Rh7BG427700

pectinesterase pectinesterase inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000522
Physical Location & Seq
Reverse (-)
48821517 .. 48823408
1892 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG427700.1

Sequence Viewer

Length: 1701 bp
ATGGCTTCTAAGCTTTTCATCAATCCTCTTGAAACTTCATCACTATCACTATTCCTCATCATTTTCGCCTTGCTATTATCTCAATCTTTAGCTGCAGATGTTCCTCTCGGCACTTCTGTTCCGCCCGAAACCATATGCAAGTCCACTCCACACCCTTCTGTTTGCATTTCCGTCCTCCCTCACAAAAATGCCAATGTCTATGACTTTGGCCGCTTTTCAGTCCAACACTCATTCGTCCAATCCCAAAAGCTTCTGGATTTGATCAACAAATATCTTCAAGGCGGTTCCAGTTTATCACAGCCGGAAATCCAAGCCCTCGAGGATTGCAAGTCCCTTGCATTGTTAAACAATGATTTCTTGTCAAACACCCTCGAAACTGTTAACAAAACAAGTGATGTTCTTCCTAGCTCGGATGCTGATGATGTCCAAACCTTGCTCAGTGCTATCTTAACCAACCAGCAGACGTGTTCTGATGGCCTTCAATCTGTGAGTTCAGTCCAAAATGATCTCTTGGTCTCCGTCTCTAATGGTACAAATTTGTACAGTGTCTCATTAGCGTTGGTTACAAAGGGTTGGGTCCCAAAGGATCACAAAAATAATGGAACACCAAACCAGTCGAAAAAGCATCTCAGTTTCCGGAAGGGGCGATTGTCACTGAAAATGTCAAGCAAAGCGCGTGCAGTTTACGACTCCGTTATAAATCGAAGAAGGCACCTTCTTCAAGCCGGAGATGAAGAAGTTGTGGTGAAGGACATTGTGGTTGTGAGCCAAGATGGAAGTGGAAACTTTACTACCATTACTGATGCTATCAATGCTGCACCCAATAACTCTGTTGCTAGTGATGGTTACTTCTTGGTATATGTCACTGCCGGCGTTTATGAAGAGTATGTATCAATTATATCGAAAAAGAAGTACTTGTTGCTGATCGGAGACGGTATTAATCAGACGATCATCACAGGAAGCAACAGCGTTGGAGGCGGTTCAACCACCTTCAACTCTGCCACTTTAGCTGTGGTAGCACCAGGGTTTATAGCAGTCAACATAACTATTCGAAACACTGCTGGACCAAGCATGGGGCAAGCAGTTGCAGTTCGAAATGGAGCTGACTTGTCAGTTTTCTACAGCTGTAGCTTTGAGGGATACCAAGACACCTTATACACACATTCTATGAGACAATTCTACAGAGAATGTGACATCTACGGAACGGTTGATTTCATATTTGGAAATGCTGCAGTTGTTTTCCAAAACTGTAACATATACCCTCGGCAGCCCCTCAAAGGCCAATCGACTCCCATCACAGCTCAGGGTCGAACGGACCCGAATCAGAACACAGGGACTTCAATCCAGAATTGCACCATTACAGCCTCGGCTGATTTGGCTTCAAGTAACTTCACTGTCAAGACATATCTTGGGAGGCCATGGAAGGAGTATTCGCGGACGGTTTACTTGCAGAATTTCATGGATAGTTTGATTGATCCTGCTGGTTGGCTCGCATGGAGTGGAGACTTTGCACTGAGCACATTGTATTATGCCGAGTACGGTAATAGAGGACCTGGAGCCGACACTAGTAACAGAGTTACATGGCCAGGTTACCATGTGATAAATGCAAATGATGCTGAAAATTTTACAGTGTCAAACTTCGTGCTGGGGGATAGTTGGTTGCCTCAAACAGGAGTGCCTTACACTGGTGGCTTAATTTGA

Protein Analysis

566

Amino Acids

61.28

Weight (kDa)

5.79

Isoelectric Point (pI)

33.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 43 - 187 4.9e-25 Plant invertase/pectin methylesterase inhibitor
Pectinesterase PF01095 253 - 551 6.5e-137 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000522)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02810 AT2G47550 AT4G02330
fragaria_vesca FvH4_2g25960 FvH4_2g25960 FvH4_2g25970 FvH4_5g35570 FvH4_5g35580 FvH4_5g35590
malus_domestica MD03G1290900.v1.1 MD03G1291000.v1.1 MD08G1195600.v1.1 MD11G1307400.v1.1 MD11G1307500.v1.1
prunus_persica Prupe.1G529400_v2.0.a1 Prupe.1G529500_v2.0.a1 Prupe.8G263900_v2.0.a1 Prupe.8G264000_v2.0.a1
pyrus_communis pycom08g16800
rosa_chinensis RchiOBHm_Chr6g0294321 RchiOBHm_Chr6g0294331 RchiOBHm_Chr7g0236951 RchiOBHm_Chr7g0236971 RchiOBHm_Chr7g0237041 RchiOBHm_Chr7g0237051
rosa_laevigata RLG00000001034 RLG00000001035 RLG00000001039 RLG00000001043 RLG00000001045 RLG00000011880 RLG00000011881 RLG00000034181
rosa_multiflora Rmu_co8086188.1_g000001 Rmu_co8458485.1_g000001 Rmu_sc0000272.1_g000007 Rmu_sc0000272.1_g000009 Rmu_sc0002131.1_g000030 Rmu_sc0002131.1_g000037 Rmu_sc0005369.1_g000005 Rmu_sc0005369.1_g000008 Rmu_sc0007991.1_g000005 Rmu_sc0007991.1_g000013 Rmu_sc0033563.1_g000001
rosa_roxburghii Rroxscaffold_3G00224540 Rroxscaffold_3G00224600 Rroxscaffold_3G00224650 Rroxscaffold_3G00224660 Rroxscaffold_7G00173470 Rroxscaffold_7G00173480
rosa_rugosa Rorug06G0243400 Rorug06G0243500 Rorug07G0301200 Rorug07G0301500 Rorug07G0301600
rosa_samantha Rh6AG356000 Rh6AG356100 Rh6BG362600 Rh6BG362800 Rh6CG370000 Rh6CG370100 Rh6DG356500 Rh6DG356600 Rh7AG456200 Rh7AG456500 Rh7AG457500 Rh7AG457600 Rh7BG427500 Rh7BG427700 Rh7BG428400 Rh7BG428500 Rh7CG475100 Rh7CG475300 Rh7CG475700 Rh7CG475800 Rh7DG444100 Rh7DG444300 Rh7DG444700 Rh7DG444900
rosa_wichuraiana Rw6G031020 Rw6G031030 Rw7G037870 Rw7G037880 Rw7G037920 Rw7G037940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 698
AbsI CCTCGAGG 1 cut(s) 317
AccB1I GGYRCC 1 cut(s) 711
AccII CGCG 2 cut(s) 676, 1435
AccIII TCCGGA 1 cut(s) 636
AciI CCGC 5 cut(s) 122, 211, 282, 978, 1435
AclWI GGATC 2 cut(s) 594, 1469
AcoI YGGCCR 2 cut(s) 208, 1583
AcsI RAATTY 3 cut(s) 535, 1453, 1621
AfaI GTAC 4 cut(s) 532, 542, 914, 1538
AfiI CCNNNNNNNGG 4 cut(s) 1073, 1277, 1670, 1685
AflIII ACRYGT 1 cut(s) 464
AgsI TTSAA 8 cut(s) 32, 278, 482, 722, 984, 994, 1341, 1383
AhlI ACTAGT 1 cut(s) 1565
AjiI CACGTC 1 cut(s) 465
AjnI CCWGG 3 cut(s) 1021, 1552, 1585
AluBI AGCT 9 cut(s) 13, 92, 250, 408, 1010, 1103, 1125, 1131, 1301
AluI AGCT 9 cut(s) 13, 92, 250, 408, 1010, 1103, 1125, 1131, 1301
Alw21I GWGCWC 1 cut(s) 1520
Alw26I GTCTC 6 cut(s) 520, 526, 553, 924, 1165, 1497
AlwI GGATC 2 cut(s) 594, 1469
Ama87I CYCGRG 1 cut(s) 317
Aor13HI TCCGGA 1 cut(s) 636
AoxI GGCC 5 cut(s) 208, 475, 1279, 1415, 1583
ApeKI GCWGC 4 cut(s) 92, 815, 1229, 1267
ApoI RAATTY 3 cut(s) 535, 1453, 1621
AseI ATTAAT 1 cut(s) 939
AspLEI GCGC 1 cut(s) 676
AspS9I GGNCC 4 cut(s) 577, 1064, 1315, 1550
AsuHPI GGTGA 1 cut(s) 757
AsuII TTCGAA 2 cut(s) 1051, 1093
AvaI CYCGRG 1 cut(s) 317
AvaII GGWCC 4 cut(s) 577, 1064, 1315, 1550
BalI TGGCCA 1 cut(s) 1585
BanI GGYRCC 1 cut(s) 711
Bbv12I GWGCWC 1 cut(s) 1520
BbvI GCAGC 4 cut(s) 79, 802, 1216, 1279
BccI CCATC 4 cut(s) 467, 767, 836, 1301
BciT130I CCWGG 3 cut(s) 1023, 1554, 1587
BciVI GTATCC 1 cut(s) 1133
BclI TGATCA 1 cut(s) 261
BcoDI GTCTC 6 cut(s) 520, 526, 553, 924, 1165, 1497
BcuI ACTAGT 1 cut(s) 1565
BfaI CTAG 3 cut(s) 405, 837, 1566
BfmI CTRYAG 5 cut(s) 93, 1120, 1126, 1180, 1230
BfuI GTATCC 1 cut(s) 1133
BisI GCNGC 5 cut(s) 93, 211, 816, 1230, 1268
BlsI GCNGC 5 cut(s) 94, 212, 817, 1231, 1269
BmcAI AGTACT 1 cut(s) 914
Bme1390I CCNGG 3 cut(s) 1023, 1554, 1587
Bme18I GGWCC 4 cut(s) 577, 1064, 1315, 1550
BmeT110I CYCGRG 1 cut(s) 317
BmgBI CACGTC 1 cut(s) 465
BmgT120I GGNCC 4 cut(s) 577, 1064, 1315, 1550
BmiI GGNNCC 6 cut(s) 286, 578, 579, 713, 1317, 1558
BmrFI CCNGG 3 cut(s) 1023, 1554, 1587
BmsI GCATC 4 cut(s) 403, 634, 793, 1603
BpmI CTGGAG 1 cut(s) 1575
Bpu10I CCTNAGC 1 cut(s) 1302
Bpu14I TTCGAA 2 cut(s) 1051, 1093
BsaI GGTCTC 1 cut(s) 520
BsaJI CCNNGG 4 cut(s) 1022, 1262, 1365, 1418
BsaWI WCCGGW 1 cut(s) 636
Bsc4I CCNNNNNNNGG 4 cut(s) 1073, 1277, 1670, 1685
Bse118I RCCGGY 1 cut(s) 869
Bse1I ACTGG 3 cut(s) 288, 613, 1690
BseAI TCCGGA 1 cut(s) 636
BseBI CCWGG 3 cut(s) 1023, 1554, 1587
BseDI CCNNGG 4 cut(s) 1022, 1262, 1365, 1418
BseGI GGATG 1 cut(s) 418
BseLI CCNNNNNNNGG 4 cut(s) 1073, 1277, 1670, 1685
BseMII CTCAG 4 cut(s) 451, 643, 1316, 1505
BseNI ACTGG 3 cut(s) 288, 613, 1690
BseXI GCAGC 4 cut(s) 79, 802, 1216, 1279
BseYI CCCAGC 1 cut(s) 1645
BsgI GTGCAG 2 cut(s) 699, 801
Bsh1236I CGCG 2 cut(s) 676, 1435
BshFI GGCC 5 cut(s) 210, 477, 1281, 1417, 1585
BshNI GGYRCC 1 cut(s) 711
BsiHKAI GWGCWC 1 cut(s) 1520
BsiHKCI CYCGRG 1 cut(s) 317
BsiSI CCGG 4 cut(s) 302, 637, 726, 870
BslFI GGGAC 3 cut(s) 316, 563, 1348
BslI CCNNNNNNNGG 4 cut(s) 1073, 1277, 1670, 1685
BsmAI GTCTC 6 cut(s) 520, 526, 553, 924, 1165, 1497
BsmBI CGTCTC 2 cut(s) 526, 924
BsmFI GGGAC 3 cut(s) 316, 563, 1348
BsnI GGCC 5 cut(s) 210, 477, 1281, 1417, 1585
Bso31I GGTCTC 1 cut(s) 520
BsoBI CYCGRG 1 cut(s) 317
Bsp119I TTCGAA 2 cut(s) 1051, 1093
Bsp1286I GDGCHC 1 cut(s) 1520
Bsp13I TCCGGA 1 cut(s) 636
Bsp1407I TGTACA 1 cut(s) 540
Bsp143I GATC 6 cut(s) 261, 505, 586, 924, 948, 1474
Bsp19I CCATGG 1 cut(s) 1418
BspACI CCGC 5 cut(s) 122, 211, 282, 978, 1435
BspANI GGCC 5 cut(s) 210, 477, 1281, 1417, 1585
BspCNI CTCAG 4 cut(s) 450, 642, 1315, 1506
BspEI TCCGGA 1 cut(s) 636
BspFNI CGCG 2 cut(s) 676, 1435
BspLI GGNNCC 6 cut(s) 286, 578, 579, 713, 1317, 1558
BspMAI CTGCAG 2 cut(s) 97, 1234
BspPI GGATC 2 cut(s) 594, 1469
BspT104I TTCGAA 2 cut(s) 1051, 1093
BspT107I GGYRCC 1 cut(s) 711
BspTNI GGTCTC 1 cut(s) 520
BsrFI RCCGGY 1 cut(s) 869
BsrGI TGTACA 1 cut(s) 540
BsrI ACTGG 3 cut(s) 288, 613, 1690
BssAI RCCGGY 1 cut(s) 869
BssECI CCNNGG 4 cut(s) 1022, 1262, 1365, 1418
BssMI GATC 6 cut(s) 261, 505, 586, 924, 948, 1474
BssT1I CCWWGG 1 cut(s) 1418
Bst2UI CCWGG 3 cut(s) 1023, 1554, 1587
Bst4CI ACNGT 9 cut(s) 379, 545, 935, 1207, 1250, 1396, 1441, 1541, 1630
Bst6I CTCTTC 1 cut(s) 876
BstAPI GCANNNNNTGC 1 cut(s) 1613
BstAUI TGTACA 1 cut(s) 540
BstBI TTCGAA 2 cut(s) 1051, 1093
BstC8I GCNNGC 4 cut(s) 678, 871, 1080, 1491
BstDEI CTNAG 5 cut(s) 9, 437, 629, 1302, 1514
BstDSI CCRYGG 1 cut(s) 1418
BstEII GGTNACC 1 cut(s) 1589
BstENI CCTNNNNNAGG 1 cut(s) 1668
BstF5I GGATG 1 cut(s) 418
BstFNI CGCG 2 cut(s) 676, 1435
BstHHI GCGC 1 cut(s) 676
BstKTI GATC 6 cut(s) 264, 508, 589, 927, 951, 1477
BstMAI GTCTC 6 cut(s) 520, 526, 553, 924, 1165, 1497
BstMBI GATC 6 cut(s) 261, 505, 586, 924, 948, 1474
BstMWI GCNNNNNNNGC 6 cut(s) 812, 975, 1007, 1016, 1376, 1613
BstNI CCWGG 3 cut(s) 1023, 1554, 1587
BstPI GGTNACC 1 cut(s) 1589
BstSCI CCNGG 3 cut(s) 1021, 1552, 1585
BstSFI CTRYAG 5 cut(s) 93, 1120, 1126, 1180, 1230
BstUI CGCG 2 cut(s) 676, 1435
BstV1I GCAGC 4 cut(s) 79, 802, 1216, 1279
BsuI GTATCC 1 cut(s) 1133
BsuRI GGCC 5 cut(s) 210, 477, 1281, 1417, 1585
BtgI CCRYGG 1 cut(s) 1418
BtrI CACGTC 1 cut(s) 465
BtsCI GGATG 1 cut(s) 418
BtsI GCAGTG 2 cut(s) 864, 1056
BtsIMutI CAGTG 9 cut(s) 445, 550, 653, 864, 1056, 1392, 1511, 1635, 1683
Cac8I GCNNGC 4 cut(s) 678, 871, 1080, 1491
CfoI GCGC 1 cut(s) 676
Cfr10I RCCGGY 1 cut(s) 869
Cfr13I GGNCC 4 cut(s) 577, 1064, 1315, 1550
Csp6I GTAC 4 cut(s) 531, 541, 913, 1537
CviAII CATG 6 cut(s) 1072, 1419, 1459, 1494, 1581, 1595
CviQI GTAC 4 cut(s) 531, 541, 913, 1537
DdeI CTNAG 5 cut(s) 9, 437, 629, 1302, 1514
DpnI GATC 6 cut(s) 263, 507, 588, 926, 950, 1476
DpnII GATC 6 cut(s) 261, 505, 586, 924, 948, 1474
EaeI YGGCCR 2 cut(s) 208, 1583
Eam1104I CTCTTC 1 cut(s) 876
EarI CTCTTC 1 cut(s) 876
EciI GGCGGA 1 cut(s) 111
Eco130I CCWWGG 1 cut(s) 1418
Eco31I GGTCTC 1 cut(s) 520
Eco47I GGWCC 4 cut(s) 577, 1064, 1315, 1550
Eco88I CYCGRG 1 cut(s) 317
Eco91I GGTNACC 1 cut(s) 1589
EcoNI CCTNNNNNAGG 1 cut(s) 1668
EcoO109I RGGNCCY 2 cut(s) 577, 1550
EcoO65I GGTNACC 1 cut(s) 1589
EcoRII CCWGG 3 cut(s) 1021, 1552, 1585
EcoT14I CCWWGG 1 cut(s) 1418
ErhI CCWWGG 1 cut(s) 1418
Esp3I CGTCTC 2 cut(s) 526, 924
FaeI CATG 6 cut(s) 1075, 1422, 1462, 1497, 1584, 1598
FalI AAGNNNNNCTT 2 cut(s) 899, 931
FaqI GGGAC 3 cut(s) 316, 563, 1348
FatI CATG 6 cut(s) 1071, 1418, 1458, 1493, 1580, 1594
FauNDI CATATG 1 cut(s) 134
FbaI TGATCA 1 cut(s) 261
Fnu4HI GCNGC 5 cut(s) 93, 211, 816, 1230, 1268
FokI GGATG 1 cut(s) 425
Fsp4HI GCNGC 5 cut(s) 93, 211, 816, 1230, 1268
FspBI CTAG 3 cut(s) 405, 837, 1566
GlaI GCGC 1 cut(s) 675
GluI GCNGC 5 cut(s) 93, 211, 816, 1230, 1268
GsaI CCCAGC 1 cut(s) 1649
GsuI CTGGAG 1 cut(s) 1575
HaeIII GGCC 5 cut(s) 210, 477, 1281, 1417, 1585
HapII CCGG 4 cut(s) 302, 637, 726, 870
HhaI GCGC 1 cut(s) 676
Hin1II CATG 6 cut(s) 1075, 1422, 1462, 1497, 1584, 1598
Hin6I GCGC 1 cut(s) 674
HinP1I GCGC 1 cut(s) 674
HincII GTYRAC 2 cut(s) 382, 1039
HindII GTYRAC 2 cut(s) 382, 1039
HindIII AAGCTT 2 cut(s) 11, 248
HinfI GANTC 3 cut(s) 689, 1288, 1321
HpaI GTTAAC 1 cut(s) 382
HpaII CCGG 4 cut(s) 302, 637, 726, 870
HphI GGTGA 1 cut(s) 757
Hpy166II GTNNAC 5 cut(s) 144, 382, 685, 1039, 1444
Hpy188I TCNGA 5 cut(s) 412, 472, 929, 945, 1326
Hpy188III TCNNGA 5 cut(s) 29, 254, 637, 1345, 1399
Hpy8I GTNNAC 5 cut(s) 144, 382, 685, 1039, 1444
HpyAV CCTTC 8 cut(s) 165, 488, 634, 702, 725, 742, 1000, 1417
HpyCH4III ACNGT 9 cut(s) 379, 545, 935, 1207, 1250, 1396, 1441, 1541, 1630
HpyCH4IV ACGT 1 cut(s) 464
HpyF10VI GCNNNNNNNGC 6 cut(s) 812, 975, 1007, 1016, 1376, 1613
HpyF3I CTNAG 5 cut(s) 9, 437, 629, 1302, 1514
HpySE526I ACGT 1 cut(s) 464
Hsp92II CATG 6 cut(s) 1075, 1422, 1462, 1497, 1584, 1598
HspAI GCGC 1 cut(s) 674
KflI GGGWCCC 1 cut(s) 577
Kpn2I TCCGGA 1 cut(s) 636
KroI GCCGGC 1 cut(s) 869
KroNI GCCGGC 1 cut(s) 871
Ksp22I TGATCA 1 cut(s) 261
KspAI GTTAAC 1 cut(s) 382
Kzo9I GATC 6 cut(s) 261, 505, 586, 924, 948, 1474
LmnI GCTCC 2 cut(s) 1100, 1556
Lsp1109I GCAGC 4 cut(s) 79, 802, 1216, 1279
LweI GCATC 4 cut(s) 403, 634, 793, 1603
MaeI CTAG 3 cut(s) 405, 837, 1566
MaeII ACGT 1 cut(s) 464
MalI GATC 6 cut(s) 263, 507, 588, 926, 950, 1476
MboI GATC 6 cut(s) 261, 505, 586, 924, 948, 1474
MboII GAAGA 6 cut(s) 266, 392, 710, 717, 746, 893
MhlI GDGCHC 1 cut(s) 1520
MlsI TGGCCA 1 cut(s) 1585
MluCI AATT 7 cut(s) 535, 894, 1175, 1348, 1453, 1621, 1695
MluNI TGGCCA 1 cut(s) 1585
MlyI GAGTC 2 cut(s) 683, 1282
MmeI TCCRAC 2 cut(s) 247, 952
Mox20I TGGCCA 1 cut(s) 1585
MroI TCCGGA 1 cut(s) 636
MroNI GCCGGC 1 cut(s) 869
MscI TGGCCA 1 cut(s) 1585
MseI TTAA 5 cut(s) 344, 381, 449, 939, 1694
MslI CAYNNNNRTG 1 cut(s) 186
Msp20I TGGCCA 1 cut(s) 1585
MspA1I CMGCKG 1 cut(s) 1125
MspI CCGG 4 cut(s) 302, 637, 726, 870
MspR9I CCNGG 3 cut(s) 1023, 1554, 1587
MvaI CCWGG 3 cut(s) 1023, 1554, 1587
MvnI CGCG 2 cut(s) 676, 1435
MwoI GCNNNNNNNGC 6 cut(s) 812, 975, 1007, 1016, 1376, 1613
NaeI GCCGGC 1 cut(s) 871
NcoI CCATGG 1 cut(s) 1418
NdeI CATATG 1 cut(s) 134
NdeII GATC 6 cut(s) 261, 505, 586, 924, 948, 1474
NgoMIV GCCGGC 1 cut(s) 869
NlaIII CATG 6 cut(s) 1075, 1422, 1462, 1497, 1584, 1598
NlaIV GGNNCC 6 cut(s) 286, 578, 579, 713, 1317, 1558
NmeAIII GCCGAG 4 cut(s) 87, 1243, 1346, 1558
NmuCI GTSAC 3 cut(s) 651, 862, 1190
NspV TTCGAA 2 cut(s) 1051, 1093
PaeR7I CTCGAG 1 cut(s) 317
PdiI GCCGGC 1 cut(s) 871
PfeI GAWTC 1 cut(s) 1321
PkrI GCNGC 5 cut(s) 94, 212, 817, 1231, 1269
PleI GAGTC 2 cut(s) 683, 1282
PpsI GAGTC 2 cut(s) 683, 1282
PpuMI RGGWCCY 2 cut(s) 577, 1550
PshBI ATTAAT 1 cut(s) 939
PsiI TTATAA 1 cut(s) 698
Psp5II RGGWCCY 2 cut(s) 577, 1550
Psp6I CCWGG 3 cut(s) 1021, 1552, 1585
PspEI GGTNACC 1 cut(s) 1589
PspFI CCCAGC 1 cut(s) 1645
PspGI CCWGG 3 cut(s) 1021, 1552, 1585
PspN4I GGNNCC 6 cut(s) 286, 578, 579, 713, 1317, 1558
PspPI GGNCC 4 cut(s) 577, 1064, 1315, 1550
PspPPI RGGWCCY 2 cut(s) 577, 1550
PspXI VCTCGAGB 1 cut(s) 317
PstI CTGCAG 2 cut(s) 97, 1234
PvuII CAGCTG 1 cut(s) 1125
RsaI GTAC 4 cut(s) 532, 542, 914, 1538
RsaNI GTAC 4 cut(s) 531, 541, 913, 1537
RseI CAYNNNNRTG 1 cut(s) 186
SaqAI TTAA 5 cut(s) 344, 381, 449, 939, 1694
SatI GCNGC 5 cut(s) 93, 211, 816, 1230, 1268
Sau3AI GATC 6 cut(s) 261, 505, 586, 924, 948, 1474
Sau96I GGNCC 4 cut(s) 577, 1064, 1315, 1550
ScaI AGTACT 1 cut(s) 914
SchI GAGTC 2 cut(s) 683, 1282
ScrFI CCNGG 3 cut(s) 1023, 1554, 1587
SduI GDGCHC 1 cut(s) 1520
SfaNI GCATC 4 cut(s) 403, 634, 793, 1603
SfcI CTRYAG 5 cut(s) 93, 1120, 1126, 1180, 1230
Sfr274I CTCGAG 1 cut(s) 317
SfuI TTCGAA 2 cut(s) 1051, 1093
SinI GGWCC 4 cut(s) 577, 1064, 1315, 1550
SlaI CTCGAG 1 cut(s) 317
SmiMI CAYNNNNRTG 1 cut(s) 186
SmlI CTYRAG 1 cut(s) 317
SmoI CTYRAG 1 cut(s) 317
SpeI ACTAGT 1 cut(s) 1565
Sse9I AATT 7 cut(s) 535, 894, 1175, 1348, 1453, 1621, 1695
SsiI CCGC 5 cut(s) 122, 211, 282, 978, 1435
SspMI CTAG 3 cut(s) 405, 837, 1566
StyD4I CCNGG 3 cut(s) 1021, 1552, 1585
StyI CCWWGG 1 cut(s) 1418
TaaI ACNGT 9 cut(s) 379, 545, 935, 1207, 1250, 1396, 1441, 1541, 1630
TaiI ACGT 1 cut(s) 467
TaqI TCGA 9 cut(s) 318, 372, 617, 703, 902, 1051, 1093, 1286, 1309
TasI AATT 7 cut(s) 535, 894, 1175, 1348, 1453, 1621, 1695
TatI WGTACW 2 cut(s) 540, 912
TauI GCSGC 1 cut(s) 213
TfiI GAWTC 1 cut(s) 1321
Tru1I TTAA 5 cut(s) 344, 381, 449, 939, 1694
Tru9I TTAA 5 cut(s) 344, 381, 449, 939, 1694
TscAI CASTG 9 cut(s) 445, 550, 660, 871, 1063, 1399, 1518, 1635, 1690
TseFI GTSAC 3 cut(s) 651, 862, 1190
TseI GCWGC 4 cut(s) 92, 815, 1229, 1267
Tsp45I GTSAC 3 cut(s) 651, 862, 1190
TspDTI ATGAA 6 cut(s) 7, 27, 747, 894, 1204, 1447
TspGWI ACGGA 5 cut(s) 160, 508, 682, 1215, 1328
TspRI CASTG 9 cut(s) 445, 550, 660, 871, 1063, 1399, 1518, 1635, 1690
VpaK11BI GGWCC 4 cut(s) 577, 1064, 1315, 1550
VspI ATTAAT 1 cut(s) 939
XagI CCTNNNNNAGG 1 cut(s) 1668
XapI RAATTY 3 cut(s) 535, 1453, 1621
XcmI CCANNNNNNNNNTGG 2 cut(s) 776, 1009
XhoI CTCGAG 1 cut(s) 317
XspI CTAG 3 cut(s) 405, 837, 1566
ZrmI AGTACT 1 cut(s) 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.