Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005369.1

Orthogroup ID

OG0000522

Physical Location & Seq

Genomic Coordinates Reverse (-)

26627 .. 30071

Gene Structure 3445 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005369.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

atgggttcacaaccattctctgtgttcaaactctcgactctcattcttcatcttattcccatcctttttgcctctcgatctttagctgcagagacaggttgtgaaactgatccagtatccaaagaaatcatttgcgaattcacccctaacccttcttattgcaagtccatgctacccaaccaaacaaacaatgtgtatgactacggccgttacgcggtccggaaatcattatcacaatcccataaattacttaacgtggtgaacaagtatctccaacgcaactcgactctctccaaaaccgcaatcctcgcccttgaagattgcaagcttcttgcagattcccagctcgaaagccgaggacgtccatacatggctcagtgccgtcctaacaaaccagcaaacctgcttggatggcgtacaagcaacttcttcatcatcttggaggatgtttctctagctctgttcacgaagggatgggtgcttgaaaatgaggaagaggaggagagggaggaggagggggaggtgatcacatggaggaaacggctacttcagaattttggtgacgtgctggtgagggagactgtcactgtgagtcaggacggaagtgggaatttcaccaccataaccgacgctgttgccgcagctccggttaacactaaaggtttaaatggttacttcttgatttatatcaaggctggagtttatgaagagtatgtgaacattgcaaatacgaaaaactatctgatgatgattggtgagggcatcaaccagactgtcataacaggcaatcggagtgttgtagatggctggacaactttcaattcagcaacatttgtggtaattgcaccatggtttgtagcagtgaacttaaccttccgcaacaccgccggagcaatcaaacaccaagccgtcgccgtccgaaacggtggagatttatccgcattctataattgcagcttcgaagggtaccaagacaccttatacacacattcccaaagacaattctacagagactgcaacgtctacggaacagtagacttcatatttggaaacgcagcagctgttttccaaaaatgtaacatttacccccggcttccgatgcgtgggcagttcaacgccattacggctcagggtcgagcagacccgaatcaaaacaccggcattatgatccacaactgtaccatcagagcatccgatgacttggcttcggacaagggaactaccaggacttatctagggaggccatggaaggagtattcaaggactgtgtacatgaaatccttcatggatggttgcatagatagggaaggttggagtaaatggactggagattttgctttaagcacattgtattacgccgagtataaatgtcagggccctggatcgaacactagcagaagagttgcatggccaggttaccatatattgaaaaaagctaagcaagctaaaaagtttacagtgtccaagttcttgcttgggaagaagtggctgcctcaaactggagtgccattttccggtggccttcaaatcccagaaaccactgccgcctaccttgaagatctcaactccagcagtccagaaccggcggccccactcccagaaccggccggcaaacccccgaaccggccaccggaagtagcaaaagtacctctgcctggttcaaagccttcctcaccacctcctgcagccatactcgaccacctgcagcgtctccaccccagaaactcggaaccggaaatttcaccaccggaaccggccaaaattcaaccgaaccagccaccggcgtcttcctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0008150 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

597

Amino Acids

66.39

Weight (kDa)

8.75

Isoelectric Point (pI)

45.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02810 AT2G47550 AT4G02330
fragaria_vesca	FvH4_2g25960 FvH4_2g25960 FvH4_2g25970 FvH4_5g35570 FvH4_5g35580 FvH4_5g35590
malus_domestica	MD03G1290900.v1.1 MD03G1291000.v1.1 MD08G1195600.v1.1 MD11G1307400.v1.1 MD11G1307500.v1.1
prunus_persica	Prupe.1G529400_v2.0.a1 Prupe.1G529500_v2.0.a1 Prupe.8G263900_v2.0.a1 Prupe.8G264000_v2.0.a1
pyrus_communis	pycom08g16800
rosa_chinensis	RchiOBHm_Chr6g0294321 RchiOBHm_Chr6g0294331 RchiOBHm_Chr7g0236951 RchiOBHm_Chr7g0236971 RchiOBHm_Chr7g0237041 RchiOBHm_Chr7g0237051
rosa_laevigata	RLG00000001034 RLG00000001035 RLG00000001039 RLG00000001043 RLG00000001045 RLG00000011880 RLG00000011881 RLG00000034181
rosa_multiflora	Rmu_co8086188.1_g000001 Rmu_co8458485.1_g000001 Rmu_sc0000272.1_g000007 Rmu_sc0000272.1_g000009 Rmu_sc0002131.1_g000030 Rmu_sc0002131.1_g000037 Rmu_sc0005369.1_g000005 Rmu_sc0005369.1_g000008 Rmu_sc0007991.1_g000005 Rmu_sc0007991.1_g000013 Rmu_sc0033563.1_g000001
rosa_roxburghii	Rroxscaffold_3G00224540 Rroxscaffold_3G00224600 Rroxscaffold_3G00224650 Rroxscaffold_3G00224660 Rroxscaffold_7G00173470 Rroxscaffold_7G00173480
rosa_rugosa	Rorug06G0243400 Rorug06G0243500 Rorug07G0301200 Rorug07G0301500 Rorug07G0301600
rosa_samantha	Rh6AG356000 Rh6AG356100 Rh6BG362600 Rh6BG362800 Rh6CG370000 Rh6CG370100 Rh6DG356500 Rh6DG356600 Rh7AG456200 Rh7AG456500 Rh7AG457500 Rh7AG457600 Rh7BG427500 Rh7BG427700 Rh7BG428400 Rh7BG428500 Rh7CG475100 Rh7CG475300 Rh7CG475700 Rh7CG475800 Rh7DG444100 Rh7DG444300 Rh7DG444700 Rh7DG444900
rosa_wichuraiana	Rw6G031020 Rw6G031030 Rw7G037870 Rw7G037880 Rw7G037920 Rw7G037940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1710
AasI	GACNNNNNNGTC	1 cut(s)	1019
AatII	GACGTC	1 cut(s)	364
Acc36I	ACCTGC	2 cut(s)	411, 1710
Acc65I	GGTACC	1 cut(s)	966
AccB1I	GGYRCC	1 cut(s)	966
AccI	GTMKAC	2 cut(s)	1023, 1035
AccII	CGCG	1 cut(s)	215
AccIII	TCCGGA	1 cut(s)	219
AciI	CCGC	8 cut(s)	215, 300, 639, 877, 885, 939, 1545, 1586
AclWI	GGATC	3 cut(s)	104, 1162, 1390
AcoI	YGGCCR	5 cut(s)	205, 1409, 1605, 1625, 1755
AcsI	RAATTY	5 cut(s)	137, 553, 610, 1737, 1761
AcuI	CTGAAG	1 cut(s)	533
AcyI	GRCGYC	2 cut(s)	361, 1784
AfaI	GTAC	5 cut(s)	418, 968, 1180, 1271, 1647
AfiI	CCNNNNNNNGG	9 cut(s)	214, 1103, 1499, 1514, 1603, 1623, 1630, 1655, 1780
AjiI	CACGTC	1 cut(s)	565
AjnI	CCWGG	4 cut(s)	1223, 1378, 1411, 1654
AluBI	AGCT	9 cut(s)	86, 328, 346, 458, 644, 957, 1061, 1436, 1445
AluI	AGCT	9 cut(s)	86, 328, 346, 458, 644, 957, 1061, 1436, 1445
Alw26I	GTCTC	4 cut(s)	86, 572, 1005, 1715
AlwI	GGATC	3 cut(s)	104, 1162, 1390
AlwNI	CAGNNNCTG	2 cut(s)	1014, 1061
Aor13HI	TCCGGA	1 cut(s)	219
AoxI	GGCC	9 cut(s)	205, 1241, 1375, 1409, 1519, 1587, 1605, 1625, 1755
ApaI	GGGCCC	1 cut(s)	1379
ApeKI	GCWGC	8 cut(s)	86, 641, 954, 1055, 1058, 1489, 1685, 1705
ApoI	RAATTY	5 cut(s)	137, 553, 610, 1737, 1761
ArsI	GACNNNNNNTTYG	2 cut(s)	1028, 1060
Asp700I	GAANNNNTTC	1 cut(s)	1280
Asp718I	GGTACC	1 cut(s)	966
AspS9I	GGNCC	4 cut(s)	217, 1375, 1376, 1588
AsuC2I	CCSGG	1 cut(s)	1090
AsuHPI	GGTGA	9 cut(s)	133, 271, 535, 572, 583, 607, 767, 1665, 1734
AsuII	TTCGAA	1 cut(s)	960
AvaII	GGWCC	1 cut(s)	217
BaeGI	GKGCMC	1 cut(s)	1379
BaeI	ACNNNNGTAYC	2 cut(s)	1162, 1195
BalI	TGGCCA	1 cut(s)	1411
BanI	GGYRCC	1 cut(s)	966
BanII	GRGCYC	1 cut(s)	1379
BbsI	GAAGAC	1 cut(s)	1779
BbvI	GCAGC	8 cut(s)	73, 653, 966, 1067, 1070, 1476, 1697, 1717
BccI	CCATC	6 cut(s)	68, 405, 468, 797, 1190, 1283
BceAI	ACGGC	7 cut(s)	192, 220, 366, 557, 893, 899, 1140
BcgI	CGANNNNNNTGC	2 cut(s)	617, 651
BciT130I	CCWGG	4 cut(s)	1225, 1380, 1413, 1656
BciVI	GTATCC	1 cut(s)	127
BclI	TGATCA	1 cut(s)	525
BcnI	CCSGG	1 cut(s)	1090
BcoDI	GTCTC	4 cut(s)	86, 572, 1005, 1715
BfaI	CTAG	3 cut(s)	455, 1235, 1392
BfmI	CTRYAG	4 cut(s)	87, 1006, 1683, 1703
BfuAI	ACCTGC	2 cut(s)	411, 1710
BfuI	GTATCC	1 cut(s)	127
BglI	GCCNNNNNGGC	1 cut(s)	1124
BglII	AGATCT	1 cut(s)	1558
BlpI	GCTNAGC	1 cut(s)	1437
Bme1390I	CCNGG	5 cut(s)	1090, 1225, 1380, 1413, 1656
Bme18I	GGWCC	1 cut(s)	217
BmgBI	CACGTC	1 cut(s)	565
BmgT120I	GGNCC	4 cut(s)	217, 1375, 1376, 1588
BmiI	GGNNCC	5 cut(s)	968, 1377, 1590, 1731, 1752
BmrFI	CCNGG	5 cut(s)	1090, 1225, 1380, 1413, 1656
BmsI	GCATC	3 cut(s)	771, 1089, 1199
BpiI	GAAGAC	1 cut(s)	1779
BpmI	CTGGAG	4 cut(s)	717, 1347, 1521, 1552
Bpu10I	CCTNAGC	1 cut(s)	1128
Bpu1102I	GCTNAGC	1 cut(s)	1437
Bpu14I	TTCGAA	1 cut(s)	960
BpuMI	CCSGG	1 cut(s)	1090
BsaBI	GATNNNNATC	1 cut(s)	686
BsaHI	GRCGYC	2 cut(s)	361, 1784
BsaJI	CCNNGG	5 cut(s)	355, 848, 1088, 1244, 1378
BsaWI	WCCGGW	6 cut(s)	219, 646, 1514, 1630, 1732, 1747
Bsc4I	CCNNNNNNNGG	9 cut(s)	214, 1103, 1499, 1514, 1603, 1623, 1630, 1655, 1780
Bse118I	RCCGGY	7 cut(s)	1157, 1582, 1603, 1607, 1623, 1753, 1780
Bse1I	ACTGG	3 cut(s)	113, 1330, 1504
Bse3DI	GCAATG	1 cut(s)	720
Bse8I	GATNNNNATC	1 cut(s)	686
BseAI	TCCGGA	1 cut(s)	219
BseBI	CCWGG	4 cut(s)	1225, 1380, 1413, 1656
BseDI	CCNNGG	5 cut(s)	355, 848, 1088, 1244, 1378
BseGI	GGATG	6 cut(s)	60, 416, 451, 479, 1190, 1294
BseJI	GATNNNNATC	1 cut(s)	686
BseLI	CCNNNNNNNGG	9 cut(s)	214, 1103, 1499, 1514, 1603, 1623, 1630, 1655, 1780
BseMI	GCAATG	1 cut(s)	720
BseMII	CTCAG	2 cut(s)	389, 1142
BseNI	ACTGG	3 cut(s)	113, 1330, 1504
BseRI	GAGGAG	4 cut(s)	512, 515, 524, 527
BseSI	GKGCMC	1 cut(s)	1379
BseX3I	CGGCCG	2 cut(s)	205, 1605
BseXI	GCAGC	8 cut(s)	73, 653, 966, 1067, 1070, 1476, 1697, 1717
BseYI	CCCAGC	1 cut(s)	342
Bsh1236I	CGCG	1 cut(s)	215
Bsh1285I	CGRYCG	2 cut(s)	208, 1608
BshFI	GGCC	9 cut(s)	207, 1243, 1377, 1411, 1521, 1589, 1607, 1627, 1757
BshNI	GGYRCC	1 cut(s)	966
BsiEI	CGRYCG	2 cut(s)	208, 1608
BslI	CCNNNNNNNGG	9 cut(s)	214, 1103, 1499, 1514, 1603, 1623, 1630, 1655, 1780
BsmAI	GTCTC	4 cut(s)	86, 572, 1005, 1715
BsmBI	CGTCTC	1 cut(s)	1715
BsmI	GAATGC	1 cut(s)	941
BsnI	GGCC	9 cut(s)	207, 1243, 1377, 1411, 1521, 1589, 1607, 1627, 1757
Bsp119I	TTCGAA	1 cut(s)	960
Bsp120I	GGGCCC	1 cut(s)	1375
Bsp1286I	GDGCHC	1 cut(s)	1379
Bsp13I	TCCGGA	1 cut(s)	219
Bsp1407I	TGTACA	1 cut(s)	1269
Bsp143I	GATC	6 cut(s)	77, 109, 525, 1167, 1382, 1558
Bsp1720I	GCTNAGC	1 cut(s)	1437
Bsp19I	CCATGG	2 cut(s)	848, 1244
BspACI	CCGC	8 cut(s)	215, 300, 639, 877, 885, 939, 1545, 1586
BspANI	GGCC	9 cut(s)	207, 1243, 1377, 1411, 1521, 1589, 1607, 1627, 1757
BspCNI	CTCAG	2 cut(s)	388, 1141
BspEI	TCCGGA	1 cut(s)	219
BspFNI	CGCG	1 cut(s)	215
BspLI	GGNNCC	5 cut(s)	968, 1377, 1590, 1731, 1752
BspMAI	CTGCAG	3 cut(s)	91, 1687, 1707
BspMI	ACCTGC	2 cut(s)	411, 1710
BspPI	GGATC	3 cut(s)	104, 1162, 1390
BspT104I	TTCGAA	1 cut(s)	960
BspT107I	GGYRCC	1 cut(s)	966
BsrDI	GCAATG	1 cut(s)	720
BsrFI	RCCGGY	7 cut(s)	1157, 1582, 1603, 1607, 1623, 1753, 1780
BsrGI	TGTACA	1 cut(s)	1269
BsrI	ACTGG	3 cut(s)	113, 1330, 1504
BssAI	RCCGGY	7 cut(s)	1157, 1582, 1603, 1607, 1623, 1753, 1780
BssECI	CCNNGG	5 cut(s)	355, 848, 1088, 1244, 1378
BssMI	GATC	6 cut(s)	77, 109, 525, 1167, 1382, 1558
BssNI	GRCGYC	2 cut(s)	361, 1784
BssT1I	CCWWGG	2 cut(s)	848, 1244
Bst2UI	CCWGG	4 cut(s)	1225, 1380, 1413, 1656
Bst4CI	ACNGT	8 cut(s)	583, 589, 775, 926, 1033, 1178, 1267, 1459
Bst6I	CTCTTC	3 cut(s)	489, 702, 1393
BstACI	GRCGYC	2 cut(s)	361, 1784
BstAUI	TGTACA	1 cut(s)	1269
BstBI	TTCGAA	1 cut(s)	960
BstC8I	GCNNGC	3 cut(s)	326, 1443, 1609
BstDEI	CTNAG	3 cut(s)	375, 1128, 1437
BstDSI	CCRYGG	2 cut(s)	848, 1244
BstEII	GGTNACC	1 cut(s)	1415
BstF5I	GGATG	6 cut(s)	60, 416, 451, 479, 1190, 1294
BstFNI	CGCG	1 cut(s)	215
BstKTI	GATC	6 cut(s)	80, 112, 528, 1170, 1385, 1561
BstMAI	GTCTC	4 cut(s)	86, 572, 1005, 1715
BstMBI	GATC	6 cut(s)	77, 109, 525, 1167, 1382, 1558
BstMCI	CGRYCG	2 cut(s)	208, 1608
BstMWI	GCNNNNNNNGC	6 cut(s)	308, 412, 638, 1099, 1124, 1442
BstNI	CCWGG	4 cut(s)	1225, 1380, 1413, 1656
BstPI	GGTNACC	1 cut(s)	1415
BstSCI	CCNGG	5 cut(s)	1088, 1223, 1378, 1411, 1654
BstSFI	CTRYAG	4 cut(s)	87, 1006, 1683, 1703
BstSLI	GKGCMC	1 cut(s)	1379
BstUI	CGCG	1 cut(s)	215
BstV1I	GCAGC	8 cut(s)	73, 653, 966, 1067, 1070, 1476, 1697, 1717
BstV2I	GAAGAC	1 cut(s)	1779
BstX2I	RGATCY	1 cut(s)	1558
BstYI	RGATCY	1 cut(s)	1558
BstZI	CGGCCG	2 cut(s)	205, 1605
BsuI	GTATCC	1 cut(s)	127
BsuRI	GGCC	9 cut(s)	207, 1243, 1377, 1411, 1521, 1589, 1607, 1627, 1757
BtgI	CCRYGG	2 cut(s)	848, 1244
BtrI	CACGTC	1 cut(s)	565
BtsCI	GGATG	6 cut(s)	60, 416, 451, 479, 1190, 1294
BtsI	GCAGTG	2 cut(s)	867, 1539
BtsIMutI	CAGTG	5 cut(s)	383, 585, 867, 1464, 1539
BveI	ACCTGC	2 cut(s)	411, 1710
Cac8I	GCNNGC	3 cut(s)	326, 1443, 1609
CaiI	CAGNNNCTG	2 cut(s)	1014, 1061
Cfr10I	RCCGGY	7 cut(s)	1157, 1582, 1603, 1607, 1623, 1753, 1780
Cfr13I	GGNCC	4 cut(s)	217, 1375, 1376, 1588
CpoI	CGGWCCG	1 cut(s)	217
CseI	GACGC	3 cut(s)	638, 1697, 1773
Csp6I	GTAC	5 cut(s)	417, 967, 1179, 1270, 1646
CspCI	CAANNNNNGTGG	2 cut(s)	816, 851
CspI	CGGWCCG	1 cut(s)	217
CviAII	CATG	8 cut(s)	169, 370, 531, 849, 1245, 1273, 1285, 1407
CviQI	GTAC	5 cut(s)	417, 967, 1179, 1270, 1646
DdeI	CTNAG	3 cut(s)	375, 1128, 1437
DpnI	GATC	6 cut(s)	79, 111, 527, 1169, 1384, 1560
DpnII	GATC	6 cut(s)	77, 109, 525, 1167, 1382, 1558
DraI	TTTAAA	1 cut(s)	666
DrdI	GACNNNNNNGTC	1 cut(s)	1019
DseDI	GACNNNNNNGTC	1 cut(s)	1019
EaeI	YGGCCR	5 cut(s)	205, 1409, 1605, 1625, 1755
EagI	CGGCCG	2 cut(s)	205, 1605
Eam1104I	CTCTTC	3 cut(s)	489, 702, 1393
EarI	CTCTTC	3 cut(s)	489, 702, 1393
EclXI	CGGCCG	2 cut(s)	205, 1605
Eco130I	CCWWGG	2 cut(s)	848, 1244
Eco24I	GRGCYC	1 cut(s)	1379
Eco47I	GGWCC	1 cut(s)	217
Eco52I	CGGCCG	2 cut(s)	205, 1605
Eco57I	CTGAAG	1 cut(s)	533
Eco91I	GGTNACC	1 cut(s)	1415
EcoO109I	RGGNCCY	2 cut(s)	1375, 1376
EcoO65I	GGTNACC	1 cut(s)	1415
EcoRI	GAATTC	1 cut(s)	137
EcoRII	CCWGG	4 cut(s)	1223, 1378, 1411, 1654
EcoT14I	CCWWGG	2 cut(s)	848, 1244
EcoT38I	GRGCYC	1 cut(s)	1379
ErhI	CCWWGG	2 cut(s)	848, 1244
Esp3I	CGTCTC	1 cut(s)	1715
FaeI	CATG	8 cut(s)	172, 373, 534, 852, 1248, 1276, 1288, 1410
FatI	CATG	8 cut(s)	168, 369, 530, 848, 1244, 1272, 1284, 1406
FbaI	TGATCA	1 cut(s)	525
FblI	GTMKAC	2 cut(s)	1023, 1035
FokI	GGATG	6 cut(s)	47, 423, 458, 486, 1177, 1301
FriOI	GRGCYC	1 cut(s)	1379
FspBI	CTAG	3 cut(s)	455, 1235, 1392
GsaI	CCCAGC	1 cut(s)	346
GsuI	CTGGAG	4 cut(s)	717, 1347, 1521, 1552
HaeIII	GGCC	9 cut(s)	207, 1243, 1377, 1411, 1521, 1589, 1607, 1627, 1757
HgaI	GACGC	3 cut(s)	638, 1697, 1773
Hin1I	GRCGYC	2 cut(s)	361, 1784
Hin1II	CATG	8 cut(s)	172, 373, 534, 852, 1248, 1276, 1288, 1410
HincII	GTYRAC	1 cut(s)	652
HindII	GTYRAC	1 cut(s)	652
HindIII	AAGCTT	1 cut(s)	326
HinfI	GANTC	5 cut(s)	37, 286, 338, 592, 1147
HpaI	GTTAAC	1 cut(s)	652
HphI	GGTGA	9 cut(s)	133, 271, 535, 572, 583, 607, 767, 1665, 1734
Hpy188I	TCNGA	9 cut(s)	552, 744, 792, 920, 1098, 1187, 1195, 1210, 1729
Hpy188III	TCNNGA	8 cut(s)	34, 75, 220, 466, 596, 679, 1577, 1791
Hpy99I	CGWCG	2 cut(s)	632, 914
HpyAV	CCTTC	9 cut(s)	162, 463, 883, 956, 1243, 1291, 1301, 1532, 1677
HpyCH4III	ACNGT	8 cut(s)	583, 589, 775, 926, 1033, 1178, 1267, 1459
HpyCH4IV	ACGT	4 cut(s)	255, 361, 564, 1020
HpyF10VI	GCNNNNNNNGC	6 cut(s)	308, 412, 638, 1099, 1124, 1442
HpyF3I	CTNAG	3 cut(s)	375, 1128, 1437
HpySE526I	ACGT	4 cut(s)	255, 361, 564, 1020
Hsp92I	GRCGYC	2 cut(s)	361, 1784
Hsp92II	CATG	8 cut(s)	172, 373, 534, 852, 1248, 1276, 1288, 1410
Kpn2I	TCCGGA	1 cut(s)	219
KpnI	GGTACC	1 cut(s)	970
KroI	GCCGGC	1 cut(s)	1607
KroNI	GCCGGC	1 cut(s)	1609
Ksp22I	TGATCA	1 cut(s)	525
KspAI	GTTAAC	1 cut(s)	652
Kzo9I	GATC	6 cut(s)	77, 109, 525, 1167, 1382, 1558
LmnI	GCTCC	2 cut(s)	649, 890
Lsp1109I	GCAGC	8 cut(s)	73, 653, 966, 1067, 1070, 1476, 1697, 1717
LweI	GCATC	3 cut(s)	771, 1089, 1199
MaeI	CTAG	3 cut(s)	455, 1235, 1392
MaeII	ACGT	4 cut(s)	255, 361, 564, 1020
MaeIII	GTNAC	6 cut(s)	209, 560, 583, 671, 1076, 1415
MalI	GATC	6 cut(s)	79, 111, 527, 1169, 1384, 1560
MboI	GATC	6 cut(s)	77, 109, 525, 1167, 1382, 1558
MboII	GAAGA	9 cut(s)	38, 329, 421, 506, 719, 1410, 1492, 1568, 1779
MflI	RGATCY	1 cut(s)	1558
MhlI	GDGCHC	1 cut(s)	1379
MlsI	TGGCCA	1 cut(s)	1411
MluNI	TGGCCA	1 cut(s)	1411
MlyI	GAGTC	3 cut(s)	31, 280, 601
MmeI	TCCRAC	2 cut(s)	298, 1292
Mox20I	TGGCCA	1 cut(s)	1411
MroI	TCCGGA	1 cut(s)	219
MroNI	GCCGGC	1 cut(s)	1607
MroXI	GAANNNNTTC	1 cut(s)	1280
MscI	TGGCCA	1 cut(s)	1411
MseI	TTAA	5 cut(s)	252, 651, 665, 869, 1340
Msp20I	TGGCCA	1 cut(s)	1411
MspA1I	CMGCKG	1 cut(s)	1061
MspR9I	CCNGG	5 cut(s)	1090, 1225, 1380, 1413, 1656
Mva1269I	GAATGC	1 cut(s)	941
MvaI	CCWGG	4 cut(s)	1225, 1380, 1413, 1656
MvnI	CGCG	1 cut(s)	215
MwoI	GCNNNNNNNGC	6 cut(s)	308, 412, 638, 1099, 1124, 1442
NaeI	GCCGGC	1 cut(s)	1609
NciI	CCSGG	1 cut(s)	1090
NcoI	CCATGG	2 cut(s)	848, 1244
NdeII	GATC	6 cut(s)	77, 109, 525, 1167, 1382, 1558
NgoMIV	GCCGGC	1 cut(s)	1607
NlaIII	CATG	8 cut(s)	172, 373, 534, 852, 1248, 1276, 1288, 1410
NlaIV	GGNNCC	5 cut(s)	968, 1377, 1590, 1731, 1752
NmeAIII	GCCGAG	2 cut(s)	380, 1384
NmuCI	GTSAC	2 cut(s)	560, 583
NspV	TTCGAA	1 cut(s)	960
PaqCI	CACCTGC	1 cut(s)	1710
PctI	GAATGC	1 cut(s)	941
PdiI	GCCGGC	1 cut(s)	1609
PdmI	GAANNNNTTC	1 cut(s)	1280
PfeI	GAWTC	2 cut(s)	338, 1147
PleI	GAGTC	3 cut(s)	31, 280, 600
PpsI	GAGTC	3 cut(s)	31, 280, 600
Psp6I	CCWGG	4 cut(s)	1223, 1378, 1411, 1654
PspEI	GGTNACC	1 cut(s)	1415
PspFI	CCCAGC	1 cut(s)	342
PspGI	CCWGG	4 cut(s)	1223, 1378, 1411, 1654
PspN4I	GGNNCC	5 cut(s)	968, 1377, 1590, 1731, 1752
PspOMI	GGGCCC	1 cut(s)	1375
PspPI	GGNCC	4 cut(s)	217, 1375, 1376, 1588
PstI	CTGCAG	3 cut(s)	91, 1687, 1707
PstNI	CAGNNNCTG	2 cut(s)	1014, 1061
PsuI	RGATCY	1 cut(s)	1558
PvuII	CAGCTG	1 cut(s)	1061
RsaI	GTAC	5 cut(s)	418, 968, 1180, 1271, 1647
RsaNI	GTAC	5 cut(s)	417, 967, 1179, 1270, 1646
Rsr2I	CGGWCCG	1 cut(s)	217
RsrII	CGGWCCG	1 cut(s)	217
SaqAI	TTAA	5 cut(s)	252, 651, 665, 869, 1340
Sau3AI	GATC	6 cut(s)	77, 109, 525, 1167, 1382, 1558
Sau96I	GGNCC	4 cut(s)	217, 1375, 1376, 1588
SchI	GAGTC	3 cut(s)	31, 280, 601
ScrFI	CCNGG	5 cut(s)	1090, 1225, 1380, 1413, 1656
SduI	GDGCHC	1 cut(s)	1379
SfaNI	GCATC	3 cut(s)	771, 1089, 1199
SfcI	CTRYAG	4 cut(s)	87, 1006, 1683, 1703
SfuI	TTCGAA	1 cut(s)	960
SgrAI	CRCCGGYG	1 cut(s)	1780
SinI	GGWCC	1 cut(s)	217
SsiI	CCGC	8 cut(s)	215, 300, 639, 877, 885, 939, 1545, 1586
SspMI	CTAG	3 cut(s)	455, 1235, 1392
StyD4I	CCNGG	5 cut(s)	1088, 1223, 1378, 1411, 1654
StyI	CCWWGG	2 cut(s)	848, 1244
TaaI	ACNGT	8 cut(s)	583, 589, 775, 926, 1033, 1178, 1267, 1459
TaiI	ACGT	4 cut(s)	258, 364, 567, 1023
TaqI	TCGA	8 cut(s)	35, 76, 284, 348, 960, 1135, 1385, 1695
TatI	WGTACW	1 cut(s)	1269
TauI	GCSGC	3 cut(s)	641, 1547, 1589
TfiI	GAWTC	2 cut(s)	338, 1147
Tru1I	TTAA	5 cut(s)	252, 651, 665, 869, 1340
Tru9I	TTAA	5 cut(s)	252, 651, 665, 869, 1340
TscAI	CASTG	5 cut(s)	383, 592, 867, 1464, 1546
TseFI	GTSAC	2 cut(s)	560, 583
TseI	GCWGC	8 cut(s)	86, 641, 954, 1055, 1058, 1489, 1685, 1705
Tsp45I	GTSAC	2 cut(s)	560, 583
TspDTI	ATGAA	6 cut(s)	38, 421, 720, 1030, 1273, 1289
TspGWI	ACGGA	2 cut(s)	615, 1041
TspRI	CASTG	5 cut(s)	383, 592, 867, 1464, 1546
VpaK11BI	GGWCC	1 cut(s)	217
XapI	RAATTY	5 cut(s)	137, 553, 610, 1737, 1761
XmiI	GTMKAC	2 cut(s)	1023, 1035
XmnI	GAANNNNTTC	1 cut(s)	1280
XspI	CTAG	3 cut(s)	455, 1235, 1392
ZraI	GACGTC	1 cut(s)	362

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.