RchiOBHm_Chr5g0010241

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
6792630 .. 6792869
240 bp
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UTR
Exon/CDS
Intron
PRQ29102

Sequence Viewer

Length: 138 bp
ATGCATTTCTATCATTCTCCAAACCAACTTGGATTTATTGGGGGAACAGTCGAAGCATGCTGTGGAGGCGGAGGACCATACCATTACAACTCATCGGCACAATGCGGCTCTCTAGAAGCAAATGCTTGCGAAAACTGA

Protein Analysis

45

Amino Acids

4.68

Weight (kDa)

5.22

Isoelectric Point (pI)

82.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 69, 105
AspS9I GGNCC 1 cut(s) 74
AvaII GGWCC 1 cut(s) 74
BfaI CTAG 1 cut(s) 113
BisI GCNGC 1 cut(s) 106
BlsI GCNGC 1 cut(s) 107
Bme18I GGWCC 1 cut(s) 74
BmgT120I GGNCC 1 cut(s) 74
BspACI CCGC 2 cut(s) 69, 105
Bst4CI ACNGT 1 cut(s) 49
BstC8I GCNNGC 2 cut(s) 58, 127
BstMWI GCNNNNNNNGC 1 cut(s) 66
BstNSI RCATGY 1 cut(s) 60
Cac8I GCNNGC 2 cut(s) 58, 127
Cfr13I GGNCC 1 cut(s) 74
CviAII CATG 1 cut(s) 57
CviJI RGCY 1 cut(s) 108
CviKI_1 RGCY 1 cut(s) 108
EciI GGCGGA 1 cut(s) 84
Eco47I GGWCC 1 cut(s) 74
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 1 cut(s) 60
FaiI YATR 2 cut(s) 58, 79
FatI CATG 1 cut(s) 56
Fnu4HI GCNGC 1 cut(s) 106
Fsp4HI GCNGC 1 cut(s) 106
FspBI CTAG 1 cut(s) 113
GluI GCNGC 1 cut(s) 106
Hin1II CATG 1 cut(s) 60
Hpy188III TCNNGA 1 cut(s) 113
HpyCH4III ACNGT 1 cut(s) 49
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 1 cut(s) 66
Hsp92II CATG 1 cut(s) 60
MaeI CTAG 1 cut(s) 113
MnlI CCTC 2 cut(s) 59, 65
Mph1103I ATGCAT 1 cut(s) 6
MwoI GCNNNNNNNGC 1 cut(s) 66
NlaIII CATG 1 cut(s) 60
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 60
PaeI GCATGC 1 cut(s) 60
PkrI GCNGC 1 cut(s) 107
PspPI GGNCC 1 cut(s) 74
SatI GCNGC 1 cut(s) 106
Sau96I GGNCC 1 cut(s) 74
SgeI CNNG 3 cut(s) 41, 69, 125
SinI GGWCC 1 cut(s) 74
SphI GCATGC 1 cut(s) 60
SsiI CCGC 2 cut(s) 69, 105
SspMI CTAG 1 cut(s) 113
TaaI ACNGT 1 cut(s) 49
TaqI TCGA 1 cut(s) 51
TauI GCSGC 1 cut(s) 108
VpaK11BI GGWCC 1 cut(s) 74
XbaI TCTAGA 1 cut(s) 112
XceI RCATGY 1 cut(s) 60
XspI CTAG 1 cut(s) 113
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.