | 9 cut(s) | 563, 1701, 1788, 3392, 3660, 3723, 3798, 4094, 4370 |
| Eco88I | CYCGRG | 1 cut(s) | 2228 |
| EcoICRI | GAGCTC | 1 cut(s) | 1629 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 2084, 2303, 4121 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2077, 2923, 3527 |
| EcoRI | GAATTC | 1 cut(s) | 1847 |
| EcoT14I | CCWWGG | 6 cut(s) | 67, 3413, 3784, 3843, 4097, 4117 |
| EcoT22I | ATGCAT | 4 cut(s) | 181, 1103, 1713, 4229 |
| EcoT38I | GRGCYC | 1 cut(s) | 1631 |
| EgeI | GGCGCC | 1 cut(s) | 3910 |
| EheI | GGCGCC | 1 cut(s) | 3910 |
| ErhI | CCWWGG | 6 cut(s) | 67, 3413, 3784, 3843, 4097, 4117 |
| Esp3I | CGTCTC | 2 cut(s) | 1657, 4370 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 648, 680, 3506, 3538 |
| FaqI | GGGAC | 3 cut(s) | 2090, 3802, 3932 |
| FauNDI | CATATG | 1 cut(s) | 3901 |
| FblI | GTMKAC | 6 cut(s) | 400, 529, 757, 1129, 1334, 2449 |
| Fnu4HI | GCNGC | 9 cut(s) | 886, 1143, 1356, 1482, 1542, 2560, 3036, 3249, 4317 |
| FriOI | GRGCYC | 1 cut(s) | 1631 |
| FseI | GGCCGGCC | 1 cut(s) | 1651 |
| Fsp4HI | GCNGC | 9 cut(s) | 886, 1143, 1356, 1482, 1542, 2560, 3036, 3249, 4317 |
| FspBI | CTAG | 9 cut(s) | 395, 1643, 1800, 1923, 2031, 2495, 2790, 4049, 4396 |
| GlaI | GCGC | 4 cut(s) | 752, 2067, 3660, 3910 |
| GluI | GCNGC | 9 cut(s) | 886, 1143, 1356, 1482, 1542, 2560, 3036, 3249, 4317 |
| GsaI | CCCAGC | 2 cut(s) | 2328, 3190 |
| GsuI | CTGGAG | 3 cut(s) | 3148, 3639, 4310 |
| HaeII | RGCGCY | 1 cut(s) | 3912 |
| HapII | CCGG | 3 cut(s) | 831, 875, 1648 |
| HgaI | GACGC | 1 cut(s) | 3637 |
| HhaI | GCGC | 4 cut(s) | 753, 2068, 3661, 3911 |
| Hin1I | GRCGYC | 1 cut(s) | 3909 |
| Hin6I | GCGC | 4 cut(s) | 751, 2066, 3659, 3909 |
| HinP1I | GCGC | 4 cut(s) | 751, 2066, 3659, 3909 |
| HincII | GTYRAC | 9 cut(s) | 401, 530, 758, 928, 1130, 1335, 2660, 3951, 4236 |
| HindII | GTYRAC | 9 cut(s) | 401, 530, 758, 928, 1130, 1335, 2660, 3951, 4236 |
| HindIII | AAGCTT | 4 cut(s) | 1074, 1683, 3015, 3810 |
| HpaI | GTTAAC | 3 cut(s) | 928, 3951, 4236 |
| HpaII | CCGG | 3 cut(s) | 831, 875, 1648 |
| Hpy99I | CGWCG | 1 cut(s) | 3933 |
| HpyCH4IV | ACGT | 5 cut(s) | 584, 2452, 2875, 4103, 4215 |
| HpySE526I | ACGT | 5 cut(s) | 584, 2452, 2875, 4103, 4215 |
| Hsp92I | GRCGYC | 1 cut(s) | 3909 |
| HspAI | GCGC | 4 cut(s) | 751, 2066, 3659, 3909 |
| KasI | GGCGCC | 1 cut(s) | 3908 |
| KpnI | GGTACC | 1 cut(s) | 2227 |
| KroI | GCCGGC | 1 cut(s) | 1647 |
| KroNI | GCCGGC | 1 cut(s) | 1649 |
| KspAI | GTTAAC | 3 cut(s) | 928, 3951, 4236 |
| LmnI | GCTCC | 5 cut(s) | 53, 1420, 2416, 2921, 3562 |
| Lsp1109I | GCAGC | 9 cut(s) | 897, 1154, 1342, 1493, 1528, 2546, 3047, 3260, 4328 |
| MaeI | CTAG | 9 cut(s) | 395, 1643, 1800, 1923, 2031, 2495, 2790, 4049, 4396 |
| MaeII | ACGT | 5 cut(s) | 584, 2452, 2875, 4103, 4215 |
| MfeI | CAATTG | 2 cut(s) | 1985, 2462 |
| MflI | RGATCY | 6 cut(s) | 311, 2423, 2476, 3648, 4271, 4392 |
| MhlI | GDGCHC | 3 cut(s) | 250, 1631, 1981 |
| MlsI | TGGCCA | 3 cut(s) | 1274, 2706, 3437 |
| MluNI | TGGCCA | 3 cut(s) | 1274, 2706, 3437 |
| Mly113I | GGCGCC | 1 cut(s) | 3909 |
| MlyI | GAGTC | 2 cut(s) | 1591, 3848 |
| MmeI | TCCRAC | 4 cut(s) | 700, 1264, 1543, 1549 |
| Mox20I | TGGCCA | 3 cut(s) | 1274, 2706, 3437 |
| Mph1103I | ATGCAT | 4 cut(s) | 181, 1103, 1713, 4229 |
| MroNI | GCCGGC | 1 cut(s) | 1647 |
| MroXI | GAANNNNTTC | 5 cut(s) | 663, 1296, 4215, 4227, 4363 |
| MscI | TGGCCA | 3 cut(s) | 1274, 2706, 3437 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1455, 4119, 4184 |
| Msp20I | TGGCCA | 3 cut(s) | 1274, 2706, 3437 |
| MspA1I | CMGCKG | 1 cut(s) | 3038 |
| MspCI | CTTAAG | 2 cut(s) | 2081, 2399 |
| MspI | CCGG | 3 cut(s) | 831, 875, 1648 |
| MunI | CAATTG | 2 cut(s) | 1985, 2462 |
| Mva1269I | GAATGC | 4 cut(s) | 87, 1257, 4227, 4229 |
| MvnI | CGCG | 1 cut(s) | 753 |
| NaeI | GCCGGC | 1 cut(s) | 1649 |
| NarI | GGCGCC | 1 cut(s) | 3909 |
| NcoI | CCATGG | 1 cut(s) | 3843 |
| NdeI | CATATG | 1 cut(s) | 3901 |
| NgoMIV | GCCGGC | 1 cut(s) | 1647 |
| NmeAIII | GCCGAG | 1 cut(s) | 1960 |
| NmuCI | GTSAC | 5 cut(s) | 1967, 2519, 2593, 3452, 3599 |
| NsiI | ATGCAT | 4 cut(s) | 181, 1103, 1713, 4229 |
| NspI | RCATGY | 4 cut(s) | 2982, 3003, 3035, 3635 |
| OliI | CACNNNNGTG | 1 cut(s) | 4119 |
| PaeI | GCATGC | 3 cut(s) | 3003, 3035, 3635 |
| PagI | TCATGA | 2 cut(s) | 3055, 4030 |
| PaqCI | CACCTGC | 1 cut(s) | 1490 |
| PasI | CCCWGGG | 2 cut(s) | 959, 2073 |
| PceI | AGGCCT | 5 cut(s) | 90, 128, 1444, 1798, 1921 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1672 |
| PctI | GAATGC | 4 cut(s) | 87, 1257, 4227, 4229 |
| PdiI | GCCGGC | 1 cut(s) | 1649 |
| PdmI | GAANNNNTTC | 5 cut(s) | 663, 1296, 4215, 4227, 4363 |
| PfoI | TCCNGGA | 1 cut(s) | 775 |
| PinAI | ACCGGT | 2 cut(s) | 830, 874 |
| PkrI | GCNGC | 9 cut(s) | 887, 1144, 1357, 1483, 1543, 2561, 3037, 3250, 4318 |
| PleI | GAGTC | 2 cut(s) | 1590, 3847 |
| PluTI | GGCGCC | 1 cut(s) | 3912 |
| PpsI | GAGTC | 2 cut(s) | 1590, 3847 |
| Ppu21I | YACGTR | 1 cut(s) | 2453 |
| PpuMI | RGGWCCY | 3 cut(s) | 2077, 2923, 3527 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3525 |
| PshBI | ATTAAT | 1 cut(s) | 3297 |
| PsiI | TTATAA | 1 cut(s) | 3885 |
| Psp124BI | GAGCTC | 1 cut(s) | 1631 |
| Psp1406I | AACGTT | 1 cut(s) | 4215 |
| Psp5II | RGGWCCY | 3 cut(s) | 2077, 2923, 3527 |
| PspFI | CCCAGC | 2 cut(s) | 2324, 3186 |
| PspPI | GGNCC | 8 cut(s) | 64, 509, 836, 2077, 2923, 3527, 3789, 4189 |
| PspPPI | RGGWCCY | 3 cut(s) | 2077, 2923, 3527 |
| PstI | CTGCAG | 3 cut(s) | 738, 1483, 2291 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2559, 2807, 3083 |
| PsuI | RGATCY | 6 cut(s) | 311, 2423, 2476, 3648, 4271, 4392 |
| PvuII | CAGCTG | 1 cut(s) | 3038 |
| RigI | GGCCGGCC | 1 cut(s) | 1651 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1455, 4119, 4184 |
| SacI | GAGCTC | 1 cut(s) | 1631 |
| SalI | GTCGAC | 5 cut(s) | 399, 528, 756, 1128, 1333 |
| SatI | GCNGC | 9 cut(s) | 886, 1143, 1356, 1482, 1542, 2560, 3036, 3249, 4317 |
| Sau96I | GGNCC | 8 cut(s) | 64, 509, 836, 2077, 2923, 3527, 3789, 4189 |
| ScaI | AGTACT | 2 cut(s) | 1704, 3234 |
| SchI | GAGTC | 2 cut(s) | 1591, 3848 |
| SduI | GDGCHC | 3 cut(s) | 250, 1631, 1981 |
| SfcI | CTRYAG | 4 cut(s) | 734, 1479, 2060, 2287 |
| SfoI | GGCGCC | 1 cut(s) | 3910 |
| SgrAI | CRCCGGYG | 1 cut(s) | 830 |
| SinI | GGWCC | 5 cut(s) | 836, 2077, 2923, 3527, 3789 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1455, 4119, 4184 |
| SmlI | CTYRAG | 5 cut(s) | 249, 2081, 2300, 2399, 2964 |
| SmoI | CTYRAG | 5 cut(s) | 249, 2081, 2300, 2399, 2964 |
| SphI | GCATGC | 3 cut(s) | 3003, 3035, 3635 |
| SseBI | AGGCCT | 5 cut(s) | 90, 128, 1444, 1798, 1921 |
| SsiI | CCGC | 3 cut(s) | 72, 753, 3614 |
| SspDI | GGCGCC | 1 cut(s) | 3908 |
| SspI | AATATT | 2 cut(s) | 2350, 3301 |
| SspMI | CTAG | 9 cut(s) | 395, 1643, 1800, 1923, 2031, 2495, 2790, 4049, 4396 |
| SstI | GAGCTC | 1 cut(s) | 1631 |
| StuI | AGGCCT | 5 cut(s) | 90, 128, 1444, 1798, 1921 |
| StyI | CCWWGG | 6 cut(s) | 67, 3413, 3784, 3843, 4097, 4117 |
| TaiI | ACGT | 5 cut(s) | 587, 2455, 2878, 4106, 4218 |
| TaqI | TCGA | 9 cut(s) | 257, 400, 529, 757, 1129, 1334, 1537, 2509, 4194 |
| TaqII | GACCGA | 1 cut(s) | 3806 |
| TatI | WGTACW | 7 cut(s) | 1702, 2458, 2514, 2677, 3085, 3160, 3232 |
| TscAI | CASTG | 7 cut(s) | 355, 1849, 1972, 2144, 2644, 3131, 4314 |
| TseFI | GTSAC | 5 cut(s) | 1967, 2519, 2593, 3452, 3599 |
| TseI | GCWGC | 9 cut(s) | 885, 1142, 1355, 1481, 1541, 2559, 3035, 3248, 4316 |
| Tsp45I | GTSAC | 5 cut(s) | 1967, 2519, 2593, 3452, 3599 |
| TspGWI | ACGGA | 5 cut(s) | 956, 1841, 1964, 2161, 3917 |
| TspRI | CASTG | 7 cut(s) | 355, 1849, 1972, 2144, 2644, 3131, 4314 |
| Vha464I | CTTAAG | 2 cut(s) | 2081, 2399 |
| VpaK11BI | GGWCC | 5 cut(s) | 836, 2077, 2923, 3527, 3789 |
| VspI | ATTAAT | 1 cut(s) | 3297 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 2084, 2303, 4121 |
| XapI | RAATTY | 5 cut(s) | 1847, 1892, 3428, 3775, 3980 |
| XbaI | TCTAGA | 1 cut(s) | 4048 |
| XceI | RCATGY | 4 cut(s) | 2982, 3003, 3035, 3635 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3201 |
| XmiI | GTMKAC | 6 cut(s) | 400, 529, 757, 1129, 1334, 2449 |
| XmnI | GAANNNNTTC | 5 cut(s) | 663, 1296, 4215, 4227, 4363 |
| XspI | CTAG | 9 cut(s) | 395, 1643, 1800, 1923, 2031, 2495, 2790, 4049, 4396 |
| ZrmI | AGTACT | 2 cut(s) | 1704, 3234 |
| Zsp2I | ATGCAT | 4 cut(s) | 181, 1103, 1713, 4229 |