Prupe.4G058600_v2.0.a1

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
2799749 .. 2800992
1244 bp
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UTR
Exon/CDS
Intron
Prupe.4G058600.1

Sequence Viewer

Length: 309 bp
ATGGGTCATCCCGTGCAGATGAAAACCATCATTGCCAGCTGCATTGCGTGTGTTGCTGTTTCTTTAATCGGTTCCTTTGTTGCTAGCTATACATTGAATATCGGGGGAACTCCAAGAACATGCTGTGGAGGAGGAGGGCCATACAATTACAATTCTGCACAGGCAAGTGCCTGTCACGGCCCTTCACAATTTATCAATTGGGATGCTATACGCTTCACTGAGGCAGCATATAGGTGGATGACCAATGATTTGTTAAAAGGAAAATACACCATTCCCCAAATAGGCACCTTGTGTGTTTCAGAAGTGTGA

Protein Analysis

103

Amino Acids

10.87

Weight (kDa)

8.26

Isoelectric Point (pI)

38.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 284
AdeI CACNNNGTG 1 cut(s) 291
AfiI CCNNNNNNNGG 1 cut(s) 281
AgsI TTSAA 1 cut(s) 97
AluBI AGCT 2 cut(s) 39, 87
AluI AGCT 2 cut(s) 39, 87
AoxI GGCC 2 cut(s) 137, 178
ApeKI GCWGC 2 cut(s) 39, 224
ArsI GACNNNNNNTTYG 2 cut(s) 232, 264
AspS9I GGNCC 2 cut(s) 137, 179
AsuNHI GCTAGC 1 cut(s) 83
BanI GGYRCC 1 cut(s) 284
BbvI GCAGC 2 cut(s) 26, 236
BccI CCATC 1 cut(s) 35
BceAI ACGGC 1 cut(s) 193
BfaI CTAG 1 cut(s) 84
BisI GCNGC 2 cut(s) 40, 225
BlsI GCNGC 2 cut(s) 41, 226
BmgT120I GGNCC 2 cut(s) 137, 179
BmiI GGNNCC 2 cut(s) 73, 286
BmsI GCATC 1 cut(s) 193
BmtI GCTAGC 1 cut(s) 87
Bsc4I CCNNNNNNNGG 1 cut(s) 281
Bse3DI GCAATG 2 cut(s) 30, 42
BseGI GGATG 3 cut(s) 7, 208, 243
BseLI CCNNNNNNNGG 1 cut(s) 281
BseMI GCAATG 2 cut(s) 30, 42
BseMII CTCAG 1 cut(s) 210
BseRI GAGGAG 2 cut(s) 144, 147
BseXI GCAGC 2 cut(s) 26, 236
BsgI GTGCAG 2 cut(s) 35, 141
BshFI GGCC 2 cut(s) 139, 180
BshNI GGYRCC 1 cut(s) 284
BslI CCNNNNNNNGG 1 cut(s) 281
BsnI GGCC 2 cut(s) 139, 180
BspANI GGCC 2 cut(s) 139, 180
BspCNI CTCAG 1 cut(s) 211
BspLI GGNNCC 2 cut(s) 73, 286
BspOI GCTAGC 1 cut(s) 87
BspT107I GGYRCC 1 cut(s) 284
BsrDI GCAATG 2 cut(s) 30, 42
BstC8I GCNNGC 2 cut(s) 37, 85
BstDEI CTNAG 1 cut(s) 219
BstF5I GGATG 3 cut(s) 7, 208, 243
BstMWI GCNNNNNNNGC 1 cut(s) 53
BstNSI RCATGY 1 cut(s) 123
BstV1I GCAGC 2 cut(s) 26, 236
BsuRI GGCC 2 cut(s) 139, 180
BtsCI GGATG 3 cut(s) 7, 208, 243
BtsIMutI CAGTG 1 cut(s) 216
Cac8I GCNNGC 2 cut(s) 37, 85
Cfr13I GGNCC 2 cut(s) 137, 179
CviAII CATG 1 cut(s) 120
CviJI RGCY 4 cut(s) 39, 87, 139, 180
CviKI_1 RGCY 4 cut(s) 39, 87, 139, 180
DdeI CTNAG 1 cut(s) 219
DraIII CACNNNGTG 1 cut(s) 291
FaeI CATG 1 cut(s) 123
FaiI YATR 6 cut(s) 90, 121, 142, 209, 229, 231
FatI CATG 1 cut(s) 119
Fnu4HI GCNGC 2 cut(s) 40, 225
FokI GGATG 2 cut(s) 215, 250
Fsp4HI GCNGC 2 cut(s) 40, 225
FspBI CTAG 1 cut(s) 84
GluI GCNGC 2 cut(s) 40, 225
HaeIII GGCC 2 cut(s) 139, 180
Hin1II CATG 1 cut(s) 123
Hpy188I TCNGA 1 cut(s) 301
HpyAV CCTTC 1 cut(s) 192
HpyCH4V TGCA 3 cut(s) 16, 42, 158
HpyF10VI GCNNNNNNNGC 1 cut(s) 53
HpyF3I CTNAG 1 cut(s) 219
Hsp92II CATG 1 cut(s) 123
LpnPI CCDG 3 cut(s) 49, 146, 184
Lsp1109I GCAGC 2 cut(s) 26, 236
LweI GCATC 1 cut(s) 193
MaeI CTAG 1 cut(s) 84
MaeIII GTNAC 1 cut(s) 173
MfeI CAATTG 1 cut(s) 196
MluCI AATT 4 cut(s) 145, 151, 188, 196
MnlI CCTC 4 cut(s) 122, 125, 128, 214
MseI TTAA 2 cut(s) 65, 254
MslI CAYNNNNRTG 1 cut(s) 232
MspA1I CMGCKG 1 cut(s) 39
MunI CAATTG 1 cut(s) 196
MwoI GCNNNNNNNGC 1 cut(s) 53
NheI GCTAGC 1 cut(s) 83
NlaIII CATG 1 cut(s) 123
NlaIV GGNNCC 2 cut(s) 73, 286
NmuCI GTSAC 1 cut(s) 173
NspI RCATGY 1 cut(s) 123
PkrI GCNGC 2 cut(s) 41, 226
PspN4I GGNNCC 2 cut(s) 73, 286
PspPI GGNCC 2 cut(s) 137, 179
PvuII CAGCTG 1 cut(s) 39
RseI CAYNNNNRTG 1 cut(s) 232
SaqAI TTAA 2 cut(s) 65, 254
SatI GCNGC 2 cut(s) 40, 225
Sau96I GGNCC 2 cut(s) 137, 179
SetI ASST 4 cut(s) 41, 89, 236, 290
SfaNI GCATC 1 cut(s) 193
SmiMI CAYNNNNRTG 1 cut(s) 232
Sse9I AATT 4 cut(s) 145, 151, 188, 196
SspMI CTAG 1 cut(s) 84
TasI AATT 4 cut(s) 145, 151, 188, 196
Tru1I TTAA 2 cut(s) 65, 254
Tru9I TTAA 2 cut(s) 65, 254
TscAI CASTG 1 cut(s) 223
TseFI GTSAC 1 cut(s) 173
TseI GCWGC 2 cut(s) 39, 224
Tsp45I GTSAC 1 cut(s) 173
TspDTI ATGAA 1 cut(s) 35
TspRI CASTG 1 cut(s) 223
XceI RCATGY 1 cut(s) 123
XspI CTAG 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.