A domain family that is part of the cupin metalloenzyme superfamily.
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-4CXXC_R1 | PF10497 | 841 - 909 | 2e-07 | Zinc-finger domain of monoamine-oxidase A repressor R1 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 4290, 4545 |
| AarI | CACCTGC | 1 cut(s) | 1895 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 909, 3456 |
| Acc36I | ACCTGC | 1 cut(s) | 1895 |
| Acc65I | GGTACC | 2 cut(s) | 2628, 3257 |
| AccB1I | GGYRCC | 5 cut(s) | 782, 2535, 2628, 3257, 4313 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1253 |
| AccI | GTMKAC | 6 cut(s) | 772, 1129, 1501, 1522, 1727, 2854 |
| AccII | CGCG | 1 cut(s) | 1125 |
| AciI | CCGC | 5 cut(s) | 89, 153, 165, 444, 1125 |
| AclWI | GGATC | 4 cut(s) | 129, 664, 4048, 4193 |
| AcoI | YGGCCR | 4 cut(s) | 1665, 1715, 3109, 3840 |
| AcsI | RAATTY | 8 cut(s) | 105, 345, 368, 2252, 2297, 3833, 4180, 4385 |
| AcuI | CTGAAG | 8 cut(s) | 708, 935, 2106, 3797, 4065, 4128, 4203, 4499 |
| AcyI | GRCGYC | 1 cut(s) | 4314 |
| AflII | CTTAAG | 2 cut(s) | 2486, 2804 |
| AgeI | ACCGGT | 1 cut(s) | 1202 |
| AjiI | CACGTC | 1 cut(s) | 4177 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2744, 2776, 3911, 3943 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1461, 1493, 2130, 2162 |
| Alw21I | GWGCWC | 4 cut(s) | 622, 2036, 2386, 2866 |
| Alw26I | GTCTC | 9 cut(s) | 957, 1235, 1951, 2062, 2206, 2329, 2425, 2437, 2802 |
| Alw44I | GTGCAC | 1 cut(s) | 2862 |
| AlwI | GGATC | 4 cut(s) | 129, 664, 4048, 4193 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2180, 2964, 3212 |
| Ama87I | CYCGRG | 1 cut(s) | 2633 |
| ApaLI | GTGCAC | 1 cut(s) | 2862 |
| ApeKI | GCWGC | 6 cut(s) | 1535, 1886, 1946, 2964, 3440, 3653 |
| ApoI | RAATTY | 8 cut(s) | 105, 345, 368, 2252, 2297, 3833, 4180, 4385 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 2061, 2065, 2093, 2097, 4133, 4165, 4166, 4198 |
| AseI | ATTAAT | 1 cut(s) | 3702 |
| AsiGI | ACCGGT | 1 cut(s) | 1202 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 345, 1035 |
| Asp718I | GGTACC | 2 cut(s) | 2628, 3257 |
| AspLEI | GCGC | 4 cut(s) | 1125, 2158, 2473, 4316 |
| AspS9I | GGNCC | 7 cut(s) | 881, 1208, 2482, 2881, 3328, 3932, 4194 |
| AsuC2I | CCSGG | 1 cut(s) | 3482 |
| AvaI | CYCGRG | 1 cut(s) | 2633 |
| AvaII | GGWCC | 6 cut(s) | 1208, 2482, 2881, 3328, 3932, 4194 |
| BaeGI | GKGCMC | 1 cut(s) | 2866 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1094, 1127 |
| BalI | TGGCCA | 3 cut(s) | 1667, 3111, 3842 |
| BanI | GGYRCC | 5 cut(s) | 782, 2535, 2628, 3257, 4313 |
| BanII | GRGCYC | 1 cut(s) | 2036 |
| BauI | CACGAG | 2 cut(s) | 1304, 2887 |
| BbsI | GAAGAC | 1 cut(s) | 2645 |
| Bbv12I | GWGCWC | 4 cut(s) | 622, 2036, 2386, 2866 |
| BbvCI | CCTCAGC | 1 cut(s) | 981 |
| BbvI | GCAGC | 6 cut(s) | 1547, 1898, 1933, 2951, 3452, 3665 |
| BceAI | ACGGC | 1 cut(s) | 4301 |
| BcnI | CCSGG | 1 cut(s) | 3482 |
| BcoDI | GTCTC | 9 cut(s) | 957, 1235, 1951, 2062, 2206, 2329, 2425, 2437, 2802 |
| BfaI | CTAG | 8 cut(s) | 767, 2048, 2205, 2328, 2436, 2900, 3195, 4454 |
| BfmI | CTRYAG | 5 cut(s) | 1884, 2151, 2172, 2465, 2692 |
| BfoI | RGCGCY | 1 cut(s) | 4317 |
| BfrI | CTTAAG | 2 cut(s) | 2486, 2804 |
| BfuAI | ACCTGC | 1 cut(s) | 1895 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1664 |
| BglII | AGATCT | 1 cut(s) | 2828 |
| BisI | GCNGC | 6 cut(s) | 1536, 1887, 1947, 2965, 3441, 3654 |
| BlsI | GCNGC | 6 cut(s) | 1537, 1888, 1948, 2966, 3442, 3655 |
| BmcAI | AGTACT | 2 cut(s) | 2109, 3639 |
| Bme18I | GGWCC | 6 cut(s) | 1208, 2482, 2881, 3328, 3932, 4194 |
| BmeT110I | CYCGRG | 1 cut(s) | 2633 |
| BmgBI | CACGTC | 1 cut(s) | 4177 |
| BmgT120I | GGNCC | 7 cut(s) | 881, 1208, 2482, 2881, 3328, 3932, 4194 |
| BmrI | ACTGGG | 4 cut(s) | 306, 3254, 3256, 3307 |
| BmsI | GCATC | 8 cut(s) | 560, 1460, 1807, 2103, 2125, 2482, 4006, 4384 |
| BmuI | ACTGGG | 4 cut(s) | 306, 3254, 3256, 3307 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3930 |
| BpiI | GAAGAC | 1 cut(s) | 2645 |
| BpmI | CTGGAG | 4 cut(s) | 1091, 1230, 3553, 4044 |
| Bpu10I | CCTNAGC | 2 cut(s) | 981, 3587 |
| BpuEI | CTTGAG | 3 cut(s) | 606, 2690, 3354 |
| BpuMI | CCSGG | 1 cut(s) | 3482 |
| BsaAI | YACGTR | 1 cut(s) | 2858 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2910, 4502 |
| BsaHI | GRCGYC | 1 cut(s) | 4314 |
| BsaI | GGTCTC | 5 cut(s) | 1951, 2206, 2329, 2425, 2437 |
| BsaWI | WCCGGW | 1 cut(s) | 1202 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1989, 2019, 3972, 4002, 4302, 4332 |
| Bse118I | RCCGGY | 2 cut(s) | 1202, 2052 |
| Bse3DI | GCAATG | 2 cut(s) | 1176, 3415 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2910, 4502 |
| BseJI | GATNNNNATC | 2 cut(s) | 2910, 4502 |
| BseMI | GCAATG | 2 cut(s) | 1176, 3415 |
| BseRI | GAGGAG | 5 cut(s) | 155, 3550, 3662, 3980, 3993 |
| BseSI | GKGCMC | 1 cut(s) | 2866 |
| BseXI | GCAGC | 6 cut(s) | 1547, 1898, 1933, 2951, 3452, 3665 |
| BseYI | CCCAGC | 2 cut(s) | 2729, 3591 |
| BsgI | GTGCAG | 1 cut(s) | 1554 |
| Bsh1236I | CGCG | 1 cut(s) | 1125 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1129 |
| BshNI | GGYRCC | 5 cut(s) | 782, 2535, 2628, 3257, 4313 |
| BshTI | ACCGGT | 1 cut(s) | 1202 |
| BsiEI | CGRYCG | 1 cut(s) | 1129 |
| BsiHKAI | GWGCWC | 4 cut(s) | 622, 2036, 2386, 2866 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2633 |
| BsiSI | CCGG | 3 cut(s) | 1203, 2053, 3482 |
| BslFI | GGGAC | 5 cut(s) | 307, 1890, 2495, 4207, 4337 |
| BsmAI | GTCTC | 9 cut(s) | 957, 1235, 1951, 2062, 2206, 2329, 2425, 2437, 2802 |
| BsmBI | CGTCTC | 1 cut(s) | 2062 |
| BsmFI | GGGAC | 5 cut(s) | 307, 1890, 2495, 4207, 4337 |
| BsmI | GAATGC | 3 cut(s) | 414, 459, 1650 |
| Bso31I | GGTCTC | 5 cut(s) | 1951, 2206, 2329, 2425, 2437 |
| BsoBI | CYCGRG | 1 cut(s) | 2633 |
| Bsp1286I | GDGCHC | 4 cut(s) | 622, 2036, 2386, 2866 |
| Bsp1407I | TGTACA | 1 cut(s) | 3490 |
| Bsp19I | CCATGG | 1 cut(s) | 4248 |
| BspACI | CCGC | 5 cut(s) | 89, 153, 165, 444, 1125 |
| BspFNI | CGCG | 1 cut(s) | 1125 |
| BspHI | TCATGA | 2 cut(s) | 3460, 4435 |
| BspMAI | CTGCAG | 3 cut(s) | 1888, 2176, 2696 |
| BspMI | ACCTGC | 1 cut(s) | 1895 |
| BspPI | GGATC | 4 cut(s) | 129, 664, 4048, 4193 |
| BspT107I | GGYRCC | 5 cut(s) | 782, 2535, 2628, 3257, 4313 |
| BspTI | CTTAAG | 2 cut(s) | 2486, 2804 |
| BspTNI | GGTCTC | 5 cut(s) | 1951, 2206, 2329, 2425, 2437 |
| BsrDI | GCAATG | 2 cut(s) | 1176, 3415 |
| BsrFI | RCCGGY | 2 cut(s) | 1202, 2052 |
| BsrGI | TGTACA | 1 cut(s) | 3490 |
| BssAI | RCCGGY | 2 cut(s) | 1202, 2052 |
| BssNAI | GTATAC | 1 cut(s) | 2855 |
| BssNI | GRCGYC | 1 cut(s) | 4314 |
| BssSI | CACGAG | 2 cut(s) | 1304, 2887 |
| BssT1I | CCWWGG | 4 cut(s) | 439, 3818, 4189, 4248 |
| Bst1107I | GTATAC | 1 cut(s) | 2855 |
| Bst2BI | CACGAG | 2 cut(s) | 1304, 2887 |
| Bst6I | CTCTTC | 8 cut(s) | 684, 735, 752, 2060, 2192, 2871, 3801, 4479 |
| BstACI | GRCGYC | 1 cut(s) | 4314 |
| BstAFI | CTTAAG | 2 cut(s) | 2486, 2804 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1197, 2700 |
| BstAUI | TGTACA | 1 cut(s) | 3490 |
| BstBAI | YACGTR | 1 cut(s) | 2858 |
| BstC8I | GCNNGC | 4 cut(s) | 1010, 2054, 3406, 3438 |
| BstDSI | CCRYGG | 1 cut(s) | 4248 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2489, 2708 |
| BstFNI | CGCG | 1 cut(s) | 1125 |
| BstH2I | RGCGCY | 1 cut(s) | 4317 |
| BstHHI | GCGC | 4 cut(s) | 1125, 2158, 2473, 4316 |
| BstMAI | GTCTC | 9 cut(s) | 957, 1235, 1951, 2062, 2206, 2329, 2425, 2437, 2802 |
| BstMCI | CGRYCG | 1 cut(s) | 1129 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 646, 1197, 1664, 1714, 2053, 2544, 2613, 2700, 2779 |
| BstNSI | RCATGY | 3 cut(s) | 3387, 3408, 3440 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3930 |
| BstSFI | CTRYAG | 5 cut(s) | 1884, 2151, 2172, 2465, 2692 |
| BstSLI | GKGCMC | 1 cut(s) | 2866 |
| BstUI | CGCG | 1 cut(s) | 1125 |
| BstV1I | GCAGC | 6 cut(s) | 1547, 1898, 1933, 2951, 3452, 3665 |
| BstV2I | GAAGAC | 1 cut(s) | 2645 |
| BstX2I | RGATCY | 3 cut(s) | 121, 2828, 4053 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1016 |
| BstYI | RGATCY | 3 cut(s) | 121, 2828, 4053 |
| BstZ17I | GTATAC | 1 cut(s) | 2855 |
| BtgI | CCRYGG | 1 cut(s) | 4248 |
| BtgZI | GCGATG | 1 cut(s) | 3931 |
| BtrI | CACGTC | 1 cut(s) | 4177 |
| BtsI | GCAGTG | 2 cut(s) | 864, 3049 |
| BtsIMutI | CAGTG | 8 cut(s) | 864, 2254, 2377, 2549, 3049, 3242, 3333, 3529 |
| BveI | ACCTGC | 1 cut(s) | 1895 |
| Cac8I | GCNNGC | 4 cut(s) | 1010, 2054, 3406, 3438 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2180, 2964, 3212 |
| CciI | TCATGA | 2 cut(s) | 3460, 4435 |
| CfoI | GCGC | 4 cut(s) | 1125, 2158, 2473, 4316 |
| Cfr10I | RCCGGY | 2 cut(s) | 1202, 2052 |
| Cfr13I | GGNCC | 7 cut(s) | 881, 1208, 2482, 2881, 3328, 3932, 4194 |
| CspAI | ACCGGT | 1 cut(s) | 1202 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 715, 750 |
| DinI | GGCGCC | 1 cut(s) | 4315 |
| DraI | TTTAAA | 1 cut(s) | 2583 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 909, 3456 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 909, 3456 |
| EaeI | YGGCCR | 4 cut(s) | 1665, 1715, 3109, 3840 |
| Eam1104I | CTCTTC | 8 cut(s) | 684, 735, 752, 2060, 2192, 2871, 3801, 4479 |
| EarI | CTCTTC | 8 cut(s) | 684, 735, 752, 2060, 2192, 2871, 3801, 4479 |
| Ecl136II | GAGCTC | 1 cut(s) | 2034 |
| Eco130I | CCWWGG | 4 cut(s) | 439, 3818, 4189, 4248 |
| Eco147I | AGGCCT | 6 cut(s) | 438, 462, 500, 1849, 2203, 2326 |
| Eco24I | GRGCYC | 1 cut(s) | 2036 |
| Eco31I | GGTCTC | 5 cut(s) | 1951, 2206, 2329, 2425, 2437 |
| Eco47I | GGWCC | 6 cut(s) | 1208, 2482, 2881, 3328, 3932, 4194 |
| Eco53kI | GAGCTC | 1 cut(s) | 2034 |
| Eco57I | CTGAAG | 8 cut(s) | 708, 935, 2106, 3797, 4065, 4128, 4203, 4499 |
| Eco88I | CYCGRG | 1 cut(s) | 2633 |
| EcoICRI | GAGCTC | 1 cut(s) | 2034 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2489, 2708 |
| EcoO109I | RGGNCCY | 4 cut(s) | 2482, 2881, 3328, 3932 |
| EcoRI | GAATTC | 1 cut(s) | 2252 |
| EcoT14I | CCWWGG | 4 cut(s) | 439, 3818, 4189, 4248 |
| EcoT22I | ATGCAT | 3 cut(s) | 553, 1475, 2118 |
| EcoT38I | GRGCYC | 1 cut(s) | 2036 |
| EgeI | GGCGCC | 1 cut(s) | 4315 |
| EheI | GGCGCC | 1 cut(s) | 4315 |
| ErhI | CCWWGG | 4 cut(s) | 439, 3818, 4189, 4248 |
| Esp3I | CGTCTC | 1 cut(s) | 2062 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1020, 1052, 3911, 3943 |
| FaqI | GGGAC | 5 cut(s) | 307, 1890, 2495, 4207, 4337 |
| FauI | CCCGC | 1 cut(s) | 82 |
| FauNDI | CATATG | 1 cut(s) | 4306 |
| FblI | GTMKAC | 6 cut(s) | 772, 1129, 1501, 1522, 1727, 2854 |
| Fnu4HI | GCNGC | 6 cut(s) | 1536, 1887, 1947, 2965, 3441, 3654 |
| FriOI | GRGCYC | 1 cut(s) | 2036 |
| FseI | GGCCGGCC | 1 cut(s) | 2056 |
| Fsp4HI | GCNGC | 6 cut(s) | 1536, 1887, 1947, 2965, 3441, 3654 |
| FspBI | CTAG | 8 cut(s) | 767, 2048, 2205, 2328, 2436, 2900, 3195, 4454 |
| GlaI | GCGC | 4 cut(s) | 1124, 2157, 2472, 4315 |
| GluI | GCNGC | 6 cut(s) | 1536, 1887, 1947, 2965, 3441, 3654 |
| GsaI | CCCAGC | 2 cut(s) | 2733, 3595 |
| GsuI | CTGGAG | 4 cut(s) | 1091, 1230, 3553, 4044 |
| HaeII | RGCGCY | 1 cut(s) | 4317 |
| HapII | CCGG | 3 cut(s) | 1203, 2053, 3482 |
| HhaI | GCGC | 4 cut(s) | 1125, 2158, 2473, 4316 |
| Hin1I | GRCGYC | 1 cut(s) | 4314 |
| Hin6I | GCGC | 4 cut(s) | 1123, 2156, 2471, 4314 |
| HinP1I | GCGC | 4 cut(s) | 1123, 2156, 2471, 4314 |
| HincII | GTYRAC | 8 cut(s) | 773, 1130, 1300, 1502, 1523, 1728, 3065, 4356 |
| HindII | GTYRAC | 8 cut(s) | 773, 1130, 1300, 1502, 1523, 1728, 3065, 4356 |
| HindIII | AAGCTT | 5 cut(s) | 200, 1446, 2088, 2309, 3420 |
| HpaI | GTTAAC | 2 cut(s) | 1300, 4356 |
| HpaII | CCGG | 3 cut(s) | 1203, 2053, 3482 |
| Hpy99I | CGWCG | 1 cut(s) | 4338 |
| HpyCH4IV | ACGT | 4 cut(s) | 2857, 3280, 4176, 4299 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 646, 1197, 1664, 1714, 2053, 2544, 2613, 2700, 2779 |
| HpySE526I | ACGT | 4 cut(s) | 2857, 3280, 4176, 4299 |
| Hsp92I | GRCGYC | 1 cut(s) | 4314 |
| HspAI | GCGC | 4 cut(s) | 1123, 2156, 2471, 4314 |
| KasI | GGCGCC | 1 cut(s) | 4313 |
| KpnI | GGTACC | 2 cut(s) | 2632, 3261 |
| KroI | GCCGGC | 1 cut(s) | 2052 |
| KroNI | GCCGGC | 1 cut(s) | 2054 |
| KspAI | GTTAAC | 2 cut(s) | 1300, 4356 |
| LmnI | GCTCC | 6 cut(s) | 53, 683, 1825, 2821, 3326, 3967 |
| Lsp1109I | GCAGC | 6 cut(s) | 1547, 1898, 1933, 2951, 3452, 3665 |
| LweI | GCATC | 8 cut(s) | 560, 1460, 1807, 2103, 2125, 2482, 4006, 4384 |
| MaeI | CTAG | 8 cut(s) | 767, 2048, 2205, 2328, 2436, 2900, 3195, 4454 |
| MaeII | ACGT | 4 cut(s) | 2857, 3280, 4176, 4299 |
| MfeI | CAATTG | 3 cut(s) | 2390, 2867, 3524 |
| MflI | RGATCY | 3 cut(s) | 121, 2828, 4053 |
| MhlI | GDGCHC | 4 cut(s) | 622, 2036, 2386, 2866 |
| MlsI | TGGCCA | 3 cut(s) | 1667, 3111, 3842 |
| MluNI | TGGCCA | 3 cut(s) | 1667, 3111, 3842 |
| Mly113I | GGCGCC | 1 cut(s) | 4314 |
| MlyI | GAGTC | 5 cut(s) | 1082, 1237, 1996, 4027, 4253 |
| MmeI | TCCRAC | 4 cut(s) | 1657, 1948, 1954, 3179 |
| Mox20I | TGGCCA | 3 cut(s) | 1667, 3111, 3842 |
| Mph1103I | ATGCAT | 3 cut(s) | 553, 1475, 2118 |
| MroNI | GCCGGC | 1 cut(s) | 2052 |
| MroXI | GAANNNNTTC | 2 cut(s) | 345, 1035 |
| MscI | TGGCCA | 3 cut(s) | 1667, 3111, 3842 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1860 |
| Msp20I | TGGCCA | 3 cut(s) | 1667, 3111, 3842 |
| MspA1I | CMGCKG | 1 cut(s) | 3443 |
| MspCI | CTTAAG | 2 cut(s) | 2486, 2804 |
| MspI | CCGG | 3 cut(s) | 1203, 2053, 3482 |
| MunI | CAATTG | 3 cut(s) | 2390, 2867, 3524 |
| Mva1269I | GAATGC | 3 cut(s) | 414, 459, 1650 |
| MvnI | CGCG | 1 cut(s) | 1125 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 646, 1197, 1664, 1714, 2053, 2544, 2613, 2700, 2779 |
| NaeI | GCCGGC | 1 cut(s) | 2054 |
| NarI | GGCGCC | 1 cut(s) | 4314 |
| NciI | CCSGG | 1 cut(s) | 3482 |
| NcoI | CCATGG | 1 cut(s) | 4248 |
| NdeI | CATATG | 1 cut(s) | 4306 |
| NgoMIV | GCCGGC | 1 cut(s) | 2052 |
| NmeAIII | GCCGAG | 1 cut(s) | 2365 |
| NmuCI | GTSAC | 7 cut(s) | 98, 233, 2372, 2924, 2998, 3857, 4004 |
| NsiI | ATGCAT | 3 cut(s) | 553, 1475, 2118 |
| NspI | RCATGY | 3 cut(s) | 3387, 3408, 3440 |
| PaeI | GCATGC | 2 cut(s) | 3408, 3440 |
| PagI | TCATGA | 2 cut(s) | 3460, 4435 |
| PaqCI | CACCTGC | 1 cut(s) | 1895 |
| PasI | CCCWGGG | 1 cut(s) | 2478 |
| PceI | AGGCCT | 6 cut(s) | 438, 462, 500, 1849, 2203, 2326 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2077 |
| PctI | GAATGC | 3 cut(s) | 414, 459, 1650 |
| PdiI | GCCGGC | 1 cut(s) | 2054 |
| PdmI | GAANNNNTTC | 2 cut(s) | 345, 1035 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1253 |
| PfoI | TCCNGGA | 1 cut(s) | 1147 |
| PinAI | ACCGGT | 1 cut(s) | 1202 |
| PkrI | GCNGC | 6 cut(s) | 1537, 1888, 1948, 2966, 3442, 3655 |
| PleI | GAGTC | 5 cut(s) | 1081, 1237, 1995, 4027, 4252 |
| PluTI | GGCGCC | 1 cut(s) | 4317 |
| PpsI | GAGTC | 5 cut(s) | 1081, 1237, 1995, 4027, 4252 |
| Ppu21I | YACGTR | 1 cut(s) | 2858 |
| PpuMI | RGGWCCY | 4 cut(s) | 2482, 2881, 3328, 3932 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3930 |
| PshBI | ATTAAT | 1 cut(s) | 3702 |
| PsiI | TTATAA | 2 cut(s) | 4290, 4545 |
| Psp124BI | GAGCTC | 1 cut(s) | 2036 |
| Psp5II | RGGWCCY | 4 cut(s) | 2482, 2881, 3328, 3932 |
| PspFI | CCCAGC | 2 cut(s) | 2729, 3591 |
| PspPI | GGNCC | 7 cut(s) | 881, 1208, 2482, 2881, 3328, 3932, 4194 |
| PspPPI | RGGWCCY | 4 cut(s) | 2482, 2881, 3328, 3932 |
| PstI | CTGCAG | 3 cut(s) | 1888, 2176, 2696 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2180, 2964, 3212 |
| PsuI | RGATCY | 3 cut(s) | 121, 2828, 4053 |
| PvuII | CAGCTG | 1 cut(s) | 3443 |
| RigI | GGCCGGCC | 1 cut(s) | 2056 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1860 |
| SacI | GAGCTC | 1 cut(s) | 2036 |
| SalI | GTCGAC | 5 cut(s) | 771, 1128, 1500, 1521, 1726 |
| SatI | GCNGC | 6 cut(s) | 1536, 1887, 1947, 2965, 3441, 3654 |
| Sau96I | GGNCC | 7 cut(s) | 881, 1208, 2482, 2881, 3328, 3932, 4194 |
| ScaI | AGTACT | 2 cut(s) | 2109, 3639 |
| SchI | GAGTC | 5 cut(s) | 1082, 1237, 1996, 4027, 4253 |
| SduI | GDGCHC | 4 cut(s) | 622, 2036, 2386, 2866 |
| SfaNI | GCATC | 8 cut(s) | 560, 1460, 1807, 2103, 2125, 2482, 4006, 4384 |
| SfcI | CTRYAG | 5 cut(s) | 1884, 2151, 2172, 2465, 2692 |
| SfoI | GGCGCC | 1 cut(s) | 4315 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1202 |
| SinI | GGWCC | 6 cut(s) | 1208, 2482, 2881, 3328, 3932, 4194 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1860 |
| SmlI | CTYRAG | 5 cut(s) | 621, 2486, 2705, 2804, 3369 |
| SmoI | CTYRAG | 5 cut(s) | 621, 2486, 2705, 2804, 3369 |
| SphI | GCATGC | 2 cut(s) | 3408, 3440 |
| SseBI | AGGCCT | 6 cut(s) | 438, 462, 500, 1849, 2203, 2326 |
| SsiI | CCGC | 5 cut(s) | 89, 153, 165, 444, 1125 |
| SspDI | GGCGCC | 1 cut(s) | 4313 |
| SspI | AATATT | 3 cut(s) | 679, 2755, 3706 |
| SspMI | CTAG | 8 cut(s) | 767, 2048, 2205, 2328, 2436, 2900, 3195, 4454 |
| SstI | GAGCTC | 1 cut(s) | 2036 |
| StuI | AGGCCT | 6 cut(s) | 438, 462, 500, 1849, 2203, 2326 |
| StyI | CCWWGG | 4 cut(s) | 439, 3818, 4189, 4248 |
| TaiI | ACGT | 4 cut(s) | 2860, 3283, 4179, 4302 |
| TaqI | TCGA | 9 cut(s) | 629, 772, 901, 1129, 1501, 1522, 1727, 1942, 2914 |
| TaqII | GACCGA | 1 cut(s) | 4211 |
| TatI | WGTACW | 5 cut(s) | 2107, 2919, 3490, 3565, 3637 |
| TscAI | CASTG | 8 cut(s) | 864, 2254, 2377, 2549, 3049, 3249, 3340, 3536 |
| TseFI | GTSAC | 7 cut(s) | 98, 233, 2372, 2924, 2998, 3857, 4004 |
| TseI | GCWGC | 6 cut(s) | 1535, 1886, 1946, 2964, 3440, 3653 |
| Tsp45I | GTSAC | 7 cut(s) | 98, 233, 2372, 2924, 2998, 3857, 4004 |
| TspGWI | ACGGA | 5 cut(s) | 1328, 2246, 2369, 2566, 4322 |
| TspRI | CASTG | 8 cut(s) | 864, 2254, 2377, 2549, 3049, 3249, 3340, 3536 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1253 |
| Vha464I | CTTAAG | 2 cut(s) | 2486, 2804 |
| VneI | GTGCAC | 1 cut(s) | 2862 |
| VpaK11BI | GGWCC | 6 cut(s) | 1208, 2482, 2881, 3328, 3932, 4194 |
| VspI | ATTAAT | 1 cut(s) | 3702 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2489, 2708 |
| XapI | RAATTY | 8 cut(s) | 105, 345, 368, 2252, 2297, 3833, 4180, 4385 |
| XbaI | TCTAGA | 1 cut(s) | 4453 |
| XceI | RCATGY | 3 cut(s) | 3387, 3408, 3440 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3606 |
| XmiI | GTMKAC | 6 cut(s) | 772, 1129, 1501, 1522, 1727, 2854 |
| XmnI | GAANNNNTTC | 2 cut(s) | 345, 1035 |
| XspI | CTAG | 8 cut(s) | 767, 2048, 2205, 2328, 2436, 2900, 3195, 4454 |
| ZrmI | AGTACT | 2 cut(s) | 2109, 3639 |
| Zsp2I | ATGCAT | 3 cut(s) | 553, 1475, 2118 |