Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0000773

Physical Location & Seq

Genomic Coordinates Reverse (-)

4111681 .. 4116199

Gene Structure 4519 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G036300.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 585 bp

ATGGTTGGGCTTGACAATTCCGGCAAGACTACCATTGTGCTCAGGATTAATGGAGAGGACACCAGTGTTGTCAGTCCCACACTTGGCTTCAACATCAAGACCATCACTTACCAAAAGTATACCCTTAATATATGGGATGTCGGGGGACAGAAAACAATAAGATCTTACTGGAGAAACTATTTTGAGCAAACTGATGGCCTAGTATGGGTAGTTGACAGTTCAGATCTTAGAAGGTTAGATGACTGCAAAATGGAACTTGATAATCTTTTGAAGGAAGAGAGGCTATCTGGATCATCCTTGATACTAGCAAATAAACAGGACATAAAAGGTGCCCTTACTCCAGAAGAAATTGCTAAGGTTTTGAACTTGGAGGCGATGGATAAAACTCGCCATTATGAAATTGTTCGCTGCAGTGCATACACGGGAGATGGACTGCTCGAGGGATTTGATTGGTTGGTCCAAGATATTGCCTCTCGGAGATCTATGTGCTGGACTAATGCCTATCTTGAGTATTTTATTTTTGGTTGTGTTTTGAGTGATTTTTCATTGAGGTGGAGAGTTATCTTGGTATTTATGGACAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000166 GO:0001882 GO:0001883 GO:0003006 GO:0003674 GO:0005488 GO:0005525 GO:0007021 GO:0007275 GO:0007349 GO:0008150 GO:0009553 GO:0009558 GO:0009561 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0016043 GO:0017076 GO:0019001 GO:0022414 GO:0022607 GO:0032501 GO:0032502 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0034622 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043933 GO:0044085 GO:0048229 GO:0048316 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0061458 GO:0065003 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arf

Protein Analysis

195

Amino Acids

22.28

Weight (kDa)

5.0

Isoelectric Point (pI)

48.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000773)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18390
fragaria_vesca	FvH4_4g12480 FvH4_4g12480 FvH4_4g12480 FvH4_4g12480 FvH4_5g30040 FvH4_5g30040 FvH4_5g30040 FvH4_5g30040 FvH4_5g30040 FvH4_5g30040 FvH4_5g30040 FvH4_5g30040 FvH4_5g30040 FvH4_5g30040 FvH4_5g39540 FvH4_5g39540 FvH4_5g39540 FvH4_5g39540
malus_domestica	MD03G1270500.v1.1
prunus_persica	Prupe.5G036300_v2.0.a1 Prupe.5G036300_v2.0.a1 Prupe.5G036300_v2.0.a1 Prupe.5G036300_v2.0.a1 Prupe.5G036300_v2.0.a1 Prupe.8G270100_v2.0.a1 Prupe.8G270100_v2.0.a1
pyrus_communis	pycom03g21570 pycom11g25830
rosa_chinensis	RchiOBHm_Chr2g0093181 RchiOBHm_Chr5g0004661 RchiOBHm_Chr6g0264421 RchiOBHm_Chr7g0224231 RchiOBHm_Chr7g0241851
rosa_laevigata	RLG00000000538 RLG00000001912
rosa_multiflora	Rmu_sc0001865.1_g000007
rosa_roxburghii	Rroxscaffold_3G00218600 Rroxscaffold_3G00235040
rosa_rugosa	Rorug02G0313600 Rorug02G0313700 Rorug02G0313800 Rorug02G0363900 Rorug03G0267000 Rorug03G0267100 Rorug03G0267200 Rorug03G0268000 Rorug07G0066800 Rorug07G0199700 Rorug07G0221500 Rorug07G0348000
rosa_samantha	Rh5AG128500 Rh6AG132000 Rh6AG319400 Rh6BG129200 Rh6DG114700 Rh7AG365600 Rh7AG502100 Rh7BG330100 Rh7BG357400 Rh7BG473500 Rh7CG020200 Rh7CG153100 Rh7CG518600 Rh7DG020200 Rh7DG360300 Rh7DG487400
rosa_wichuraiana	Rw0G009770 Rw6G027560 Rw7G042450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	329
AccI	GTMKAC	1 cut(s)	119
AclWI	GGATC	1 cut(s)	298
AfiI	CCNNNNNNNGG	2 cut(s)	83, 205
AgsI	TTSAA	3 cut(s)	91, 271, 364
AluBI	AGCT	1 cut(s)	582
AluI	AGCT	1 cut(s)	582
Alw21I	GWGCWC	1 cut(s)	42
AlwI	GGATC	1 cut(s)	298
Ama87I	CYCGRG	1 cut(s)	437
AoxI	GGCC	1 cut(s)	196
ApeKI	GCWGC	1 cut(s)	408
AseI	ATTAAT	1 cut(s)	48
Asp700I	GAANNNNTTC	1 cut(s)	402
AspS9I	GGNCC	1 cut(s)	457
AvaI	CYCGRG	1 cut(s)	437
AvaII	GGWCC	1 cut(s)	457
BaeGI	GKGCMC	1 cut(s)	334
BanI	GGYRCC	1 cut(s)	329
Bbv12I	GWGCWC	1 cut(s)	42
BbvI	GCAGC	1 cut(s)	395
BccI	CCATC	4 cut(s)	110, 188, 370, 422
BfaI	CTAG	2 cut(s)	200, 305
BfmI	CTRYAG	1 cut(s)	409
BglII	AGATCT	3 cut(s)	161, 223, 479
BisI	GCNGC	1 cut(s)	409
BlsI	GCNGC	1 cut(s)	410
Bme18I	GGWCC	1 cut(s)	457
BmeT110I	CYCGRG	1 cut(s)	437
BmgT120I	GGNCC	1 cut(s)	457
BmiI	GGNNCC	1 cut(s)	331
BpmI	CTGGAG	2 cut(s)	190, 324
Bpu10I	CCTNAGC	2 cut(s)	41, 354
BpuEI	CTTGAG	1 cut(s)	527
Bsc4I	CCNNNNNNNGG	2 cut(s)	83, 205
Bse1I	ACTGG	2 cut(s)	63, 173
BseGI	GGATG	2 cut(s)	142, 293
BseLI	CCNNNNNNNGG	2 cut(s)	83, 205
BseMII	CTCAG	1 cut(s)	55
BseNI	ACTGG	2 cut(s)	63, 173
BseSI	GKGCMC	1 cut(s)	334
BseXI	GCAGC	1 cut(s)	395
BshFI	GGCC	1 cut(s)	198
BshNI	GGYRCC	1 cut(s)	329
BsiHKAI	GWGCWC	1 cut(s)	42
BsiHKCI	CYCGRG	1 cut(s)	437
BsiSI	CCGG	1 cut(s)	21
BslFI	GGGAC	2 cut(s)	60, 159
BslI	CCNNNNNNNGG	2 cut(s)	83, 205
BsmFI	GGGAC	2 cut(s)	60, 159
BsnI	GGCC	1 cut(s)	198
BsoBI	CYCGRG	1 cut(s)	437
Bsp1286I	GDGCHC	2 cut(s)	42, 334
Bsp143I	GATC	4 cut(s)	161, 223, 290, 479
BspANI	GGCC	1 cut(s)	198
BspCNI	CTCAG	1 cut(s)	54
BspLI	GGNNCC	1 cut(s)	331
BspMAI	CTGCAG	1 cut(s)	413
BspPI	GGATC	1 cut(s)	298
BspT107I	GGYRCC	1 cut(s)	329
BsrI	ACTGG	2 cut(s)	63, 173
BssMI	GATC	4 cut(s)	161, 223, 290, 479
BssNAI	GTATAC	1 cut(s)	120
Bst1107I	GTATAC	1 cut(s)	120
Bst4CI	ACNGT	1 cut(s)	218
Bst6I	CTCTTC	1 cut(s)	270
BstDEI	CTNAG	3 cut(s)	41, 227, 354
BstF5I	GGATG	2 cut(s)	142, 293
BstKTI	GATC	4 cut(s)	164, 226, 293, 482
BstMBI	GATC	4 cut(s)	161, 223, 290, 479
BstSFI	CTRYAG	1 cut(s)	409
BstSLI	GKGCMC	1 cut(s)	334
BstV1I	GCAGC	1 cut(s)	395
BstX2I	RGATCY	3 cut(s)	161, 223, 479
BstYI	RGATCY	3 cut(s)	161, 223, 479
BstZ17I	GTATAC	1 cut(s)	120
BsuRI	GGCC	1 cut(s)	198
BtgZI	GCGATG	1 cut(s)	389
BtsCI	GGATG	2 cut(s)	142, 293
BtsI	GCAGTG	1 cut(s)	418
BtsIMutI	CAGTG	2 cut(s)	70, 418
Cfr13I	GGNCC	1 cut(s)	457
CviJI	RGCY	5 cut(s)	10, 87, 198, 283, 582
CviKI_1	RGCY	5 cut(s)	10, 87, 198, 283, 582
DdeI	CTNAG	3 cut(s)	41, 227, 354
DpnI	GATC	4 cut(s)	163, 225, 292, 481
DpnII	GATC	4 cut(s)	161, 223, 290, 479
Eam1104I	CTCTTC	1 cut(s)	270
EarI	CTCTTC	1 cut(s)	270
Eco47I	GGWCC	1 cut(s)	457
Eco88I	CYCGRG	1 cut(s)	437
FaiI	YATR	9 cut(s)	120, 131, 133, 205, 323, 396, 418, 485, 575
FalI	AAGNNNNNCTT	2 cut(s)	318, 350
FaqI	GGGAC	2 cut(s)	60, 159
FblI	GTMKAC	1 cut(s)	119
Fnu4HI	GCNGC	1 cut(s)	409
FokI	GGATG	2 cut(s)	149, 280
Fsp4HI	GCNGC	1 cut(s)	409
FspBI	CTAG	2 cut(s)	200, 305
GluI	GCNGC	1 cut(s)	409
GsuI	CTGGAG	2 cut(s)	190, 324
HaeIII	GGCC	1 cut(s)	198
HapII	CCGG	1 cut(s)	21
HincII	GTYRAC	1 cut(s)	214
HindII	GTYRAC	1 cut(s)	214
HpaII	CCGG	1 cut(s)	21
Hpy166II	GTNNAC	2 cut(s)	120, 214
Hpy188I	TCNGA	2 cut(s)	223, 477
Hpy188III	TCNNGA	5 cut(s)	43, 97, 288, 341, 506
Hpy8I	GTNNAC	2 cut(s)	120, 214
HpyAV	CCTTC	2 cut(s)	225, 265
HpyCH4III	ACNGT	1 cut(s)	218
HpyCH4V	TGCA	3 cut(s)	246, 411, 416
HpyF3I	CTNAG	3 cut(s)	41, 227, 354
Kzo9I	GATC	4 cut(s)	161, 223, 290, 479
LpnPI	CCDG	8 cut(s)	28, 34, 76, 154, 273, 302, 354, 475
Lsp1109I	GCAGC	1 cut(s)	395
MaeI	CTAG	2 cut(s)	200, 305
MalI	GATC	4 cut(s)	163, 225, 292, 481
MboI	GATC	4 cut(s)	161, 223, 290, 479
MboII	GAAGA	2 cut(s)	287, 356
MflI	RGATCY	3 cut(s)	161, 223, 479
MhlI	GDGCHC	2 cut(s)	42, 334
MluCI	AATT	3 cut(s)	16, 348, 399
MnlI	CCTC	6 cut(s)	49, 273, 364, 433, 481, 543
MroXI	GAANNNNTTC	1 cut(s)	402
MseI	TTAA	2 cut(s)	48, 126
MslI	CAYNNNNRTG	1 cut(s)	550
MspA1I	CMGCKG	1 cut(s)	582
MspI	CCGG	1 cut(s)	21
NdeII	GATC	4 cut(s)	161, 223, 290, 479
NlaIV	GGNNCC	1 cut(s)	331
PaeR7I	CTCGAG	1 cut(s)	437
PdmI	GAANNNNTTC	1 cut(s)	402
PkrI	GCNGC	1 cut(s)	410
PshBI	ATTAAT	1 cut(s)	48
PspN4I	GGNNCC	1 cut(s)	331
PspPI	GGNCC	1 cut(s)	457
PspXI	VCTCGAGB	1 cut(s)	437
PstI	CTGCAG	1 cut(s)	413
PsuI	RGATCY	3 cut(s)	161, 223, 479
PvuII	CAGCTG	1 cut(s)	582
RseI	CAYNNNNRTG	1 cut(s)	550
SaqAI	TTAA	2 cut(s)	48, 126
SatI	GCNGC	1 cut(s)	409
Sau3AI	GATC	4 cut(s)	161, 223, 290, 479
Sau96I	GGNCC	1 cut(s)	457
SduI	GDGCHC	2 cut(s)	42, 334
SetI	ASST	5 cut(s)	236, 331, 360, 554, 584
SfcI	CTRYAG	1 cut(s)	409
Sfr274I	CTCGAG	1 cut(s)	437
SinI	GGWCC	1 cut(s)	457
SlaI	CTCGAG	1 cut(s)	437
SmiMI	CAYNNNNRTG	1 cut(s)	550
SmlI	CTYRAG	2 cut(s)	437, 506
SmoI	CTYRAG	2 cut(s)	437, 506
Sse9I	AATT	3 cut(s)	16, 348, 399
SspMI	CTAG	2 cut(s)	200, 305
TaaI	ACNGT	1 cut(s)	218
TaqI	TCGA	1 cut(s)	438
TasI	AATT	3 cut(s)	16, 348, 399
Tru1I	TTAA	2 cut(s)	48, 126
Tru9I	TTAA	2 cut(s)	48, 126
TscAI	CASTG	2 cut(s)	70, 418
TseI	GCWGC	1 cut(s)	408
TspDTI	ATGAA	2 cut(s)	411, 534
TspRI	CASTG	2 cut(s)	70, 418
VpaK11BI	GGWCC	1 cut(s)	457
VspI	ATTAAT	1 cut(s)	48
XhoI	CTCGAG	1 cut(s)	437
XmiI	GTMKAC	1 cut(s)	119
XmnI	GAANNNNTTC	1 cut(s)	402
XspI	CTAG	2 cut(s)	200, 305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.