RLG00000001039

pectinesterase pectinesterase inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000522
Physical Location & Seq
Forward (+)
9605781 .. 9607592
1812 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001039

Sequence Viewer

Length: 1614 bp
ATGTTCCTCTCAGCATTTCTGTTCCGCCCGAAACCATATGCAAGTCCACTCCACACCCTTCTGCAGTTTGCATTTCCGTCCTCCCTTACAAAAAATGCCACTGTCTATGACTTCGGCCGCTTTTCAGTCCAACACTCATTCACCCAATCCCAAAAGCTTCTGGATTTGATCAACAAATATCTTCAAGGTGGTTCCAGTTTATCAAAGCTGGAAATCCAAGCTCTTGAGGATTGCAAGTCGCTTGCATTGTTCAACATTGATTTCTTATCAAACACTCTTGAAACTGTTAGGAAAACAAGCGGTGTTCTTCCTAGCTCCGATGCTGACGATGTCCAAACCCTGCTCAGTGCCATCTTAACCAACCAGGAGACGTGTTCTGATGGCCTTCAATCTGTGAGTTCAGTCCAAAATGATCTCTCAGTCTCCGTTTCTAATGGTACAAATTTGCACAGTGTCTCATTAGCGTTGGTTACAAAGGGTTGGGTCCCAAAGGATCACAAAAGTAATGGAACACCAAACCAGTCGAAAAAGCATCTCAGTTTCCGAAAGGGGCGCTTGTCACTGAAAATGTCAAGCGAAGCACGTGCAGTTTACGACTCGGTTATAAATCAAAGAAGGCACCTTCTTCAGGCCGGGGATGAAGAAATTTTGGTGAAGGACATTGTGGTTGTGAGCCAAGATGGAAGTGGAAACTTCACTACCATAAATGATGCTATCACTGCTGCACCCAATAACTCTGTTGCTAGTGATGGCTACTTCTTGGTATATGTCACTGCCGGCGTTTATGAAGAGTACGTATCAATTATATCGAAAAAGAAGTACTTGTTGCTGATCGGAGATGGTATTAATCAGACGATCATCACAGGAAACAACAGCGTTGGAGGCGGTTCAACCACCTTCAACTCTGCCACTTTAGGGGTGACTTTGATGATATGCATATACGCTGTGGTAGCACCAGGGTTTATAGCAGTCTACATAACTGTTCGAAACACTGCTGGACCAAGCATGGGGCAAGCAGTTGCAGTTCGAAATGGAGCTGACTTGTCAGTTTTCTACATCTGTAGCTTTGAGGGATACCAAGACACCTTTTGTTTCCAAAACTGCAACATATATCCTCGCCAGCCCCGCAAAGGCCAATCGAATCCCATCACAGCTCAGGGTCGAACGGACCCCAATCAGAACACAGGGACTTCAATCCAGAATTGCACCATTACAGCTGCGGCTGATTTGGCTTCAAGTAACTTCACTGTCAAGACATATCTTGGGAGGCCATGGAAGGAGTATTCGAGGACGGCTTGCTTGCAGAATTTCATGGATAGTTTGATCGATCCTGCTGGTTGGCTCGAGTGGAGTGGAGATTTTGCACTGAGCACATTGTATTATGCTGAGTACAATAATAGAGGACCTGGATCAATCACTTGCAACAGAGTTAAATGGCCTGGCTACCATGTGATCGGTGCAACTGATGCTGCCAACTTTACAGTCTCCAACTTCATATTGGGGGATAATTGGCTGCCTCAGACAGGAGTGCCTTACACTGGTGGCTTAATTTGGGAAACTTGGTTCAAGTTTTTCTCCGTGTTTTTTTTTTCATGTGTGTGTGAAGATTGTTAG

Protein Analysis

538

Amino Acids

58.72

Weight (kDa)

6.39

Isoelectric Point (pI)

33.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 29 - 156 7.2e-19 Plant invertase/pectin methylesterase inhibitor
Pectinesterase PF01095 222 - 363 3.8e-40 Pectinesterase
Pectinesterase PF01095 364 - 502 1.7e-59 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000522)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02810 AT2G47550 AT4G02330
fragaria_vesca FvH4_2g25960 FvH4_2g25960 FvH4_2g25970 FvH4_5g35570 FvH4_5g35580 FvH4_5g35590
malus_domestica MD03G1290900.v1.1 MD03G1291000.v1.1 MD08G1195600.v1.1 MD11G1307400.v1.1 MD11G1307500.v1.1
prunus_persica Prupe.1G529400_v2.0.a1 Prupe.1G529500_v2.0.a1 Prupe.8G263900_v2.0.a1 Prupe.8G264000_v2.0.a1
pyrus_communis pycom08g16800
rosa_chinensis RchiOBHm_Chr6g0294321 RchiOBHm_Chr6g0294331 RchiOBHm_Chr7g0236951 RchiOBHm_Chr7g0236971 RchiOBHm_Chr7g0237041 RchiOBHm_Chr7g0237051
rosa_laevigata RLG00000001034 RLG00000001035 RLG00000001039 RLG00000001043 RLG00000001045 RLG00000011880 RLG00000011881 RLG00000034181
rosa_multiflora Rmu_co8086188.1_g000001 Rmu_co8458485.1_g000001 Rmu_sc0000272.1_g000007 Rmu_sc0000272.1_g000009 Rmu_sc0002131.1_g000030 Rmu_sc0002131.1_g000037 Rmu_sc0005369.1_g000005 Rmu_sc0005369.1_g000008 Rmu_sc0007991.1_g000005 Rmu_sc0007991.1_g000013 Rmu_sc0033563.1_g000001
rosa_roxburghii Rroxscaffold_3G00224540 Rroxscaffold_3G00224600 Rroxscaffold_3G00224650 Rroxscaffold_3G00224660 Rroxscaffold_7G00173470 Rroxscaffold_7G00173480
rosa_rugosa Rorug06G0243400 Rorug06G0243500 Rorug07G0301200 Rorug07G0301500 Rorug07G0301600
rosa_samantha Rh6AG356000 Rh6AG356100 Rh6BG362600 Rh6BG362800 Rh6CG370000 Rh6CG370100 Rh6DG356500 Rh6DG356600 Rh7AG456200 Rh7AG456500 Rh7AG457500 Rh7AG457600 Rh7BG427500 Rh7BG427700 Rh7BG428400 Rh7BG428500 Rh7CG475100 Rh7CG475300 Rh7CG475700 Rh7CG475800 Rh7DG444100 Rh7DG444300 Rh7DG444700 Rh7DG444900
rosa_wichuraiana Rw6G031020 Rw6G031030 Rw7G037870 Rw7G037880 Rw7G037920 Rw7G037940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 605
AccB1I GGYRCC 1 cut(s) 618
AccI GTMKAC 1 cut(s) 972
AciI CCGC 6 cut(s) 25, 118, 300, 885, 1126, 1220
AclWI GGATC 3 cut(s) 501, 1322, 1417
AcoI YGGCCR 1 cut(s) 115
AcsI RAATTY 3 cut(s) 442, 645, 1306
AcuI CTGAAG 1 cut(s) 611
AcvI CACGTG 1 cut(s) 584
AfaI GTAC 4 cut(s) 439, 794, 821, 1391
AfiI CCNNNNNNNGG 6 cut(s) 628, 915, 1007, 1130, 1523, 1538
AflIII ACRYGT 1 cut(s) 371
AgsI TTSAA 9 cut(s) 185, 253, 281, 389, 891, 901, 1194, 1236, 1567
AjiI CACGTC 1 cut(s) 372
AjnI CCWGG 4 cut(s) 363, 955, 1405, 1438
AloI GAACNNNNNNTCC 2 cut(s) 1547, 1579
AluBI AGCT 8 cut(s) 157, 208, 221, 315, 1037, 1065, 1154, 1217
AluI AGCT 8 cut(s) 157, 208, 221, 315, 1037, 1065, 1154, 1217
Alw21I GWGCWC 1 cut(s) 1373
Alw26I GTCTC 4 cut(s) 362, 427, 460, 1489
AlwI GGATC 3 cut(s) 501, 1322, 1417
Ama87I CYCGRG 1 cut(s) 1343
AoxI GGCC 6 cut(s) 115, 382, 630, 1132, 1268, 1436
ApeKI GCWGC 4 cut(s) 722, 1217, 1469, 1513
ApoI RAATTY 3 cut(s) 442, 645, 1306
AseI ATTAAT 1 cut(s) 846
AspLEI GCGC 1 cut(s) 555
AspS9I GGNCC 4 cut(s) 484, 998, 1168, 1403
AsuC2I CCSGG 1 cut(s) 634
AsuHPI GGTGA 3 cut(s) 133, 664, 931
AsuII TTCGAA 2 cut(s) 985, 1027
AvaI CYCGRG 1 cut(s) 1343
AvaII GGWCC 4 cut(s) 484, 998, 1168, 1403
BanI GGYRCC 1 cut(s) 618
BbrPI CACGTG 1 cut(s) 584
Bbv12I GWGCWC 1 cut(s) 1373
BbvI GCAGC 4 cut(s) 709, 1204, 1456, 1500
BccI CCATC 6 cut(s) 359, 374, 674, 743, 833, 1154
BceAI ACGGC 1 cut(s) 1308
BcgI CGANNNNNNTGC 2 cut(s) 566, 600
BciT130I CCWGG 4 cut(s) 365, 957, 1407, 1440
BciVI GTATCC 1 cut(s) 1067
BclI TGATCA 1 cut(s) 168
BcnI CCSGG 1 cut(s) 634
BcoDI GTCTC 4 cut(s) 362, 427, 460, 1489
BfaI CTAG 2 cut(s) 312, 744
BfmI CTRYAG 2 cut(s) 62, 1060
BfoI RGCGCY 1 cut(s) 556
BfuI GTATCC 1 cut(s) 1067
BisI GCNGC 6 cut(s) 118, 723, 1218, 1221, 1470, 1514
BlsI GCNGC 6 cut(s) 119, 724, 1219, 1222, 1471, 1515
BmcAI AGTACT 1 cut(s) 821
Bme1390I CCNGG 5 cut(s) 365, 634, 957, 1407, 1440
Bme18I GGWCC 4 cut(s) 484, 998, 1168, 1403
BmeT110I CYCGRG 1 cut(s) 1343
BmgBI CACGTC 1 cut(s) 372
BmgT120I GGNCC 4 cut(s) 484, 998, 1168, 1403
BmiI GGNNCC 5 cut(s) 193, 485, 486, 620, 1170
BmrFI CCNGG 5 cut(s) 365, 634, 957, 1407, 1440
BmsI GCATC 4 cut(s) 310, 541, 700, 1456
Bpu10I CCTNAGC 1 cut(s) 1155
Bpu14I TTCGAA 2 cut(s) 985, 1027
BpuEI CTTGAG 1 cut(s) 245
BpuMI CCSGG 1 cut(s) 634
Bsa29I ATCGAT 1 cut(s) 1326
BsaAI YACGTR 2 cut(s) 584, 796
BsaJI CCNNGG 3 cut(s) 633, 956, 1271
Bsc4I CCNNNNNNNGG 6 cut(s) 628, 915, 1007, 1130, 1523, 1538
Bse118I RCCGGY 1 cut(s) 776
Bse1I ACTGG 3 cut(s) 195, 520, 1543
BseBI CCWGG 4 cut(s) 365, 957, 1407, 1440
BseCI ATCGAT 1 cut(s) 1326
BseDI CCNNGG 3 cut(s) 633, 956, 1271
BseGI GGATG 1 cut(s) 643
BseLI CCNNNNNNNGG 6 cut(s) 628, 915, 1007, 1130, 1523, 1538
BseMII CTCAG 8 cut(s) 24, 358, 432, 550, 1169, 1358, 1377, 1532
BseNI ACTGG 3 cut(s) 195, 520, 1543
BseX3I CGGCCG 1 cut(s) 115
BseXI GCAGC 4 cut(s) 709, 1204, 1456, 1500
BsgI GTGCAG 2 cut(s) 606, 708
Bsh1285I CGRYCG 1 cut(s) 118
BshFI GGCC 6 cut(s) 117, 384, 632, 1134, 1270, 1438
BshNI GGYRCC 1 cut(s) 618
BshVI ATCGAT 1 cut(s) 1326
BsiEI CGRYCG 1 cut(s) 118
BsiHKAI GWGCWC 1 cut(s) 1373
BsiHKCI CYCGRG 1 cut(s) 1343
BsiSI CCGG 2 cut(s) 633, 777
BslFI GGGAC 2 cut(s) 470, 1201
BslI CCNNNNNNNGG 6 cut(s) 628, 915, 1007, 1130, 1523, 1538
BsmAI GTCTC 4 cut(s) 362, 427, 460, 1489
BsmBI CGTCTC 1 cut(s) 362
BsmFI GGGAC 2 cut(s) 470, 1201
BsnI GGCC 6 cut(s) 117, 384, 632, 1134, 1270, 1438
BsoBI CYCGRG 1 cut(s) 1343
Bsp119I TTCGAA 2 cut(s) 985, 1027
Bsp1286I GDGCHC 1 cut(s) 1373
Bsp143I GATC 9 cut(s) 168, 412, 493, 831, 855, 1323, 1327, 1409, 1452
Bsp19I CCATGG 1 cut(s) 1271
BspACI CCGC 6 cut(s) 25, 118, 300, 885, 1126, 1220
BspANI GGCC 6 cut(s) 117, 384, 632, 1134, 1270, 1438
BspCNI CTCAG 8 cut(s) 23, 357, 431, 549, 1168, 1359, 1378, 1531
BspDI ATCGAT 1 cut(s) 1326
BspLI GGNNCC 5 cut(s) 193, 485, 486, 620, 1170
BspMAI CTGCAG 1 cut(s) 66
BspPI GGATC 3 cut(s) 501, 1322, 1417
BspT104I TTCGAA 2 cut(s) 985, 1027
BspT107I GGYRCC 1 cut(s) 618
BsrFI RCCGGY 1 cut(s) 776
BsrI ACTGG 3 cut(s) 195, 520, 1543
BssAI RCCGGY 1 cut(s) 776
BssECI CCNNGG 3 cut(s) 633, 956, 1271
BssMI GATC 9 cut(s) 168, 412, 493, 831, 855, 1323, 1327, 1409, 1452
BssT1I CCWWGG 1 cut(s) 1271
Bst2UI CCWGG 4 cut(s) 365, 957, 1407, 1440
Bst4CI ACNGT 6 cut(s) 103, 286, 452, 982, 1249, 1483
Bst6I CTCTTC 1 cut(s) 783
BstAPI GCANNNNNTGC 1 cut(s) 1466
BstBAI YACGTR 2 cut(s) 584, 796
BstBI TTCGAA 2 cut(s) 985, 1027
BstC8I GCNNGC 6 cut(s) 243, 778, 1014, 1121, 1297, 1301
BstDEI CTNAG 8 cut(s) 10, 344, 418, 536, 1155, 1367, 1386, 1518
BstDSI CCRYGG 1 cut(s) 1271
BstENI CCTNNNNNAGG 2 cut(s) 626, 1521
BstF5I GGATG 1 cut(s) 643
BstH2I RGCGCY 1 cut(s) 556
BstHHI GCGC 1 cut(s) 555
BstKTI GATC 9 cut(s) 171, 415, 496, 834, 858, 1326, 1330, 1412, 1455
BstMAI GTCTC 4 cut(s) 362, 427, 460, 1489
BstMBI GATC 9 cut(s) 168, 412, 493, 831, 855, 1323, 1327, 1409, 1452
BstMCI CGRYCG 1 cut(s) 118
BstMWI GCNNNNNNNGC 6 cut(s) 719, 882, 950, 1125, 1229, 1466
BstNI CCWGG 4 cut(s) 365, 957, 1407, 1440
BstSCI CCNGG 5 cut(s) 363, 632, 955, 1405, 1438
BstSFI CTRYAG 2 cut(s) 62, 1060
BstSNI TACGTA 1 cut(s) 796
BstV1I GCAGC 4 cut(s) 709, 1204, 1456, 1500
BstZI CGGCCG 1 cut(s) 115
Bsu15I ATCGAT 1 cut(s) 1326
BsuI GTATCC 1 cut(s) 1067
BsuRI GGCC 6 cut(s) 117, 384, 632, 1134, 1270, 1438
BsuTUI ATCGAT 1 cut(s) 1326
BtgI CCRYGG 1 cut(s) 1271
BtrI CACGTC 1 cut(s) 372
BtsCI GGATG 1 cut(s) 643
BtsI GCAGTG 3 cut(s) 717, 771, 990
Cac8I GCNNGC 6 cut(s) 243, 778, 1014, 1121, 1297, 1301
CfoI GCGC 1 cut(s) 555
Cfr10I RCCGGY 1 cut(s) 776
Cfr13I GGNCC 4 cut(s) 484, 998, 1168, 1403
ClaI ATCGAT 1 cut(s) 1326
Csp6I GTAC 4 cut(s) 438, 793, 820, 1390
CviAII CATG 5 cut(s) 1006, 1272, 1312, 1448, 1593
CviQI GTAC 4 cut(s) 438, 793, 820, 1390
DdeI CTNAG 8 cut(s) 10, 344, 418, 536, 1155, 1367, 1386, 1518
DpnI GATC 9 cut(s) 170, 414, 495, 833, 857, 1325, 1329, 1411, 1454
DpnII GATC 9 cut(s) 168, 412, 493, 831, 855, 1323, 1327, 1409, 1452
EaeI YGGCCR 1 cut(s) 115
EagI CGGCCG 1 cut(s) 115
Eam1104I CTCTTC 1 cut(s) 783
EarI CTCTTC 1 cut(s) 783
EciI GGCGGA 1 cut(s) 14
EclXI CGGCCG 1 cut(s) 115
Eco105I TACGTA 1 cut(s) 796
Eco130I CCWWGG 1 cut(s) 1271
Eco47I GGWCC 4 cut(s) 484, 998, 1168, 1403
Eco52I CGGCCG 1 cut(s) 115
Eco57I CTGAAG 1 cut(s) 611
Eco72I CACGTG 1 cut(s) 584
Eco88I CYCGRG 1 cut(s) 1343
EcoNI CCTNNNNNAGG 2 cut(s) 626, 1521
EcoO109I RGGNCCY 2 cut(s) 484, 1403
EcoRII CCWGG 4 cut(s) 363, 955, 1405, 1438
EcoT14I CCWWGG 1 cut(s) 1271
EcoT22I ATGCAT 1 cut(s) 938
ErhI CCWWGG 1 cut(s) 1271
Esp3I CGTCTC 1 cut(s) 362
FaeI CATG 5 cut(s) 1009, 1275, 1315, 1451, 1596
FalI AAGNNNNNCTT 4 cut(s) 539, 571, 806, 838
FaqI GGGAC 2 cut(s) 470, 1201
FatI CATG 5 cut(s) 1005, 1271, 1311, 1447, 1592
FauI CCCGC 1 cut(s) 1133
FauNDI CATATG 1 cut(s) 37
FbaI TGATCA 1 cut(s) 168
FblI GTMKAC 1 cut(s) 972
Fnu4HI GCNGC 6 cut(s) 118, 723, 1218, 1221, 1470, 1514
FokI GGATG 1 cut(s) 650
Fsp4HI GCNGC 6 cut(s) 118, 723, 1218, 1221, 1470, 1514
FspBI CTAG 2 cut(s) 312, 744
GlaI GCGC 1 cut(s) 554
GluI GCNGC 6 cut(s) 118, 723, 1218, 1221, 1470, 1514
HaeII RGCGCY 1 cut(s) 556
HaeIII GGCC 6 cut(s) 117, 384, 632, 1134, 1270, 1438
HapII CCGG 2 cut(s) 633, 777
HhaI GCGC 1 cut(s) 555
Hin1II CATG 5 cut(s) 1009, 1275, 1315, 1451, 1596
Hin6I GCGC 1 cut(s) 553
HinP1I GCGC 1 cut(s) 553
HindIII AAGCTT 1 cut(s) 155
HinfI GANTC 2 cut(s) 596, 1141
HpaII CCGG 2 cut(s) 633, 777
HphI GGTGA 3 cut(s) 133, 664, 931
Hpy166II GTNNAC 3 cut(s) 47, 592, 973
Hpy188I TCNGA 7 cut(s) 319, 379, 545, 836, 852, 1179, 1521
Hpy188III TCNNGA 5 cut(s) 161, 224, 278, 1198, 1252
Hpy8I GTNNAC 3 cut(s) 47, 592, 973
HpyAV CCTTC 7 cut(s) 68, 395, 609, 632, 649, 907, 1270
HpyCH4III ACNGT 6 cut(s) 103, 286, 452, 982, 1249, 1483
HpyCH4IV ACGT 3 cut(s) 371, 583, 795
HpyF10VI GCNNNNNNNGC 6 cut(s) 719, 882, 950, 1125, 1229, 1466
HpyF3I CTNAG 8 cut(s) 10, 344, 418, 536, 1155, 1367, 1386, 1518
HpySE526I ACGT 3 cut(s) 371, 583, 795
Hsp92II CATG 5 cut(s) 1009, 1275, 1315, 1451, 1596
HspAI GCGC 1 cut(s) 553
KflI GGGWCCC 1 cut(s) 484
KroI GCCGGC 1 cut(s) 776
KroNI GCCGGC 1 cut(s) 778
Ksp22I TGATCA 1 cut(s) 168
Kzo9I GATC 9 cut(s) 168, 412, 493, 831, 855, 1323, 1327, 1409, 1452
LmnI GCTCC 2 cut(s) 320, 1034
Lsp1109I GCAGC 4 cut(s) 709, 1204, 1456, 1500
LweI GCATC 4 cut(s) 310, 541, 700, 1456
MaeI CTAG 2 cut(s) 312, 744
MaeII ACGT 3 cut(s) 371, 583, 795
MaeIII GTNAC 5 cut(s) 469, 558, 769, 919, 1238
MalI GATC 9 cut(s) 170, 414, 495, 833, 857, 1325, 1329, 1411, 1454
MboI GATC 9 cut(s) 168, 412, 493, 831, 855, 1323, 1327, 1409, 1452
MboII GAAGA 5 cut(s) 173, 299, 617, 653, 800
MhlI GDGCHC 1 cut(s) 1373
MluCI AATT 7 cut(s) 442, 645, 801, 1201, 1306, 1507, 1548
MlyI GAGTC 1 cut(s) 590
MmeI TCCRAC 3 cut(s) 154, 859, 1512
Mph1103I ATGCAT 1 cut(s) 938
MroNI GCCGGC 1 cut(s) 776
MseI TTAA 4 cut(s) 356, 846, 1431, 1547
MslI CAYNNNNRTG 1 cut(s) 1597
MspA1I CMGCKG 1 cut(s) 1217
MspI CCGG 2 cut(s) 633, 777
MspR9I CCNGG 5 cut(s) 365, 634, 957, 1407, 1440
MvaI CCWGG 4 cut(s) 365, 957, 1407, 1440
MwoI GCNNNNNNNGC 6 cut(s) 719, 882, 950, 1125, 1229, 1466
NaeI GCCGGC 1 cut(s) 778
NciI CCSGG 1 cut(s) 634
NcoI CCATGG 1 cut(s) 1271
NdeI CATATG 1 cut(s) 37
NdeII GATC 9 cut(s) 168, 412, 493, 831, 855, 1323, 1327, 1409, 1452
NgoMIV GCCGGC 1 cut(s) 776
NlaIII CATG 5 cut(s) 1009, 1275, 1315, 1451, 1596
NlaIV GGNNCC 5 cut(s) 193, 485, 486, 620, 1170
NmuCI GTSAC 3 cut(s) 558, 769, 919
NsiI ATGCAT 1 cut(s) 938
NspV TTCGAA 2 cut(s) 985, 1027
PaeR7I CTCGAG 1 cut(s) 1343
PdiI GCCGGC 1 cut(s) 778
PfeI GAWTC 1 cut(s) 1141
PflFI GACNNNGTC 1 cut(s) 329
PkrI GCNGC 6 cut(s) 119, 724, 1219, 1222, 1471, 1515
PleI GAGTC 1 cut(s) 590
PmaCI CACGTG 1 cut(s) 584
PmlI CACGTG 1 cut(s) 584
PpsI GAGTC 1 cut(s) 590
Ppu21I YACGTR 2 cut(s) 584, 796
PpuMI RGGWCCY 2 cut(s) 484, 1403
PshBI ATTAAT 1 cut(s) 846
PsiI TTATAA 1 cut(s) 605
Psp5II RGGWCCY 2 cut(s) 484, 1403
Psp6I CCWGG 4 cut(s) 363, 955, 1405, 1438
PspCI CACGTG 1 cut(s) 584
PspGI CCWGG 4 cut(s) 363, 955, 1405, 1438
PspN4I GGNNCC 5 cut(s) 193, 485, 486, 620, 1170
PspPI GGNCC 4 cut(s) 484, 998, 1168, 1403
PspPPI RGGWCCY 2 cut(s) 484, 1403
PspXI VCTCGAGB 1 cut(s) 1343
PstI CTGCAG 1 cut(s) 66
PsyI GACNNNGTC 1 cut(s) 329
PvuII CAGCTG 1 cut(s) 1217
RsaI GTAC 4 cut(s) 439, 794, 821, 1391
RsaNI GTAC 4 cut(s) 438, 793, 820, 1390
RseI CAYNNNNRTG 1 cut(s) 1597
SaqAI TTAA 4 cut(s) 356, 846, 1431, 1547
SatI GCNGC 6 cut(s) 118, 723, 1218, 1221, 1470, 1514
Sau3AI GATC 9 cut(s) 168, 412, 493, 831, 855, 1323, 1327, 1409, 1452
Sau96I GGNCC 4 cut(s) 484, 998, 1168, 1403
ScaI AGTACT 1 cut(s) 821
SchI GAGTC 1 cut(s) 590
ScrFI CCNGG 5 cut(s) 365, 634, 957, 1407, 1440
SduI GDGCHC 1 cut(s) 1373
SfaNI GCATC 4 cut(s) 310, 541, 700, 1456
SfcI CTRYAG 2 cut(s) 62, 1060
Sfr274I CTCGAG 1 cut(s) 1343
SfuI TTCGAA 2 cut(s) 985, 1027
SinI GGWCC 4 cut(s) 484, 998, 1168, 1403
SlaI CTCGAG 1 cut(s) 1343
SmiMI CAYNNNNRTG 1 cut(s) 1597
SmlI CTYRAG 2 cut(s) 224, 1343
SmoI CTYRAG 2 cut(s) 224, 1343
SnaBI TACGTA 1 cut(s) 796
Sse9I AATT 7 cut(s) 442, 645, 801, 1201, 1306, 1507, 1548
SsiI CCGC 6 cut(s) 25, 118, 300, 885, 1126, 1220
SspMI CTAG 2 cut(s) 312, 744
StyD4I CCNGG 5 cut(s) 363, 632, 955, 1405, 1438
StyI CCWWGG 1 cut(s) 1271
TaaI ACNGT 6 cut(s) 103, 286, 452, 982, 1249, 1483
TaiI ACGT 3 cut(s) 374, 586, 798
TaqI TCGA 9 cut(s) 524, 809, 985, 1027, 1139, 1162, 1286, 1326, 1344
TasI AATT 7 cut(s) 442, 645, 801, 1201, 1306, 1507, 1548
TatI WGTACW 2 cut(s) 819, 1389
TauI GCSGC 2 cut(s) 120, 1223
TfiI GAWTC 1 cut(s) 1141
Tru1I TTAA 4 cut(s) 356, 846, 1431, 1547
Tru9I TTAA 4 cut(s) 356, 846, 1431, 1547
TseFI GTSAC 3 cut(s) 558, 769, 919
TseI GCWGC 4 cut(s) 722, 1217, 1469, 1513
Tsp45I GTSAC 3 cut(s) 558, 769, 919
TspDTI ATGAA 5 cut(s) 654, 801, 1300, 1483, 1581
TspGWI ACGGA 4 cut(s) 66, 415, 1181, 1567
Tth111I GACNNNGTC 1 cut(s) 329
VpaK11BI GGWCC 4 cut(s) 484, 998, 1168, 1403
VspI ATTAAT 1 cut(s) 846
XagI CCTNNNNNAGG 2 cut(s) 626, 1521
XapI RAATTY 3 cut(s) 442, 645, 1306
XcmI CCANNNNNNNNNTGG 2 cut(s) 683, 1495
XhoI CTCGAG 1 cut(s) 1343
XmiI GTMKAC 1 cut(s) 972
XspI CTAG 2 cut(s) 312, 744
ZrmI AGTACT 1 cut(s) 821
Zsp2I ATGCAT 1 cut(s) 938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.