Rw1G038890
ERF Family

A domain family that is part of the cupin metalloenzyme superfamily.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0001331
Physical Location & Seq
Forward (+)
66444436 .. 66450409
5974 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G038890.1

Sequence Viewer

Length: 2412 bp
ATGAATCACAGTGACTTCCGTGCTCGGCAATTGAAGAACTCAGAACATACTGACCAAAAAGTCTGTAAGAGACCTAGAGGGAGACCCAGGAAGTTTAGCAACCTACAGGCGCATCCCAGGGACCTTAAGCAGGGAATATCTACTGATACATTGGAGAGAAAGGAAAGTTTATGGTGCCACCAGTGCTTACGGAATGACAGAAATGGTGTTGTCATTTGTTTAAATTGCAGAAAGAAACGCTATTGCTATGACTGCCTGGCAAAGTGGTACCCCGAGAAGACAAAAGAGGACATAGAGATTGCTTGTCCTTATTGTCGTGGGAACTGCAACTGCAGAATATGCCTCAAGGAGGATTTAGTTGTGATGGCTGGGCATGAAGAAACAGATACGAATATTAAATTGGAAAAGTTGCTTTACTTGCTGTGCAAAACTCTGTCTCTCCTTAAGCATATTCAACAGGAGCAGAGATCTGAATTAGAAGCAGAAAGCTGTATACGTGGTGTACAATTGACAGAAGAGGACCTCACGAGGTCTATACTAGAGGATGATGATCGAGTGTACTGTGACAAATGCAATACATCCATTGTCAATTTCCACAGAAGCTGCCCCAATCCTGATTGTTCTTATGATCTCTGTGTCACTTGTTGTTGGGAACTAAGGAAAGGATGTCATCTTGGAGGCAGTGAAGCGGAATCTTCTGGTCAACAGTTTTGTGAAGGAGTACACAGTAAAGGTACAGTATCAGATGGCCAGGTTCCTGAAAATGTGAATGGAAATATATTACAGAGCGTACCAGTAAATGAGTTCACAAATGATATATCTTCCAAGTTTCCTAGTTGGAAAGCAGAGGCTGATGGTAGGATTCCTTGTCCACCAAAAGCACTGGGAGGTTGTGGTACCCAGTTACTTGAACTCAGACGTATATTTGAAGCAGACTGGGTTGAAAAACTAATTTTCAGCTCAGAGGACCTCACTGTTCATTATCAACCATCAGATGTTGATTTTTCTCAAGGATGTTCTGCATGTCATTCTATCAGTTCTGCATGCAATGGTGTAAAAGCTTCCGAAGTGAGGCATGCAGCTGATAGACTGAACTGTCATGATAACTTCCTTTACTGCCCGGATTCTGTACATTTGGGAAACGATGGCATTGAGCATTTTCAATTGCACTGGAGGAGAGGGGAACCAGTTGTAGTTAGAAATGTACTTGAAAAGGCTACTGGCCTTAGCTGGGAACCAATGGTAATGTGGAGGGCTTTTATTGGGGCAAAAAAAGTACTGAAAGAGGAGGCAGCGAAGGTCAAAGCCATTGATTGCCTTGATTGGTGCGAGGTTGAGATTAATATTTTTCAGTTCTTTAAGGGCTATATAGAGGGTCGTAAATACACTAATGGGTGGCCTGAGATGTTGAAGCTGAAGGATTGGCCTCCATCAAATCTCTTTGAAGAGTGTTTGCCAAGGCACGGTGCTGAATTTATGGCCATGCTGCCCTTTAGTGACTATACCCATCCCAAATCAGGTGTTCTAAATCTTGCAACAAGGCTTCCTATGTCTTTGAAGCCAGACTTGGGTCCTAAGACATACATCGCTTATGGTACTATGGAGGAGCTTGGTAGAGGAGATTCAGTAACGAAACTGCATTGTGACATCTCTGATGCAGTTAATGTGCTGACTCATGCAACTGAAGTAAAGATCCCTCCAGGGCAGGGTAAAATCATTGACAGATTACAGAAGAAATATGAAGCTGAAGATGAAATAATTGAAGGAACTTCATGTAATGACGAACACTTTGAGCCTTCTAATGTAACACAAGACGTGAATTTGGTCCTTGGGACCGATCCCTCGCAGCAAAAAACTTCAGGAAATCTTATCAACAGAAAAGAGTCCATGGAGAGTTCAGATTCAATTAGAAGTAGTCAAAGTGATTATAAATCAGACGTTGCATATGGAGGCGCCGTTTGGGACATTTTCCGTCGGCAAGATGTACCCAAGTTAACAGAATACCTGTTAAAGCATCAGAAAGAATTTCGCCACATTAGTAATCTTCCTGTGAAATCTGTTACCCATCCTATTCATGACCAGACCCTTTATCTAGATGAGAAGCATAAAAAAAAGCTGAAGGAAGAGTTTGGTGTTGAACCTTGGACGTTTGAGCAACACCTTGGTGAGGCTGTTTTCATTCCTGCTGGATGCCCACATCAAGTGAGAAATAGACAGTCGTGCATTAAAGTGGCCCTCGATTTTGTTTCCCCTGAAAACGTTCAAGAATGCATTCGGTTAACAGAGGAGTTTCGCTTGCTTCCAGAAAACCATAGATCCAGGGAAGATAAACTGGAGGTGAAGAAGATGGCACTGTATGCGGCAAGTGATGCTATAAGTGAAGCTGAAACTCTGAAGTCAAGAATCAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC WRC zf-4CXXC_R1

Protein Analysis

803

Amino Acids

91.52

Weight (kDa)

6.12

Isoelectric Point (pI)

49.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-4CXXC_R1 PF10497 54 - 122 1e-07 Zinc-finger domain of monoamine-oxidase A repressor R1
JmjC PF02373 638 - 748 1.1e-15 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1929
AasI GACNNNNNNGTC 2 cut(s) 59, 1095
Acc65I GGTACC 2 cut(s) 267, 896
AccB1I GGYRCC 4 cut(s) 174, 267, 896, 1952
AccI GTMKAC 1 cut(s) 493
AciI CCGC 2 cut(s) 689, 2360
AclI AACGTT 1 cut(s) 2259
AclWI GGATC 3 cut(s) 1687, 1832, 2310
AcoI YGGCCR 2 cut(s) 748, 1479
AcsI RAATTY 3 cut(s) 1472, 1819, 2024
AcuI CTGAAG 5 cut(s) 1436, 1704, 1767, 1842, 2138
AcyI GRCGYC 1 cut(s) 1953
AfiI CCNNNNNNNGG 9 cut(s) 130, 349, 1071, 1231, 1463, 1517, 1568, 1706, 2167
AflII CTTAAG 2 cut(s) 125, 443
AjiI CACGTC 1 cut(s) 1816
AjnI CCWGG 6 cut(s) 86, 116, 255, 750, 1699, 2318
AjuI GAANNNNNNNTTGG 4 cut(s) 383, 415, 1550, 1582
AleI CACNNNNGTG 1 cut(s) 2163
Alw21I GWGCWC 1 cut(s) 25
Alw26I GTCTC 3 cut(s) 64, 76, 441
AlwI GGATC 3 cut(s) 1687, 1832, 2310
AlwNI CAGNNNCTG 2 cut(s) 603, 851
Ama87I CYCGRG 1 cut(s) 272
AoxI GGCC 6 cut(s) 748, 1222, 1397, 1424, 1479, 2232
ApeKI GCWGC 5 cut(s) 603, 1079, 1292, 1486, 1846
ApoI RAATTY 3 cut(s) 1472, 1819, 2024
ArsI GACNNNNNNTTYG 2 cut(s) 1772, 1804
AseI ATTAAT 1 cut(s) 1341
Asp700I GAANNNNTTC 2 cut(s) 2259, 2271
Asp718I GGTACC 2 cut(s) 267, 896
AspLEI GCGC 2 cut(s) 112, 1955
AspS9I GGNCC 7 cut(s) 121, 520, 967, 1571, 1825, 1833, 2233
AsuC2I CCSGG 1 cut(s) 1121
AsuHPI GGTGA 2 cut(s) 2177, 2350
AvaI CYCGRG 1 cut(s) 272
AvaII GGWCC 6 cut(s) 121, 520, 967, 1571, 1825, 1833
BalI TGGCCA 2 cut(s) 750, 1481
BanI GGYRCC 4 cut(s) 174, 267, 896, 1952
BauI CACGAG 1 cut(s) 526
BbsI GAAGAC 1 cut(s) 284
Bbv12I GWGCWC 1 cut(s) 25
BbvI GCAGC 5 cut(s) 590, 1091, 1304, 1473, 1858
BccI CCATC 9 cut(s) 358, 740, 848, 997, 1139, 1438, 1515, 2073, 2341
BceAI ACGGC 1 cut(s) 1940
BciT130I CCWGG 6 cut(s) 88, 118, 257, 752, 1701, 2320
BcnI CCSGG 1 cut(s) 1121
BcoDI GTCTC 3 cut(s) 64, 76, 441
BfaI CTAG 4 cut(s) 75, 539, 834, 2093
BfmI CTRYAG 2 cut(s) 104, 331
BfoI RGCGCY 1 cut(s) 1956
BfrI CTTAAG 2 cut(s) 125, 443
BglII AGATCT 1 cut(s) 467
BisI GCNGC 6 cut(s) 604, 1080, 1293, 1487, 1847, 2361
BlsI GCNGC 6 cut(s) 605, 1081, 1294, 1488, 1848, 2362
BmcAI AGTACT 1 cut(s) 1278
Bme1390I CCNGG 7 cut(s) 88, 118, 257, 752, 1121, 1701, 2320
Bme18I GGWCC 6 cut(s) 121, 520, 967, 1571, 1825, 1833
BmeT110I CYCGRG 1 cut(s) 272
BmgBI CACGTC 1 cut(s) 1816
BmgT120I GGNCC 7 cut(s) 121, 520, 967, 1571, 1825, 1833, 2233
BmrFI CCNGG 7 cut(s) 88, 118, 257, 752, 1121, 1701, 2320
BmrI ACTGGG 3 cut(s) 893, 895, 946
BmsI GCATC 5 cut(s) 121, 1645, 2023, 2180, 2359
BmuI ACTGGG 3 cut(s) 893, 895, 946
BoxI GACNNNNGTC 1 cut(s) 1569
BpiI GAAGAC 1 cut(s) 284
BpmI CTGGAG 3 cut(s) 1192, 1683, 2354
Bpu10I CCTNAGC 1 cut(s) 1226
BpuEI CTTGAG 2 cut(s) 329, 993
BpuMI CCSGG 1 cut(s) 1121
BsaAI YACGTR 1 cut(s) 497
BsaBI GATNNNNATC 1 cut(s) 549
BsaHI GRCGYC 1 cut(s) 1953
BsaI GGTCTC 2 cut(s) 64, 76
BsaXI ACNNNNNCTCC 4 cut(s) 1611, 1641, 1941, 1971
Bsc4I CCNNNNNNNGG 9 cut(s) 130, 349, 1071, 1231, 1463, 1517, 1568, 1706, 2167
Bse1I ACTGG 9 cut(s) 181, 794, 888, 901, 941, 1175, 1187, 1225, 2337
Bse3DI GCAATG 1 cut(s) 1054
Bse8I GATNNNNATC 1 cut(s) 549
BseBI CCWGG 6 cut(s) 88, 118, 257, 752, 1701, 2320
BseGI GGATG 8 cut(s) 112, 550, 578, 671, 1019, 1507, 2065, 2195
BseJI GATNNNNATC 1 cut(s) 549
BseLI CCNNNNNNNGG 9 cut(s) 130, 349, 1071, 1231, 1463, 1517, 1568, 1706, 2167
BseMI GCAATG 1 cut(s) 1054
BseMII CTCAG 4 cut(s) 54, 928, 975, 1392
BseNI ACTGG 9 cut(s) 181, 794, 888, 901, 941, 1175, 1187, 1225, 2337
BseRI GAGGAG 5 cut(s) 1189, 1301, 1619, 1632, 2300
BseXI GCAGC 5 cut(s) 590, 1091, 1304, 1473, 1858
BseYI CCCAGC 2 cut(s) 368, 1230
BshFI GGCC 6 cut(s) 750, 1224, 1399, 1426, 1481, 2234
BshNI GGYRCC 4 cut(s) 174, 267, 896, 1952
BsiHKAI GWGCWC 1 cut(s) 25
BsiHKCI CYCGRG 1 cut(s) 272
BsiSI CCGG 1 cut(s) 1121
BslFI GGGAC 3 cut(s) 134, 1846, 1976
BslI CCNNNNNNNGG 9 cut(s) 130, 349, 1071, 1231, 1463, 1517, 1568, 1706, 2167
BsmAI GTCTC 3 cut(s) 64, 76, 441
BsmFI GGGAC 3 cut(s) 134, 1846, 1976
BsmI GAATGC 2 cut(s) 2271, 2273
BsnI GGCC 6 cut(s) 750, 1224, 1399, 1426, 1481, 2234
Bso31I GGTCTC 2 cut(s) 64, 76
BsoBI CYCGRG 1 cut(s) 272
Bsp1286I GDGCHC 1 cut(s) 25
Bsp1407I TGTACA 2 cut(s) 502, 1129
Bsp143I GATC 6 cut(s) 467, 550, 628, 1692, 1837, 2315
Bsp19I CCATGG 1 cut(s) 1887
BspACI CCGC 2 cut(s) 689, 2360
BspANI GGCC 6 cut(s) 750, 1224, 1399, 1426, 1481, 2234
BspCNI CTCAG 4 cut(s) 53, 927, 974, 1393
BspHI TCATGA 2 cut(s) 1099, 2074
BspMAI CTGCAG 1 cut(s) 335
BspPI GGATC 3 cut(s) 1687, 1832, 2310
BspT107I GGYRCC 4 cut(s) 174, 267, 896, 1952
BspTI CTTAAG 2 cut(s) 125, 443
BspTNI GGTCTC 2 cut(s) 64, 76
BsrDI GCAATG 1 cut(s) 1054
BsrGI TGTACA 2 cut(s) 502, 1129
BsrI ACTGG 9 cut(s) 181, 794, 888, 901, 941, 1175, 1187, 1225, 2337
BssMI GATC 6 cut(s) 467, 550, 628, 1692, 1837, 2315
BssNAI GTATAC 1 cut(s) 494
BssNI GRCGYC 1 cut(s) 1953
BssSI CACGAG 1 cut(s) 526
BssT1I CCWWGG 5 cut(s) 1457, 1828, 1887, 2141, 2161
Bst1107I GTATAC 1 cut(s) 494
Bst2BI CACGAG 1 cut(s) 526
Bst2UI CCWGG 6 cut(s) 88, 118, 257, 752, 1701, 2320
Bst6I CTCTTC 3 cut(s) 510, 1440, 2118
BstACI GRCGYC 1 cut(s) 1953
BstAFI CTTAAG 2 cut(s) 125, 443
BstAPI GCANNNNNTGC 3 cut(s) 339, 2357, 2369
BstAUI TGTACA 2 cut(s) 502, 1129
BstBAI YACGTR 1 cut(s) 497
BstC8I GCNNGC 3 cut(s) 1045, 1077, 2297
BstDEI CTNAG 7 cut(s) 40, 656, 914, 961, 1226, 1401, 1575
BstDSI CCRYGG 1 cut(s) 1887
BstENI CCTNNNNNAGG 3 cut(s) 128, 347, 2165
BstF5I GGATG 8 cut(s) 112, 550, 578, 671, 1019, 1507, 2065, 2195
BstH2I RGCGCY 1 cut(s) 1956
BstHHI GCGC 2 cut(s) 112, 1955
BstKTI GATC 6 cut(s) 470, 553, 631, 1695, 1840, 2318
BstMAI GTCTC 3 cut(s) 64, 76, 441
BstMBI GATC 6 cut(s) 467, 550, 628, 1692, 1837, 2315
BstMWI GCNNNNNNNGC 6 cut(s) 183, 252, 339, 418, 2357, 2369
BstNI CCWGG 6 cut(s) 88, 118, 257, 752, 1701, 2320
BstNSI RCATGY 3 cut(s) 1026, 1047, 1079
BstPAI GACNNNNGTC 1 cut(s) 1569
BstSCI CCNGG 7 cut(s) 86, 116, 255, 750, 1119, 1699, 2318
BstSFI CTRYAG 2 cut(s) 104, 331
BstV1I GCAGC 5 cut(s) 590, 1091, 1304, 1473, 1858
BstV2I GAAGAC 1 cut(s) 284
BstX2I RGATCY 3 cut(s) 467, 1692, 2315
BstYI RGATCY 3 cut(s) 467, 1692, 2315
BstZ17I GTATAC 1 cut(s) 494
BsuRI GGCC 6 cut(s) 750, 1224, 1399, 1426, 1481, 2234
BtgI CCRYGG 1 cut(s) 1887
BtgZI GCGATG 1 cut(s) 1570
BtrI CACGTC 1 cut(s) 1816
BtsCI GGATG 8 cut(s) 112, 550, 578, 671, 1019, 1507, 2065, 2195
BtsI GCAGTG 1 cut(s) 688
BtsIMutI CAGTG 7 cut(s) 16, 188, 688, 881, 972, 1168, 2351
Cac8I GCNNGC 3 cut(s) 1045, 1077, 2297
CaiI CAGNNNCTG 2 cut(s) 603, 851
CciI TCATGA 2 cut(s) 1099, 2074
CfoI GCGC 2 cut(s) 112, 1955
Cfr13I GGNCC 7 cut(s) 121, 520, 967, 1571, 1825, 1833, 2233
DdeI CTNAG 7 cut(s) 40, 656, 914, 961, 1226, 1401, 1575
DinI GGCGCC 1 cut(s) 1954
DpnI GATC 6 cut(s) 469, 552, 630, 1694, 1839, 2317
DpnII GATC 6 cut(s) 467, 550, 628, 1692, 1837, 2315
DraI TTTAAA 1 cut(s) 222
DrdI GACNNNNNNGTC 2 cut(s) 59, 1095
DseDI GACNNNNNNGTC 2 cut(s) 59, 1095
EaeI YGGCCR 2 cut(s) 748, 1479
Eam1104I CTCTTC 3 cut(s) 510, 1440, 2118
EarI CTCTTC 3 cut(s) 510, 1440, 2118
Eco130I CCWWGG 5 cut(s) 1457, 1828, 1887, 2141, 2161
Eco31I GGTCTC 2 cut(s) 64, 76
Eco47I GGWCC 6 cut(s) 121, 520, 967, 1571, 1825, 1833
Eco57I CTGAAG 5 cut(s) 1436, 1704, 1767, 1842, 2138
Eco88I CYCGRG 1 cut(s) 272
EcoNI CCTNNNNNAGG 3 cut(s) 128, 347, 2165
EcoO109I RGGNCCY 4 cut(s) 121, 520, 967, 1571
EcoRII CCWGG 6 cut(s) 86, 116, 255, 750, 1699, 2318
EcoT14I CCWWGG 5 cut(s) 1457, 1828, 1887, 2141, 2161
EcoT22I ATGCAT 1 cut(s) 2273
EgeI GGCGCC 1 cut(s) 1954
EheI GGCGCC 1 cut(s) 1954
ErhI CCWWGG 5 cut(s) 1457, 1828, 1887, 2141, 2161
FalI AAGNNNNNCTT 2 cut(s) 1550, 1582
FaqI GGGAC 3 cut(s) 134, 1846, 1976
FauNDI CATATG 1 cut(s) 1945
FblI GTMKAC 1 cut(s) 493
Fnu4HI GCNGC 6 cut(s) 604, 1080, 1293, 1487, 1847, 2361
FokI GGATG 8 cut(s) 99, 557, 565, 678, 1026, 1494, 2052, 2202
Fsp4HI GCNGC 6 cut(s) 604, 1080, 1293, 1487, 1847, 2361
FspBI CTAG 4 cut(s) 75, 539, 834, 2093
GlaI GCGC 2 cut(s) 111, 1954
GluI GCNGC 6 cut(s) 604, 1080, 1293, 1487, 1847, 2361
GsaI CCCAGC 2 cut(s) 372, 1234
GsuI CTGGAG 3 cut(s) 1192, 1683, 2354
HaeII RGCGCY 1 cut(s) 1956
HaeIII GGCC 6 cut(s) 750, 1224, 1399, 1426, 1481, 2234
HapII CCGG 1 cut(s) 1121
HhaI GCGC 2 cut(s) 112, 1955
Hin1I GRCGYC 1 cut(s) 1953
Hin6I GCGC 2 cut(s) 110, 1953
HinP1I GCGC 2 cut(s) 110, 1953
HincII GTYRAC 3 cut(s) 704, 1995, 2280
HindII GTYRAC 3 cut(s) 704, 1995, 2280
HindIII AAGCTT 1 cut(s) 1059
HinfI GANTC 9 cut(s) 4, 692, 862, 1124, 1622, 1672, 1883, 1901, 2403
HpaI GTTAAC 2 cut(s) 1995, 2280
HpaII CCGG 1 cut(s) 1121
HphI GGTGA 2 cut(s) 2177, 2350
Hpy166II GTNNAC 9 cut(s) 494, 503, 559, 704, 724, 807, 872, 1995, 2280
Hpy8I GTNNAC 9 cut(s) 494, 503, 559, 704, 724, 807, 872, 1995, 2280
Hpy99I CGWCG 1 cut(s) 1977
HpyAV CCTTC 6 cut(s) 710, 1291, 1411, 1757, 1806, 2113
HpyCH4IV ACGT 6 cut(s) 496, 919, 1815, 1938, 2147, 2259
HpyF10VI GCNNNNNNNGC 6 cut(s) 183, 252, 339, 418, 2357, 2369
HpyF3I CTNAG 7 cut(s) 40, 656, 914, 961, 1226, 1401, 1575
HpySE526I ACGT 6 cut(s) 496, 919, 1815, 1938, 2147, 2259
Hsp92I GRCGYC 1 cut(s) 1953
HspAI GCGC 2 cut(s) 110, 1953
KasI GGCGCC 1 cut(s) 1952
KpnI GGTACC 2 cut(s) 271, 900
KspAI GTTAAC 2 cut(s) 1995, 2280
Kzo9I GATC 6 cut(s) 467, 550, 628, 1692, 1837, 2315
LmnI GCTCC 2 cut(s) 460, 1606
Lsp1109I GCAGC 5 cut(s) 590, 1091, 1304, 1473, 1858
LweI GCATC 5 cut(s) 121, 1645, 2023, 2180, 2359
MaeI CTAG 4 cut(s) 75, 539, 834, 2093
MaeII ACGT 6 cut(s) 496, 919, 1815, 1938, 2147, 2259
MaeIII GTNAC 9 cut(s) 11, 563, 637, 903, 1496, 1627, 1643, 1804, 2059
MalI GATC 6 cut(s) 469, 552, 630, 1694, 1839, 2317
MboI GATC 6 cut(s) 467, 550, 628, 1692, 1837, 2315
MfeI CAATTG 3 cut(s) 29, 506, 1163
MflI RGATCY 3 cut(s) 467, 1692, 2315
MhlI GDGCHC 1 cut(s) 25
MlsI TGGCCA 2 cut(s) 750, 1481
MluNI TGGCCA 2 cut(s) 750, 1481
Mly113I GGCGCC 1 cut(s) 1953
MlyI GAGTC 2 cut(s) 1666, 1892
MmeI TCCRAC 1 cut(s) 818
Mox20I TGGCCA 2 cut(s) 750, 1481
Mph1103I ATGCAT 1 cut(s) 2273
MroXI GAANNNNTTC 2 cut(s) 2259, 2271
MscI TGGCCA 2 cut(s) 750, 1481
MslI CAYNNNNRTG 2 cut(s) 2163, 2228
Msp20I TGGCCA 2 cut(s) 750, 1481
MspA1I CMGCKG 1 cut(s) 1082
MspCI CTTAAG 2 cut(s) 125, 443
MspI CCGG 1 cut(s) 1121
MspR9I CCNGG 7 cut(s) 88, 118, 257, 752, 1121, 1701, 2320
MunI CAATTG 3 cut(s) 29, 506, 1163
Mva1269I GAATGC 2 cut(s) 2271, 2273
MvaI CCWGG 6 cut(s) 88, 118, 257, 752, 1701, 2320
MwoI GCNNNNNNNGC 6 cut(s) 183, 252, 339, 418, 2357, 2369
NarI GGCGCC 1 cut(s) 1953
NciI CCSGG 1 cut(s) 1121
NcoI CCATGG 1 cut(s) 1887
NdeI CATATG 1 cut(s) 1945
NdeII GATC 6 cut(s) 467, 550, 628, 1692, 1837, 2315
NmeAIII GCCGAG 1 cut(s) 4
NmuCI GTSAC 5 cut(s) 11, 563, 637, 1496, 1643
NsiI ATGCAT 1 cut(s) 2273
NspI RCATGY 3 cut(s) 1026, 1047, 1079
OliI CACNNNNGTG 1 cut(s) 2163
PaeI GCATGC 2 cut(s) 1047, 1079
PagI TCATGA 2 cut(s) 1099, 2074
PasI CCCWGGG 1 cut(s) 117
PctI GAATGC 2 cut(s) 2271, 2273
PdmI GAANNNNTTC 2 cut(s) 2259, 2271
PfeI GAWTC 7 cut(s) 4, 692, 862, 1124, 1622, 1901, 2403
PkrI GCNGC 6 cut(s) 605, 1081, 1294, 1488, 1848, 2362
PleI GAGTC 2 cut(s) 1666, 1891
PluTI GGCGCC 1 cut(s) 1956
PpsI GAGTC 2 cut(s) 1666, 1891
Ppu21I YACGTR 1 cut(s) 497
PpuMI RGGWCCY 4 cut(s) 121, 520, 967, 1571
PshAI GACNNNNGTC 1 cut(s) 1569
PshBI ATTAAT 1 cut(s) 1341
PsiI TTATAA 1 cut(s) 1929
Psp1406I AACGTT 1 cut(s) 2259
Psp5II RGGWCCY 4 cut(s) 121, 520, 967, 1571
Psp6I CCWGG 6 cut(s) 86, 116, 255, 750, 1699, 2318
PspFI CCCAGC 2 cut(s) 368, 1230
PspGI CCWGG 6 cut(s) 86, 116, 255, 750, 1699, 2318
PspPI GGNCC 7 cut(s) 121, 520, 967, 1571, 1825, 1833, 2233
PspPPI RGGWCCY 4 cut(s) 121, 520, 967, 1571
PstI CTGCAG 1 cut(s) 335
PstNI CAGNNNCTG 2 cut(s) 603, 851
PsuI RGATCY 3 cut(s) 467, 1692, 2315
PvuII CAGCTG 1 cut(s) 1082
RseI CAYNNNNRTG 2 cut(s) 2163, 2228
SatI GCNGC 6 cut(s) 604, 1080, 1293, 1487, 1847, 2361
Sau3AI GATC 6 cut(s) 467, 550, 628, 1692, 1837, 2315
Sau96I GGNCC 7 cut(s) 121, 520, 967, 1571, 1825, 1833, 2233
ScaI AGTACT 1 cut(s) 1278
SchI GAGTC 2 cut(s) 1666, 1892
ScrFI CCNGG 7 cut(s) 88, 118, 257, 752, 1121, 1701, 2320
SduI GDGCHC 1 cut(s) 25
SfaNI GCATC 5 cut(s) 121, 1645, 2023, 2180, 2359
SfcI CTRYAG 2 cut(s) 104, 331
SfoI GGCGCC 1 cut(s) 1954
SinI GGWCC 6 cut(s) 121, 520, 967, 1571, 1825, 1833
SmiMI CAYNNNNRTG 2 cut(s) 2163, 2228
SmlI CTYRAG 4 cut(s) 125, 344, 443, 1008
SmoI CTYRAG 4 cut(s) 125, 344, 443, 1008
SphI GCATGC 2 cut(s) 1047, 1079
SsiI CCGC 2 cut(s) 689, 2360
SspDI GGCGCC 1 cut(s) 1952
SspI AATATT 2 cut(s) 394, 1345
SspMI CTAG 4 cut(s) 75, 539, 834, 2093
StyD4I CCNGG 7 cut(s) 86, 116, 255, 750, 1119, 1699, 2318
StyI CCWWGG 5 cut(s) 1457, 1828, 1887, 2141, 2161
TaiI ACGT 6 cut(s) 499, 922, 1818, 1941, 2150, 2262
TaqI TCGA 2 cut(s) 553, 2238
TaqII GACCGA 1 cut(s) 1850
TatI WGTACW 6 cut(s) 502, 558, 721, 1129, 1204, 1276
TauI GCSGC 1 cut(s) 2363
TfiI GAWTC 7 cut(s) 4, 692, 862, 1124, 1622, 1901, 2403
TscAI CASTG 7 cut(s) 16, 188, 688, 888, 979, 1175, 2358
TseFI GTSAC 5 cut(s) 11, 563, 637, 1496, 1643
TseI GCWGC 5 cut(s) 603, 1079, 1292, 1486, 1846
Tsp45I GTSAC 5 cut(s) 11, 563, 637, 1496, 1643
TspDTI ATGAA 8 cut(s) 17, 390, 968, 1755, 1761, 1767, 2063, 2167
TspGWI ACGGA 3 cut(s) 8, 205, 1961
TspRI CASTG 7 cut(s) 16, 188, 688, 888, 979, 1175, 2358
Vha464I CTTAAG 2 cut(s) 125, 443
VpaK11BI GGWCC 6 cut(s) 121, 520, 967, 1571, 1825, 1833
VspI ATTAAT 1 cut(s) 1341
XagI CCTNNNNNAGG 3 cut(s) 128, 347, 2165
XapI RAATTY 3 cut(s) 1472, 1819, 2024
XbaI TCTAGA 1 cut(s) 2092
XceI RCATGY 3 cut(s) 1026, 1047, 1079
XcmI CCANNNNNNNNNTGG 1 cut(s) 1245
XmiI GTMKAC 1 cut(s) 493
XmnI GAANNNNTTC 2 cut(s) 2259, 2271
XspI CTAG 4 cut(s) 75, 539, 834, 2093
ZrmI AGTACT 1 cut(s) 1278
Zsp2I ATGCAT 1 cut(s) 2273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.