Prupe.8G263900_v2.0.a1

pectinesterase pectinesterase inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000522
Physical Location & Seq
Reverse (-)
22159222 .. 22161846
2625 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G263900.1

Sequence Viewer

Length: 1683 bp
ATGGCTTATTCTAAGCTCATCATTGCTTCATTTTTCATCCTTTTTCCTTTATTTTCCTCTCTATCTTTGGCTGCGGATAACTCTTCAAGCCCAGTCTCTGCAGGCACCATTTGCAAGTCCACCCCTGACCCTTCTTTTTGCAAATCTGTGCTTCCTCACAACCAAACTGCTGAAAATGTTTACTACTACGGCCGGTTCTCGGTCCGGAAATCGTTATCTCAGTCCCGTAAATTCTTAAACTTAGTCGACAAATATCTTAAACGCCGGTCCAGTTTGTCCCTGACCGCAGTCCGTGCTCTAGAAGACTGCAGGTTGCTTGCCGGGCTCAACATGGACTTTTTGCTAAACAGTTTTGAAACCGTCAATAAGACTAGCAAGACTCTCTCTAATCTCAAAGCAGACGACGTCCAAACTTCTCTTAGCGCCATTCTCACCAACCAGCAAACCTGTTTGGACGGCATTCAATCCACAGCTTCTGCTTGGAGTTTGAAAACTGGCCTCTCTGCACCCAACGACACCAAGTTCTACAGCGTCTCCCTTGCCCTTTTCACCAAGGGTTGGGTGCCCAAGAAGAAGAAATCTGCTACGTGGAAGCCCACCAGGAAGCAGCGAGGCTTCAAAAACGGACGCCTGCCGCTCAAAATGTCGAGCCGAACACGTGCCGTTTACGAGGGCGTCACCAAGAGAAAGCTGCTTCAAACGGAGACGGAGGATGATGGGGTTTTGGTGAGTGAAGTCGTGACGGTGAGCCAGAATGGAACCGGAAACTTCTCCACCATCAATGACGCCATTGCTGCAGCCCCAAACAACTCTGCCTCAACTAACGGCTACTTCTTGATCTATGTCACCGCTGGTGTTTATGAAGAGTACGTCTCCATTGCTAAAAATAAGAGGTATTTGATGATGGTCGGGGACGGCATCAACCAGACCATTCTCACCGGCAACCGAAGCGTCGTTGATGGGTGGACAACTTTCAACTCTGCAACATTTGCTGTAACTGCACCTGGATTTGTAGCAGTGAACATGACCTTCCGTAACACTGCGGGAGCAATCAAGCACCAAGCGGTTGCAGTTCGAAACGGTGCTGATCTGTCCACATTCTATAGCTGCAGCTTCGAAGCGTACCAAGACACCTTATACACGCATTCTCTGAGGCAATTCTATAGAGAATGCGACATCTATGGCACGGTAGACTTCATATTTGGAAATGCTGCAGTTGTTTTCCAAAATTGCAACTTATATCCCAGGCTGCCAATGAGTGGCCAATTCAATGCCATCACAGCTCAGGGTCGAACCGATCCGAATCAAAACACGGGCACTTCGATTCACAATTGTACTATAAGGGCTGCTGACGATTTGGCCTCGAGCAACAGCAGTACCAAGACTTATCTGGGAAGGCCATGGAAGGAATATTCAAGGACAGTTTATATGCAGTCTTACATTGATAGTGTGGTGGATCCTGCTGGTTGGCGGGCATGGGATGGAGAGTTTGCTCTCAGCACATTGTATTATGCAGAGTATAACAACACCGGTCCCGGATCAAACACTACAAGCAGAGTTACATGGCCAGGTTACCATGTGATTAATGCTACCGATGCTGCTAATTTCACGGTGACCAATTTCTTGCTGGGGGATGATTGGTTGCCTCAAACAGGGGTGCCCTACACTGGTGGCTTAATTTGA

Protein Analysis

561

Amino Acids

61.62

Weight (kDa)

9.18

Isoelectric Point (pI)

30.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000522)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02810 AT2G47550 AT4G02330
fragaria_vesca FvH4_2g25960 FvH4_2g25960 FvH4_2g25970 FvH4_5g35570 FvH4_5g35580 FvH4_5g35590
malus_domestica MD03G1290900.v1.1 MD03G1291000.v1.1 MD08G1195600.v1.1 MD11G1307400.v1.1 MD11G1307500.v1.1
prunus_persica Prupe.1G529400_v2.0.a1 Prupe.1G529500_v2.0.a1 Prupe.8G263900_v2.0.a1 Prupe.8G264000_v2.0.a1
pyrus_communis pycom08g16800
rosa_chinensis RchiOBHm_Chr6g0294321 RchiOBHm_Chr6g0294331 RchiOBHm_Chr7g0236951 RchiOBHm_Chr7g0236971 RchiOBHm_Chr7g0237041 RchiOBHm_Chr7g0237051
rosa_laevigata RLG00000001034 RLG00000001035 RLG00000001039 RLG00000001043 RLG00000001045 RLG00000011880 RLG00000011881 RLG00000034181
rosa_multiflora Rmu_co8086188.1_g000001 Rmu_co8458485.1_g000001 Rmu_sc0000272.1_g000007 Rmu_sc0000272.1_g000009 Rmu_sc0002131.1_g000030 Rmu_sc0002131.1_g000037 Rmu_sc0005369.1_g000005 Rmu_sc0005369.1_g000008 Rmu_sc0007991.1_g000005 Rmu_sc0007991.1_g000013 Rmu_sc0033563.1_g000001
rosa_roxburghii Rroxscaffold_3G00224540 Rroxscaffold_3G00224600 Rroxscaffold_3G00224650 Rroxscaffold_3G00224660 Rroxscaffold_7G00173470 Rroxscaffold_7G00173480
rosa_rugosa Rorug06G0243400 Rorug06G0243500 Rorug07G0301200 Rorug07G0301500 Rorug07G0301600
rosa_samantha Rh6AG356000 Rh6AG356100 Rh6BG362600 Rh6BG362800 Rh6CG370000 Rh6CG370100 Rh6DG356500 Rh6DG356600 Rh7AG456200 Rh7AG456500 Rh7AG457500 Rh7AG457600 Rh7BG427500 Rh7BG427700 Rh7BG428400 Rh7BG428500 Rh7CG475100 Rh7CG475300 Rh7CG475700 Rh7CG475800 Rh7DG444100 Rh7DG444300 Rh7DG444700 Rh7DG444900
rosa_wichuraiana Rw6G031020 Rw6G031030 Rw7G037870 Rw7G037880 Rw7G037920 Rw7G037940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 408
Acc36I ACCTGC 1 cut(s) 300
AccB1I GGYRCC 3 cut(s) 104, 562, 1657
AccB7I CCANNNNNTGG 2 cut(s) 558, 1259
AccBSI CCGCTC 1 cut(s) 637
AccI GTMKAC 2 cut(s) 246, 1191
AccIII TCCGGA 1 cut(s) 204
AciI CCGC 7 cut(s) 74, 285, 635, 849, 1043, 1064, 1471
AclWI GGATC 4 cut(s) 1292, 1451, 1464, 1546
AcoI YGGCCR 3 cut(s) 190, 1261, 1565
AcsI RAATTY 1 cut(s) 230
AcvI CACGTG 1 cut(s) 659
AcyI GRCGYC 4 cut(s) 405, 628, 675, 786
AfaI GTAC 4 cut(s) 869, 1124, 1336, 1378
AfiI CCNNNNNNNGG 5 cut(s) 199, 558, 1259, 1652, 1667
AflIII ACRYGT 1 cut(s) 656
AgeI ACCGGT 1 cut(s) 1529
AgsI TTSAA 9 cut(s) 87, 356, 464, 490, 619, 698, 976, 1270, 1416
AjnI CCWGG 4 cut(s) 599, 1003, 1244, 1567
AluBI AGCT 6 cut(s) 16, 473, 691, 1107, 1113, 1283
AluI AGCT 6 cut(s) 16, 473, 691, 1107, 1113, 1283
Alw21I GWGCWC 1 cut(s) 298
Alw26I GTCTC 4 cut(s) 100, 538, 698, 877
AlwI GGATC 4 cut(s) 1292, 1451, 1464, 1546
AlwNI CAGNNNCTG 2 cut(s) 98, 476
Ama87I CYCGRG 1 cut(s) 1363
Aor13HI TCCGGA 1 cut(s) 204
AoxI GGCC 6 cut(s) 190, 496, 1261, 1359, 1397, 1565
ApoI RAATTY 1 cut(s) 230
ArsI GACNNNNNNTTYG 2 cut(s) 1184, 1216
AseI ATTAAT 1 cut(s) 1584
AsiGI ACCGGT 1 cut(s) 1529
AspLEI GCGC 1 cut(s) 425
AspS9I GGNCC 3 cut(s) 202, 267, 1532
AsuC2I CCSGG 2 cut(s) 322, 1536
AsuHPI GGTGA 8 cut(s) 424, 541, 670, 739, 757, 838, 928, 1624
AsuII TTCGAA 2 cut(s) 1075, 1116
AvaI CYCGRG 1 cut(s) 1363
AvaII GGWCC 3 cut(s) 202, 267, 1532
BaeGI GKGCMC 3 cut(s) 567, 1319, 1662
BaeI ACNNNNGTAYC 2 cut(s) 1360, 1393
BalI TGGCCA 2 cut(s) 1263, 1567
BamHI GGATCC 1 cut(s) 1456
BanI GGYRCC 3 cut(s) 104, 562, 1657
BanII GRGCYC 1 cut(s) 327
BbrPI CACGTG 1 cut(s) 659
BbsI GAAGAC 1 cut(s) 309
Bbv12I GWGCWC 1 cut(s) 298
BccI CCATC 6 cut(s) 710, 785, 898, 953, 1283, 1475
BceAI ACGGC 5 cut(s) 205, 472, 647, 841, 931
BciT130I CCWGG 4 cut(s) 601, 1005, 1246, 1569
BcnI CCSGG 2 cut(s) 322, 1536
BcoDI GTCTC 4 cut(s) 100, 538, 698, 877
BfaI CTAG 2 cut(s) 299, 372
BfmI CTRYAG 8 cut(s) 99, 307, 526, 795, 1102, 1108, 1162, 1212
BfoI RGCGCY 1 cut(s) 426
BfuAI ACCTGC 1 cut(s) 300
Bme1390I CCNGG 6 cut(s) 322, 601, 1005, 1246, 1536, 1569
Bme18I GGWCC 3 cut(s) 202, 267, 1532
BmeT110I CYCGRG 1 cut(s) 1363
BmgT120I GGNCC 3 cut(s) 202, 267, 1532
BmiI GGNNCC 6 cut(s) 106, 564, 760, 1458, 1534, 1659
BmrFI CCNGG 6 cut(s) 322, 601, 1005, 1246, 1536, 1569
BmrI ACTGGG 1 cut(s) 86
BmsI GCATC 2 cut(s) 927, 1585
BmuI ACTGGG 1 cut(s) 86
BoxI GACNNNNGTC 1 cut(s) 287
BpiI GAAGAC 1 cut(s) 309
BplI GAGNNNNNCTC 2 cut(s) 857, 889
Bpu10I CCTNAGC 1 cut(s) 1284
Bpu14I TTCGAA 2 cut(s) 1075, 1116
BpuMI CCSGG 2 cut(s) 322, 1536
BsaAI YACGTR 2 cut(s) 588, 659
BsaBI GATNNNNATC 1 cut(s) 1302
BsaHI GRCGYC 4 cut(s) 405, 628, 675, 786
BsaJI CCNNGG 3 cut(s) 552, 1244, 1400
BsaWI WCCGGW 3 cut(s) 204, 761, 1529
BsaXI ACNNNNNCTCC 2 cut(s) 518, 548
Bsc4I CCNNNNNNNGG 5 cut(s) 199, 558, 1259, 1652, 1667
Bse118I RCCGGY 4 cut(s) 192, 264, 938, 1529
Bse1I ACTGG 4 cut(s) 92, 270, 499, 1672
Bse3DI GCAATG 3 cut(s) 21, 789, 876
Bse8I GATNNNNATC 1 cut(s) 1302
BseAI TCCGGA 1 cut(s) 204
BseBI CCWGG 4 cut(s) 601, 1005, 1246, 1569
BseDI CCNNGG 3 cut(s) 552, 1244, 1400
BseGI GGATG 4 cut(s) 36, 718, 1486, 1639
BseJI GATNNNNATC 1 cut(s) 1302
BseLI CCNNNNNNNGG 5 cut(s) 199, 558, 1259, 1652, 1667
BseMI GCAATG 3 cut(s) 21, 789, 876
BseMII CTCAG 4 cut(s) 233, 1142, 1298, 1510
BseNI ACTGG 4 cut(s) 92, 270, 499, 1672
BseSI GKGCMC 3 cut(s) 567, 1319, 1662
BseX3I CGGCCG 1 cut(s) 190
BseYI CCCAGC 1 cut(s) 1627
BsgI GTGCAG 2 cut(s) 489, 984
Bsh1285I CGRYCG 1 cut(s) 193
BshFI GGCC 6 cut(s) 192, 498, 1263, 1361, 1399, 1567
BshNI GGYRCC 3 cut(s) 104, 562, 1657
BshTI ACCGGT 1 cut(s) 1529
BsiEI CGRYCG 1 cut(s) 193
BsiHKAI GWGCWC 1 cut(s) 298
BsiHKCI CYCGRG 1 cut(s) 1363
BsiSI CCGG 8 cut(s) 193, 205, 265, 321, 762, 939, 1530, 1536
BslFI GGGAC 4 cut(s) 208, 262, 926, 1518
BslI CCNNNNNNNGG 5 cut(s) 199, 558, 1259, 1652, 1667
BsmAI GTCTC 4 cut(s) 100, 538, 698, 877
BsmBI CGTCTC 3 cut(s) 538, 698, 877
BsmFI GGGAC 4 cut(s) 208, 262, 926, 1518
BsmI GAATGC 3 cut(s) 459, 1144, 1175
BsnI GGCC 6 cut(s) 192, 498, 1263, 1361, 1399, 1567
BsoBI CYCGRG 1 cut(s) 1363
Bsp119I TTCGAA 2 cut(s) 1075, 1116
Bsp1286I GDGCHC 5 cut(s) 298, 327, 567, 1319, 1662
Bsp13I TCCGGA 1 cut(s) 204
Bsp143I GATC 5 cut(s) 837, 1087, 1297, 1456, 1538
Bsp19I CCATGG 1 cut(s) 1400
BspACI CCGC 7 cut(s) 74, 285, 635, 849, 1043, 1064, 1471
BspANI GGCC 6 cut(s) 192, 498, 1263, 1361, 1399, 1567
BspCNI CTCAG 4 cut(s) 232, 1143, 1297, 1509
BspEI TCCGGA 1 cut(s) 204
BspLI GGNNCC 6 cut(s) 106, 564, 760, 1458, 1534, 1659
BspMAI CTGCAG 5 cut(s) 103, 311, 799, 1112, 1216
BspMI ACCTGC 1 cut(s) 300
BspPI GGATC 4 cut(s) 1292, 1451, 1464, 1546
BspT104I TTCGAA 2 cut(s) 1075, 1116
BspT107I GGYRCC 3 cut(s) 104, 562, 1657
BsrBI CCGCTC 1 cut(s) 637
BsrDI GCAATG 3 cut(s) 21, 789, 876
BsrFI RCCGGY 4 cut(s) 192, 264, 938, 1529
BsrI ACTGG 4 cut(s) 92, 270, 499, 1672
BssAI RCCGGY 4 cut(s) 192, 264, 938, 1529
BssECI CCNNGG 3 cut(s) 552, 1244, 1400
BssMI GATC 5 cut(s) 837, 1087, 1297, 1456, 1538
BssNI GRCGYC 4 cut(s) 405, 628, 675, 786
BssT1I CCWWGG 2 cut(s) 552, 1400
Bst2UI CCWGG 4 cut(s) 601, 1005, 1246, 1569
Bst4CI ACNGT 7 cut(s) 350, 361, 745, 1082, 1189, 1423, 1612
Bst6I CTCTTC 2 cut(s) 88, 858
BstACI GRCGYC 4 cut(s) 405, 628, 675, 786
BstAPI GCANNNNNTGC 3 cut(s) 111, 293, 989
BstBAI YACGTR 2 cut(s) 588, 659
BstBI TTCGAA 2 cut(s) 1075, 1116
BstC8I GCNNGC 4 cut(s) 103, 318, 632, 1473
BstDEI CTNAG 7 cut(s) 12, 219, 241, 419, 1151, 1284, 1496
BstDSI CCRYGG 1 cut(s) 1400
BstEII GGTNACC 2 cut(s) 1571, 1612
BstENI CCTNNNNNAGG 1 cut(s) 1650
BstF5I GGATG 4 cut(s) 36, 718, 1486, 1639
BstH2I RGCGCY 1 cut(s) 426
BstHHI GCGC 1 cut(s) 425
BstKTI GATC 5 cut(s) 840, 1090, 1300, 1459, 1541
BstMAI GTCTC 4 cut(s) 100, 538, 698, 877
BstMBI GATC 5 cut(s) 837, 1087, 1297, 1456, 1538
BstMCI CGRYCG 1 cut(s) 193
BstMWI GCNNNNNNNGC 9 cut(s) 111, 293, 322, 794, 948, 989, 998, 1280, 1595
BstNI CCWGG 4 cut(s) 601, 1005, 1246, 1569
BstPAI GACNNNNGTC 1 cut(s) 287
BstPI GGTNACC 2 cut(s) 1571, 1612
BstSCI CCNGG 6 cut(s) 320, 599, 1003, 1244, 1534, 1567
BstSFI CTRYAG 8 cut(s) 99, 307, 526, 795, 1102, 1108, 1162, 1212
BstSLI GKGCMC 3 cut(s) 567, 1319, 1662
BstV2I GAAGAC 1 cut(s) 309
BstX2I RGATCY 1 cut(s) 1456
BstYI RGATCY 1 cut(s) 1456
BstZI CGGCCG 1 cut(s) 190
BsuRI GGCC 6 cut(s) 192, 498, 1263, 1361, 1399, 1567
BtgI CCRYGG 1 cut(s) 1400
BtsCI GGATG 4 cut(s) 36, 718, 1486, 1639
BtsI GCAGTG 2 cut(s) 1023, 1038
BtsIMutI CAGTG 3 cut(s) 1023, 1038, 1665
BveI ACCTGC 1 cut(s) 300
Cac8I GCNNGC 4 cut(s) 103, 318, 632, 1473
CaiI CAGNNNCTG 2 cut(s) 98, 476
CfoI GCGC 1 cut(s) 425
Cfr10I RCCGGY 4 cut(s) 192, 264, 938, 1529
Cfr13I GGNCC 3 cut(s) 202, 267, 1532
CpoI CGGWCCG 1 cut(s) 202
CseI GACGC 5 cut(s) 520, 636, 664, 794, 940
Csp6I GTAC 4 cut(s) 868, 1123, 1335, 1377
CspAI ACCGGT 1 cut(s) 1529
CspI CGGWCCG 1 cut(s) 202
CviAII CATG 6 cut(s) 331, 1024, 1401, 1476, 1563, 1577
CviQI GTAC 4 cut(s) 868, 1123, 1335, 1377
DdeI CTNAG 7 cut(s) 12, 219, 241, 419, 1151, 1284, 1496
DpnI GATC 5 cut(s) 839, 1089, 1299, 1458, 1540
DpnII GATC 5 cut(s) 837, 1087, 1297, 1456, 1538
EaeI YGGCCR 3 cut(s) 190, 1261, 1565
EagI CGGCCG 1 cut(s) 190
Eam1104I CTCTTC 2 cut(s) 88, 858
EarI CTCTTC 2 cut(s) 88, 858
EclXI CGGCCG 1 cut(s) 190
Eco130I CCWWGG 2 cut(s) 552, 1400
Eco24I GRGCYC 1 cut(s) 327
Eco47I GGWCC 3 cut(s) 202, 267, 1532
Eco52I CGGCCG 1 cut(s) 190
Eco72I CACGTG 1 cut(s) 659
Eco88I CYCGRG 1 cut(s) 1363
Eco91I GGTNACC 2 cut(s) 1571, 1612
EcoNI CCTNNNNNAGG 1 cut(s) 1650
EcoO65I GGTNACC 2 cut(s) 1571, 1612
EcoRII CCWGG 4 cut(s) 599, 1003, 1244, 1567
EcoT14I CCWWGG 2 cut(s) 552, 1400
EcoT38I GRGCYC 1 cut(s) 327
ErhI CCWWGG 2 cut(s) 552, 1400
Esp3I CGTCTC 3 cut(s) 538, 698, 877
FaeI CATG 6 cut(s) 334, 1027, 1404, 1479, 1566, 1580
FaqI GGGAC 4 cut(s) 208, 262, 926, 1518
FatI CATG 6 cut(s) 330, 1023, 1400, 1475, 1562, 1576
FauI CCCGC 2 cut(s) 1036, 1464
FblI GTMKAC 2 cut(s) 246, 1191
FokI GGATG 4 cut(s) 23, 725, 1493, 1646
FriOI GRGCYC 1 cut(s) 327
FspBI CTAG 2 cut(s) 299, 372
GlaI GCGC 1 cut(s) 424
GsaI CCCAGC 1 cut(s) 1631
HaeII RGCGCY 1 cut(s) 426
HaeIII GGCC 6 cut(s) 192, 498, 1263, 1361, 1399, 1567
HapII CCGG 8 cut(s) 193, 205, 265, 321, 762, 939, 1530, 1536
HgaI GACGC 5 cut(s) 520, 636, 664, 794, 940
HhaI GCGC 1 cut(s) 425
Hin1I GRCGYC 4 cut(s) 405, 628, 675, 786
Hin1II CATG 6 cut(s) 334, 1027, 1404, 1479, 1566, 1580
Hin6I GCGC 1 cut(s) 423
HinP1I GCGC 1 cut(s) 423
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HinfI GANTC 3 cut(s) 379, 1303, 1324
HpaII CCGG 8 cut(s) 193, 205, 265, 321, 762, 939, 1530, 1536
HphI GGTGA 8 cut(s) 424, 541, 670, 739, 757, 838, 928, 1624
Hpy166II GTNNAC 8 cut(s) 120, 181, 247, 667, 966, 1021, 1095, 1192
Hpy188I TCNGA 2 cut(s) 1152, 1302
Hpy188III TCNNGA 4 cut(s) 205, 299, 739, 835
Hpy8I GTNNAC 8 cut(s) 120, 181, 247, 667, 966, 1021, 1095, 1192
Hpy99I CGWCG 2 cut(s) 407, 956
HpyAV CCTTC 4 cut(s) 141, 1039, 1389, 1399
HpyCH4III ACNGT 7 cut(s) 350, 361, 745, 1082, 1189, 1423, 1612
HpyCH4IV ACGT 4 cut(s) 405, 587, 658, 870
HpyF10VI GCNNNNNNNGC 9 cut(s) 111, 293, 322, 794, 948, 989, 998, 1280, 1595
HpyF3I CTNAG 7 cut(s) 12, 219, 241, 419, 1151, 1284, 1496
HpySE526I ACGT 4 cut(s) 405, 587, 658, 870
Hsp92I GRCGYC 4 cut(s) 405, 628, 675, 786
Hsp92II CATG 6 cut(s) 334, 1027, 1404, 1479, 1566, 1580
HspAI GCGC 1 cut(s) 423
Kpn2I TCCGGA 1 cut(s) 204
Kzo9I GATC 5 cut(s) 837, 1087, 1297, 1456, 1538
LmnI GCTCC 1 cut(s) 1046
LweI GCATC 2 cut(s) 927, 1585
MaeI CTAG 2 cut(s) 299, 372
MaeII ACGT 4 cut(s) 405, 587, 658, 870
MaeIII GTNAC 8 cut(s) 676, 739, 844, 994, 1034, 1558, 1571, 1612
MalI GATC 5 cut(s) 839, 1089, 1299, 1458, 1540
MbiI CCGCTC 1 cut(s) 637
MboI GATC 5 cut(s) 837, 1087, 1297, 1456, 1538
MboII GAAGA 5 cut(s) 75, 314, 583, 586, 875
MfeI CAATTG 1 cut(s) 1330
MflI RGATCY 1 cut(s) 1456
MhlI GDGCHC 5 cut(s) 298, 327, 567, 1319, 1662
MlsI TGGCCA 2 cut(s) 1263, 1567
MluCI AATT 8 cut(s) 230, 1157, 1228, 1265, 1330, 1603, 1618, 1677
MluNI TGGCCA 2 cut(s) 1263, 1567
MlyI GAGTC 1 cut(s) 373
Mox20I TGGCCA 2 cut(s) 1263, 1567
MroI TCCGGA 1 cut(s) 204
MscI TGGCCA 2 cut(s) 1263, 1567
MseI TTAA 4 cut(s) 236, 258, 1584, 1676
Msp20I TGGCCA 2 cut(s) 1263, 1567
MspA1I CMGCKG 1 cut(s) 851
MspI CCGG 8 cut(s) 193, 205, 265, 321, 762, 939, 1530, 1536
MspR9I CCNGG 6 cut(s) 322, 601, 1005, 1246, 1536, 1569
MunI CAATTG 1 cut(s) 1330
Mva1269I GAATGC 3 cut(s) 459, 1144, 1175
MvaI CCWGG 4 cut(s) 601, 1005, 1246, 1569
MwoI GCNNNNNNNGC 9 cut(s) 111, 293, 322, 794, 948, 989, 998, 1280, 1595
NciI CCSGG 2 cut(s) 322, 1536
NcoI CCATGG 1 cut(s) 1400
NdeII GATC 5 cut(s) 837, 1087, 1297, 1456, 1538
NlaIII CATG 6 cut(s) 334, 1027, 1404, 1479, 1566, 1580
NlaIV GGNNCC 6 cut(s) 106, 564, 760, 1458, 1534, 1659
NmuCI GTSAC 4 cut(s) 676, 739, 844, 1612
NspV TTCGAA 2 cut(s) 1075, 1116
PaeR7I CTCGAG 1 cut(s) 1363
PcsI WCGNNNNNNNCGW 1 cut(s) 1319
PctI GAATGC 3 cut(s) 459, 1144, 1175
PfeI GAWTC 2 cut(s) 1303, 1324
PflFI GACNNNGTC 1 cut(s) 404
PflMI CCANNNNNTGG 2 cut(s) 558, 1259
PfoI TCCNGGA 1 cut(s) 1534
PinAI ACCGGT 1 cut(s) 1529
PleI GAGTC 1 cut(s) 373
PmaCI CACGTG 1 cut(s) 659
PmlI CACGTG 1 cut(s) 659
PpsI GAGTC 1 cut(s) 373
Ppu21I YACGTR 2 cut(s) 588, 659
PshAI GACNNNNGTC 1 cut(s) 287
PshBI ATTAAT 1 cut(s) 1584
Psp6I CCWGG 4 cut(s) 599, 1003, 1244, 1567
PspCI CACGTG 1 cut(s) 659
PspEI GGTNACC 2 cut(s) 1571, 1612
PspFI CCCAGC 1 cut(s) 1627
PspGI CCWGG 4 cut(s) 599, 1003, 1244, 1567
PspN4I GGNNCC 6 cut(s) 106, 564, 760, 1458, 1534, 1659
PspPI GGNCC 3 cut(s) 202, 267, 1532
PspXI VCTCGAGB 1 cut(s) 1363
PstI CTGCAG 5 cut(s) 103, 311, 799, 1112, 1216
PstNI CAGNNNCTG 2 cut(s) 98, 476
PsuI RGATCY 1 cut(s) 1456
PsyI GACNNNGTC 1 cut(s) 404
RsaI GTAC 4 cut(s) 869, 1124, 1336, 1378
RsaNI GTAC 4 cut(s) 868, 1123, 1335, 1377
Rsr2I CGGWCCG 1 cut(s) 202
RsrII CGGWCCG 1 cut(s) 202
SalI GTCGAC 1 cut(s) 245
SaqAI TTAA 4 cut(s) 236, 258, 1584, 1676
Sau3AI GATC 5 cut(s) 837, 1087, 1297, 1456, 1538
Sau96I GGNCC 3 cut(s) 202, 267, 1532
SchI GAGTC 1 cut(s) 373
ScrFI CCNGG 6 cut(s) 322, 601, 1005, 1246, 1536, 1569
SduI GDGCHC 5 cut(s) 298, 327, 567, 1319, 1662
SfaNI GCATC 2 cut(s) 927, 1585
SfcI CTRYAG 8 cut(s) 99, 307, 526, 795, 1102, 1108, 1162, 1212
Sfr274I CTCGAG 1 cut(s) 1363
SfuI TTCGAA 2 cut(s) 1075, 1116
SinI GGWCC 3 cut(s) 202, 267, 1532
SlaI CTCGAG 1 cut(s) 1363
SmlI CTYRAG 1 cut(s) 1363
SmoI CTYRAG 1 cut(s) 1363
Sse9I AATT 8 cut(s) 230, 1157, 1228, 1265, 1330, 1603, 1618, 1677
SsiI CCGC 7 cut(s) 74, 285, 635, 849, 1043, 1064, 1471
SspI AATATT 1 cut(s) 1412
SspMI CTAG 2 cut(s) 299, 372
StyD4I CCNGG 6 cut(s) 320, 599, 1003, 1244, 1534, 1567
StyI CCWWGG 2 cut(s) 552, 1400
TaaI ACNGT 7 cut(s) 350, 361, 745, 1082, 1189, 1423, 1612
TaiI ACGT 4 cut(s) 408, 590, 661, 873
TaqI TCGA 7 cut(s) 246, 647, 1075, 1116, 1291, 1322, 1364
TaqII GACCGA 1 cut(s) 190
TasI AATT 8 cut(s) 230, 1157, 1228, 1265, 1330, 1603, 1618, 1677
TatI WGTACW 1 cut(s) 1334
TauI GCSGC 1 cut(s) 637
TfiI GAWTC 2 cut(s) 1303, 1324
Tru1I TTAA 4 cut(s) 236, 258, 1584, 1676
Tru9I TTAA 4 cut(s) 236, 258, 1584, 1676
TscAI CASTG 3 cut(s) 1023, 1045, 1672
TseFI GTSAC 4 cut(s) 676, 739, 844, 1612
Tsp45I GTSAC 4 cut(s) 676, 739, 844, 1612
TspDTI ATGAA 4 cut(s) 18, 25, 876, 1186
TspGWI ACGGA 5 cut(s) 281, 639, 716, 722, 1022
TspRI CASTG 3 cut(s) 1023, 1045, 1672
Tth111I GACNNNGTC 1 cut(s) 404
Van91I CCANNNNNTGG 2 cut(s) 558, 1259
VpaK11BI GGWCC 3 cut(s) 202, 267, 1532
VspI ATTAAT 1 cut(s) 1584
XagI CCTNNNNNAGG 1 cut(s) 1650
XapI RAATTY 1 cut(s) 230
XbaI TCTAGA 1 cut(s) 298
XcmI CCANNNNNNNNNTGG 2 cut(s) 1387, 1624
XhoI CTCGAG 1 cut(s) 1363
XmiI GTMKAC 2 cut(s) 246, 1191
XspI CTAG 2 cut(s) 299, 372
ZraI GACGTC 1 cut(s) 406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.