Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001485

Physical Location & Seq

Genomic Coordinates Forward (+)

382864 .. 385352

Gene Structure 2489 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G003400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1128 bp

ATCTCTCCAATGGCACCCAACCACACATCTCCTCAGGATGAGCCTCCGGAAGAAGTGGAAGCCTCATCCGAAGAAGAAGTAGACAGAGAAGAAGAGGAAGAATCCGAATCCCAGCCCGAATCCAAGTCTGAGGAACCTGAGCCAAAAGGAGCACCCACTCCTGTTGATGAGAAGAAACCACAACCGAAGAATCCGGACTTGGCTACGGTGCCGCAGTCTTCATCCCCTGGGTCCGAAAAGTGGAAGCCTCGTCTGAAGAAGAAGTTGACAGAGAAGAAGAGGAAGAATCCGGATCCGAGCTGCACTTACTATAAGAAGAAACCAGACTCGGCTATGGAAGAGACACCCAAGACCAAGAAGCCCAGATCGAATGCCTCGGCTACTACTACGTCGGCGGCAAAAGCCGGGTCGAAGCAGCCAAGTTCTAAAAATCCTATCAAGAAATTGGCCTCGGCTACTACAACACCGGCGGCAAGAGCTAGGTCGAAGCGGCCAAGCGAGAGCGACCCCAAGGATTCCAAGAGGCCCAAGAAGAAGAAGATCCCAGAGTTGGATGAGGAGCCGGACCAGGCCAGAGAGGAAACGAAGAAGGCCGGTGGAGACGACTTGAAGAAGTTGCTCCTGCTGCAGAGGATTTGGAGCGATGATGATGAGATTACGATCTTGGAAGGCATGATTGATTACTATACCAAGCAAGGGGTGCACCCAAATGCTGATATGTTTGCGTTTCATGATTTTATGAAGAAATCACTGAAGGCCGATGTGAACAAGACCCAATTGCAAGATAAGATTCGTAGGCTCAAGAAGAAGTATGAGACCGATGTGTCCAAAGGGAAGAAGTATAATCCTGTTAAGCCTCATGAGCTATGGGTTTTTGACTTGTCTAAGAAGGTATGGGGCAGCAGCGAAGGGTTATTTGCGCTCGGTGGGTTGTCTGAACAGTACAAGTGTAATGAGACGTGTGCGGGTTTGAGAGAGCTGACGTTGCTGGAGGGTTGCTTGGAGTTGATTGGAGAACCCAAGCGAGCTGAGTTGAAGGAGGAGTGGAAGAAGCTGCATGTTGCTGAATTGGAGCTTGTTATTAGAAGGGGTGAGTTGGCTAAGTTGATTCTGGAGGCATTGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0006082 GO:0006355 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016143 GO:0016592 GO:0019219 GO:0019222 GO:0019748 GO:0019757 GO:0019760 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0043565 GO:0044212 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0097159 GO:1901135 GO:1901363 GO:1901564 GO:1901657 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF573

Protein Analysis

376

Amino Acids

42.24

Weight (kDa)

8.66

Isoelectric Point (pI)

58.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11510 AT1G11510 AT1G44810 AT1G55950 AT1G61730 AT1G66420 AT2G01370 AT2G20805 AT2G25650 AT2G36340 AT3G07710 AT4G00232 AT4G00238 AT4G00250 AT4G00270 AT4G00390 AT4G00610 AT5G14280 AT5G41530 AT5G41765
fragaria_vesca	FvH4_1g25320 FvH4_3g02930 FvH4_5g33230
malus_domestica	MD05G1335900.v1.1
prunus_persica	Prupe.3G046700_v2.0.a1 Prupe.4G029400_v2.0.a1 Prupe.7G003400_v2.0.a1
pyrus_communis	pycom05g30730 pycom10g26270
rosa_chinensis	RchiOBHm_Chr5g0004541
rosa_laevigata	RLG00000022926 RLG00000031238
rosa_multiflora	Rmu_co8441915.1_g000001 Rmu_sc0000265.1_g000017 Rmu_sc0001208.1_g000073 Rmu_sc0002354.1_g000016
rosa_roxburghii	Rroxscaffold_1G00016900 Rroxscaffold_1G00070990 Rroxscaffold_6G00393920
rosa_rugosa	Rorug04G0412200
rosa_samantha	Rh3BG326200 Rh3CG323900 Rh3DG322300 Rh5AG040100 Rh5BG039500 Rh5CG043300 Rh5DG039000 Rh6CG160000
rosa_wichuraiana	Rw1G006950 Rw3G025620 Rw5G003850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	823
AccB1I	GGYRCC	2 cut(s)	13, 208
AccI	GTMKAC	1 cut(s)	81
AccIII	TCCGGA	3 cut(s)	46, 193, 289
AciI	CCGC	5 cut(s)	212, 395, 470, 490, 965
AclWI	GGATC	3 cut(s)	287, 300, 535
AcoI	YGGCCR	1 cut(s)	491
AcuI	CTGAAG	2 cut(s)	275, 773
AfaI	GTAC	1 cut(s)	944
AfiI	CCNNNNNNNGG	3 cut(s)	240, 550, 696
AflIII	ACRYGT	1 cut(s)	959
AgsI	TTSAA	3 cut(s)	610, 1036, 1123
AjiI	CACGTC	1 cut(s)	960
AjnI	CCWGG	2 cut(s)	226, 567
AjuI	GAANNNNNNNTTGG	2 cut(s)	182, 214
AluBI	AGCT	7 cut(s)	300, 479, 865, 979, 1028, 1054, 1075
AluI	AGCT	7 cut(s)	300, 479, 865, 979, 1028, 1054, 1075
Alw21I	GWGCWC	2 cut(s)	154, 705
Alw26I	GTCTC	4 cut(s)	335, 594, 809, 950
Alw44I	GTGCAC	1 cut(s)	701
AlwI	GGATC	3 cut(s)	287, 300, 535
Aor13HI	TCCGGA	3 cut(s)	46, 193, 289
AoxI	GGCC	6 cut(s)	447, 491, 524, 570, 591, 756
ApaLI	GTGCAC	1 cut(s)	701
ApeKI	GCWGC	6 cut(s)	300, 415, 625, 900, 903, 1054
ArsI	GACNNNNNNTTYG	2 cut(s)	392, 424
AspLEI	GCGC	1 cut(s)	922
AspS9I	GGNCC	3 cut(s)	231, 525, 565
AsuC2I	CCSGG	1 cut(s)	406
AsuHPI	GGTGA	1 cut(s)	1103
AvaII	GGWCC	2 cut(s)	231, 565
AxyI	CCTNAGG	1 cut(s)	33
BaeGI	GKGCMC	1 cut(s)	705
BamHI	GGATCC	1 cut(s)	292
BanI	GGYRCC	2 cut(s)	13, 208
BbsI	GAAGAC	1 cut(s)	210
Bbv12I	GWGCWC	2 cut(s)	154, 705
BbvI	GCAGC	6 cut(s)	287, 427, 612, 912, 915, 1041
BciT130I	CCWGG	2 cut(s)	228, 569
BcnI	CCSGG	1 cut(s)	406
BcoDI	GTCTC	4 cut(s)	335, 594, 809, 950
BfaI	CTAG	1 cut(s)	480
BfmI	CTRYAG	1 cut(s)	626
Bme1390I	CCNGG	3 cut(s)	228, 406, 569
Bme18I	GGWCC	2 cut(s)	231, 565
BmgBI	CACGTC	1 cut(s)	960
BmgT120I	GGNCC	3 cut(s)	231, 525, 565
BmiI	GGNNCC	6 cut(s)	15, 135, 210, 232, 294, 561
BmrFI	CCNGG	3 cut(s)	228, 406, 569
BpiI	GAAGAC	1 cut(s)	210
BpmI	CTGGAG	1 cut(s)	1010
Bpu10I	CCTNAGC	1 cut(s)	138
BpuEI	CTTGAG	1 cut(s)	785
BpuMI	CCSGG	1 cut(s)	406
BsaBI	GATNNNNATC	1 cut(s)	659
BsaI	GGTCTC	1 cut(s)	809
BsaJI	CCNNGG	5 cut(s)	226, 227, 375, 450, 510
BsaWI	WCCGGW	3 cut(s)	46, 193, 289
Bsc4I	CCNNNNNNNGG	3 cut(s)	240, 550, 696
Bse118I	RCCGGY	2 cut(s)	466, 593
Bse21I	CCTNAGG	1 cut(s)	33
Bse8I	GATNNNNATC	1 cut(s)	659
BseAI	TCCGGA	3 cut(s)	46, 193, 289
BseBI	CCWGG	2 cut(s)	228, 569
BseDI	CCNNGG	5 cut(s)	226, 227, 375, 450, 510
BseGI	GGATG	4 cut(s)	43, 65, 221, 559
BseJI	GATNNNNATC	1 cut(s)	659
BseLI	CCNNNNNNNGG	3 cut(s)	240, 550, 696
BseMII	CTCAG	4 cut(s)	47, 120, 129, 1020
BseRI	GAGGAG	3 cut(s)	21, 572, 1055
BseSI	GKGCMC	1 cut(s)	705
BseXI	GCAGC	6 cut(s)	287, 427, 612, 912, 915, 1041
BseYI	CCCAGC	1 cut(s)	111
BsgI	GTGCAG	1 cut(s)	286
BshFI	GGCC	6 cut(s)	449, 493, 526, 572, 593, 758
BshNI	GGYRCC	2 cut(s)	13, 208
BsiHKAI	GWGCWC	2 cut(s)	154, 705
BsiSI	CCGG	7 cut(s)	47, 194, 290, 405, 467, 563, 594
BslI	CCNNNNNNNGG	3 cut(s)	240, 550, 696
BsmAI	GTCTC	4 cut(s)	335, 594, 809, 950
BsmBI	CGTCTC	2 cut(s)	594, 950
BsmI	GAATGC	1 cut(s)	376
BsnI	GGCC	6 cut(s)	449, 493, 526, 572, 593, 758
Bso31I	GGTCTC	1 cut(s)	809
Bsp1286I	GDGCHC	2 cut(s)	154, 705
Bsp13I	TCCGGA	3 cut(s)	46, 193, 289
Bsp143I	GATC	4 cut(s)	292, 365, 540, 660
BspACI	CCGC	5 cut(s)	212, 395, 470, 490, 965
BspANI	GGCC	6 cut(s)	449, 493, 526, 572, 593, 758
BspCNI	CTCAG	4 cut(s)	46, 121, 130, 1021
BspEI	TCCGGA	3 cut(s)	46, 193, 289
BspHI	TCATGA	2 cut(s)	730, 859
BspLI	GGNNCC	6 cut(s)	15, 135, 210, 232, 294, 561
BspMAI	CTGCAG	1 cut(s)	630
BspPI	GGATC	3 cut(s)	287, 300, 535
BspT107I	GGYRCC	2 cut(s)	13, 208
BspTNI	GGTCTC	1 cut(s)	809
BsrFI	RCCGGY	2 cut(s)	466, 593
BssAI	RCCGGY	2 cut(s)	466, 593
BssECI	CCNNGG	5 cut(s)	226, 227, 375, 450, 510
BssMI	GATC	4 cut(s)	292, 365, 540, 660
BssT1I	CCWWGG	1 cut(s)	510
Bst2UI	CCWGG	2 cut(s)	228, 569
Bst4CI	ACNGT	2 cut(s)	208, 942
Bst6I	CTCTTC	3 cut(s)	87, 272, 333
BstAPI	GCANNNNNTGC	1 cut(s)	700
BstC8I	GCNNGC	1 cut(s)	1026
BstDEI	CTNAG	6 cut(s)	33, 129, 138, 885, 1029, 1101
BstF5I	GGATG	4 cut(s)	43, 65, 221, 559
BstHHI	GCGC	1 cut(s)	922
BstKTI	GATC	4 cut(s)	295, 368, 543, 663
BstMAI	GTCTC	4 cut(s)	335, 594, 809, 950
BstMBI	GATC	4 cut(s)	292, 365, 540, 660
BstMWI	GCNNNNNNNGC	6 cut(s)	401, 476, 625, 700, 862, 985
BstNI	CCWGG	2 cut(s)	228, 569
BstNSI	RCATGY	1 cut(s)	1061
BstSCI	CCNGG	3 cut(s)	226, 404, 567
BstSFI	CTRYAG	1 cut(s)	626
BstSLI	GKGCMC	1 cut(s)	705
BstV1I	GCAGC	6 cut(s)	287, 427, 612, 912, 915, 1041
BstV2I	GAAGAC	1 cut(s)	210
BstX2I	RGATCY	2 cut(s)	292, 540
BstYI	RGATCY	2 cut(s)	292, 540
Bsu36I	CCTNAGG	1 cut(s)	33
BsuRI	GGCC	6 cut(s)	449, 493, 526, 572, 593, 758
BtgZI	GCGATG	1 cut(s)	657
BtrI	CACGTC	1 cut(s)	960
BtsCI	GGATG	4 cut(s)	43, 65, 221, 559
BtsIMutI	CAGTG	1 cut(s)	749
Cac8I	GCNNGC	1 cut(s)	1026
CciI	TCATGA	2 cut(s)	730, 859
CfoI	GCGC	1 cut(s)	922
Cfr10I	RCCGGY	2 cut(s)	466, 593
Cfr13I	GGNCC	3 cut(s)	231, 525, 565
Csp6I	GTAC	1 cut(s)	943
CspCI	CAANNNNNGTGG	2 cut(s)	145, 180
CviAII	CATG	4 cut(s)	673, 731, 860, 1058
CviQI	GTAC	1 cut(s)	943
DdeI	CTNAG	6 cut(s)	33, 129, 138, 885, 1029, 1101
DpnI	GATC	4 cut(s)	294, 367, 542, 662
DpnII	GATC	4 cut(s)	292, 365, 540, 660
DrdI	GACNNNNNNGTC	1 cut(s)	823
DseDI	GACNNNNNNGTC	1 cut(s)	823
EaeI	YGGCCR	1 cut(s)	491
Eam1104I	CTCTTC	3 cut(s)	87, 272, 333
EarI	CTCTTC	3 cut(s)	87, 272, 333
Eco130I	CCWWGG	1 cut(s)	510
Eco31I	GGTCTC	1 cut(s)	809
Eco47I	GGWCC	2 cut(s)	231, 565
Eco57I	CTGAAG	2 cut(s)	275, 773
Eco81I	CCTNAGG	1 cut(s)	33
EcoRII	CCWGG	2 cut(s)	226, 567
EcoT14I	CCWWGG	1 cut(s)	510
ErhI	CCWWGG	1 cut(s)	510
Esp3I	CGTCTC	2 cut(s)	594, 950
FaeI	CATG	4 cut(s)	676, 734, 863, 1061
FatI	CATG	4 cut(s)	672, 730, 859, 1057
FauI	CCCGC	1 cut(s)	958
FblI	GTMKAC	1 cut(s)	81
FokI	GGATG	4 cut(s)	50, 52, 208, 566
FspBI	CTAG	1 cut(s)	480
GlaI	GCGC	1 cut(s)	921
GsaI	CCCAGC	1 cut(s)	115
GsuI	CTGGAG	1 cut(s)	1010
HaeIII	GGCC	6 cut(s)	449, 493, 526, 572, 593, 758
HapII	CCGG	7 cut(s)	47, 194, 290, 405, 467, 563, 594
HhaI	GCGC	1 cut(s)	922
Hin1II	CATG	4 cut(s)	676, 734, 863, 1061
Hin6I	GCGC	1 cut(s)	920
HinP1I	GCGC	1 cut(s)	920
HincII	GTYRAC	1 cut(s)	267
HindII	GTYRAC	1 cut(s)	267
HinfI	GANTC	9 cut(s)	101, 107, 119, 190, 286, 326, 515, 790, 1108
HpaII	CCGG	7 cut(s)	47, 194, 290, 405, 467, 563, 594
HphI	GGTGA	1 cut(s)	1103
Hpy166II	GTNNAC	4 cut(s)	82, 267, 703, 766
Hpy188I	TCNGA	7 cut(s)	70, 106, 130, 235, 255, 297, 937
Hpy188III	TCNNGA	9 cut(s)	35, 47, 194, 290, 439, 731, 802, 860, 1112
Hpy8I	GTNNAC	4 cut(s)	82, 267, 703, 766
Hpy99I	CGWCG	1 cut(s)	394
HpyAV	CCTTC	7 cut(s)	583, 662, 748, 883, 902, 1030, 1080
HpyCH4III	ACNGT	2 cut(s)	208, 942
HpyCH4IV	ACGT	3 cut(s)	389, 959, 983
HpyCH4V	TGCA	5 cut(s)	303, 628, 703, 781, 1057
HpyF10VI	GCNNNNNNNGC	6 cut(s)	401, 476, 625, 700, 862, 985
HpyF3I	CTNAG	6 cut(s)	33, 129, 138, 885, 1029, 1101
HpySE526I	ACGT	3 cut(s)	389, 959, 983
Hsp92II	CATG	4 cut(s)	676, 734, 863, 1061
HspAI	GCGC	1 cut(s)	920
Kpn2I	TCCGGA	3 cut(s)	46, 193, 289
Kzo9I	GATC	4 cut(s)	292, 365, 540, 660
LmnI	GCTCC	5 cut(s)	149, 559, 624, 639, 1072
Lsp1109I	GCAGC	6 cut(s)	287, 427, 612, 912, 915, 1041
MaeI	CTAG	1 cut(s)	480
MaeII	ACGT	3 cut(s)	389, 959, 983
MalI	GATC	4 cut(s)	294, 367, 542, 662
MboI	GATC	4 cut(s)	292, 365, 540, 660
MfeI	CAATTG	1 cut(s)	776
MflI	RGATCY	2 cut(s)	292, 540
MhlI	GDGCHC	2 cut(s)	154, 705
MluCI	AATT	3 cut(s)	443, 776, 1067
MlyI	GAGTC	1 cut(s)	320
MmeI	TCCRAC	1 cut(s)	531
MroI	TCCGGA	3 cut(s)	46, 193, 289
MseI	TTAA	1 cut(s)	852
MslI	CAYNNNNRTG	2 cut(s)	708, 1123
MspI	CCGG	7 cut(s)	47, 194, 290, 405, 467, 563, 594
MspR9I	CCNGG	3 cut(s)	228, 406, 569
MunI	CAATTG	1 cut(s)	776
Mva1269I	GAATGC	1 cut(s)	376
MvaI	CCWGG	2 cut(s)	228, 569
MwoI	GCNNNNNNNGC	6 cut(s)	401, 476, 625, 700, 862, 985
NciI	CCSGG	1 cut(s)	406
NdeII	GATC	4 cut(s)	292, 365, 540, 660
NlaIII	CATG	4 cut(s)	676, 734, 863, 1061
NlaIV	GGNNCC	6 cut(s)	15, 135, 210, 232, 294, 561
NmeAIII	GCCGAG	3 cut(s)	308, 356, 431
NspI	RCATGY	1 cut(s)	1061
PagI	TCATGA	2 cut(s)	730, 859
PasI	CCCWGGG	1 cut(s)	227
PctI	GAATGC	1 cut(s)	376
PfeI	GAWTC	8 cut(s)	101, 107, 119, 190, 286, 515, 790, 1108
PleI	GAGTC	1 cut(s)	320
PpsI	GAGTC	1 cut(s)	320
Psp6I	CCWGG	2 cut(s)	226, 567
PspFI	CCCAGC	1 cut(s)	111
PspGI	CCWGG	2 cut(s)	226, 567
PspN4I	GGNNCC	6 cut(s)	15, 135, 210, 232, 294, 561
PspPI	GGNCC	3 cut(s)	231, 525, 565
PstI	CTGCAG	1 cut(s)	630
PsuI	RGATCY	2 cut(s)	292, 540
RsaI	GTAC	1 cut(s)	944
RsaNI	GTAC	1 cut(s)	943
RseI	CAYNNNNRTG	2 cut(s)	708, 1123
SaqAI	TTAA	1 cut(s)	852
Sau3AI	GATC	4 cut(s)	292, 365, 540, 660
Sau96I	GGNCC	3 cut(s)	231, 525, 565
SchI	GAGTC	1 cut(s)	320
ScrFI	CCNGG	3 cut(s)	228, 406, 569
SduI	GDGCHC	2 cut(s)	154, 705
SfcI	CTRYAG	1 cut(s)	626
SgrAI	CRCCGGYG	1 cut(s)	466
SinI	GGWCC	2 cut(s)	231, 565
SmiMI	CAYNNNNRTG	2 cut(s)	708, 1123
SmlI	CTYRAG	1 cut(s)	800
SmoI	CTYRAG	1 cut(s)	800
Sse9I	AATT	3 cut(s)	443, 776, 1067
SsiI	CCGC	5 cut(s)	212, 395, 470, 490, 965
SspMI	CTAG	1 cut(s)	480
StyD4I	CCNGG	3 cut(s)	226, 404, 567
StyI	CCWWGG	1 cut(s)	510
TaaI	ACNGT	2 cut(s)	208, 942
TaiI	ACGT	3 cut(s)	392, 962, 986
TaqI	TCGA	3 cut(s)	368, 410, 485
TaqII	GACCGA	1 cut(s)	833
TasI	AATT	3 cut(s)	443, 776, 1067
TatI	WGTACW	1 cut(s)	942
TauI	GCSGC	4 cut(s)	214, 398, 473, 493
TfiI	GAWTC	8 cut(s)	101, 107, 119, 190, 286, 515, 790, 1108
Tru1I	TTAA	1 cut(s)	852
Tru9I	TTAA	1 cut(s)	852
TscAI	CASTG	1 cut(s)	756
TseI	GCWGC	6 cut(s)	300, 415, 625, 900, 903, 1054
TspDTI	ATGAA	3 cut(s)	210, 719, 755
TspRI	CASTG	1 cut(s)	756
VneI	GTGCAC	1 cut(s)	701
VpaK11BI	GGWCC	2 cut(s)	231, 565
XceI	RCATGY	1 cut(s)	1061
XmiI	GTMKAC	1 cut(s)	81
XspI	CTAG	1 cut(s)	480

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.