Rorug06G0243500

pectinesterase pectinesterase inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000522
Physical Location & Seq
Forward (+)
38729622 .. 38732047
2426 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0243500.1

Sequence Viewer

Length: 1512 bp
ATGAGTCCTTCAACAATAATGACCATCCTCTTGGTTCTCCTCACATGCCTTTGGTCACTCATCTCTGCCTCCTCAAAATCAAAACACAGAAAACTACCACCCGGCCCTCGGTCACTGCCAATAACGGGAAACCTCCATATGCTAGGCAACCTCCCCCATCGAAGCCTCCAACAATTGGCCAAAAAATATGGACACATCATGTCCATTCGTCTAGGCAATGTTTCTACCATAGTAGTCTCCTCCCCACAAGCCGCAGAGCTATTCCTCAAAACTCATGACACCAATTTCGCCAGCCGGCCCAAAATCCAAGCCTCAGAGTACCTGTCCTACGGCACAAAGGGCATGGCCTTTTCCCAGTACGGTCCCTATTGGCGCCATATGAGGAAGCTCTGCACGCTTCATCTCTTCTGTCCAGCAAAAATGGAGGCTTTCAGGCCGCTGCGAAAGGAGGAACTGGGACTGCTGGTAAGAAAGCTGAAGAGAGCTGCAGAGGAAGGTGGAGTCGTGGATGTTAGTGAGGAGATTGGTGTGATGAATGAGGACATAACGTATAGGATGGTGTTGGGCTGTAAAAGGGATGATAGGTTTGATTTGAAAGCCATTGTTGAGGAAACGCTTTTCTTGACTGGGGCTTTCAATATATCTGATTTTGTTCCTTCCCTTGCCGCACTGGATATTCAGGGATTGACCAAGCGCTTAAAGAAAGTTAGCAAGACGATCGATCAACTCCTGGAGAAGATAATAGACGAGCATGAACAAGTTGCCAACACTAGGAGTGGGAAACAAGGCCATGAGGACTTTGTAGACGTGTTGCTTTCGTTAACGAACCAACCGTTGAACCCGAATGATGAGCAAGTACACTTTCTTGATCGAACAAATGTGAAAGCCATCTTACTAGACATGATCTCGGCGGCTTTTGATACTTCGGCCACATCGATTGTTTGGAGCCTTGCCGAGCTCTTGAGGCATCCAAGGATCATGAAGAATCTGCAAGAAGAGCTCCAAAGTGTGGTTGGTATGGACCGAATGGTGGAAGAATCTGATTTGCCCAAGCTGGATTACTTGAGTATGGTGGTGAAGGAGAGCTTCAGACTACACCCAGTTGCACCGTTACTAATCCCACATGAATCCATCGAGGGCATTACAATCGATGGATATGACATTCCCAAGAAGTCGCGGATCATAGTAAACATCTGGAGCATTGGAAGAGATCCTAATGTTTGGTCCGAAAATGTTGAGGAATTTTATCCTGAAAGGTTCATGAACAAAAATATAGACCTCCGGGGACATGACTTTCAGCTCATCCCATTTGGGTCTGGGCGCAGACGGTGTCCGGGTATGCAATTAGGACTAACCACAGTTCAGCTAGTTCTGGCACAGCTGGTGCACTGCTTTAACTGGGAGCTCCCAAATGGCTTGGTACCTCAAGACTTGGACATGTCCGAGGATTTCGGCTTATCACTGTCAAAAGCCAAACACTTGCTTGCAAAGCCAACGTACCGTCTTATGTAG

Protein Analysis

503

Amino Acids

56.92

Weight (kDa)

8.11

Isoelectric Point (pI)

45.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 33 - 491 4.6e-105 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000522)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02810 AT2G47550 AT4G02330
fragaria_vesca FvH4_2g25960 FvH4_2g25960 FvH4_2g25970 FvH4_5g35570 FvH4_5g35580 FvH4_5g35590
malus_domestica MD03G1290900.v1.1 MD03G1291000.v1.1 MD08G1195600.v1.1 MD11G1307400.v1.1 MD11G1307500.v1.1
prunus_persica Prupe.1G529400_v2.0.a1 Prupe.1G529500_v2.0.a1 Prupe.8G263900_v2.0.a1 Prupe.8G264000_v2.0.a1
pyrus_communis pycom08g16800
rosa_chinensis RchiOBHm_Chr6g0294321 RchiOBHm_Chr6g0294331 RchiOBHm_Chr7g0236951 RchiOBHm_Chr7g0236971 RchiOBHm_Chr7g0237041 RchiOBHm_Chr7g0237051
rosa_laevigata RLG00000001034 RLG00000001035 RLG00000001039 RLG00000001043 RLG00000001045 RLG00000011880 RLG00000011881 RLG00000034181
rosa_multiflora Rmu_co8086188.1_g000001 Rmu_co8458485.1_g000001 Rmu_sc0000272.1_g000007 Rmu_sc0000272.1_g000009 Rmu_sc0002131.1_g000030 Rmu_sc0002131.1_g000037 Rmu_sc0005369.1_g000005 Rmu_sc0005369.1_g000008 Rmu_sc0007991.1_g000005 Rmu_sc0007991.1_g000013 Rmu_sc0033563.1_g000001
rosa_roxburghii Rroxscaffold_3G00224540 Rroxscaffold_3G00224600 Rroxscaffold_3G00224650 Rroxscaffold_3G00224660 Rroxscaffold_7G00173470 Rroxscaffold_7G00173480
rosa_rugosa Rorug06G0243400 Rorug06G0243500 Rorug07G0301200 Rorug07G0301500 Rorug07G0301600
rosa_samantha Rh6AG356000 Rh6AG356100 Rh6BG362600 Rh6BG362800 Rh6CG370000 Rh6CG370100 Rh6DG356500 Rh6DG356600 Rh7AG456200 Rh7AG456500 Rh7AG457500 Rh7AG457600 Rh7BG427500 Rh7BG427700 Rh7BG428400 Rh7BG428500 Rh7CG475100 Rh7CG475300 Rh7CG475700 Rh7CG475800 Rh7DG444100 Rh7DG444300 Rh7DG444700 Rh7DG444900
rosa_wichuraiana Rw6G031020 Rw6G031030 Rw7G037870 Rw7G037880 Rw7G037920 Rw7G037940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1420
AccB1I GGYRCC 2 cut(s) 372, 1420
AccB7I CCANNNNNTGG 2 cut(s) 175, 1009
AccI GTMKAC 1 cut(s) 804
AccII CGCG 1 cut(s) 1177
AciI CCGC 5 cut(s) 252, 437, 666, 911, 1177
AclWI GGATC 3 cut(s) 983, 1187, 1205
AcoI YGGCCR 2 cut(s) 177, 927
AcsI RAATTY 1 cut(s) 1241
AcuI CTGAAG 2 cut(s) 497, 1072
AcyI GRCGYC 1 cut(s) 373
AfaI GTAC 5 cut(s) 320, 359, 858, 1422, 1499
AfeI AGCGCT 1 cut(s) 695
AfiI CCNNNNNNNGG 6 cut(s) 108, 125, 175, 771, 1009, 1030
AflIII ACRYGT 2 cut(s) 807, 1437
AgsI TTSAA 4 cut(s) 12, 595, 637, 838
AjiI CACGTC 1 cut(s) 808
AjnI CCWGG 1 cut(s) 729
Alw21I GWGCWC 4 cut(s) 960, 1002, 1389, 1407
Alw26I GTCTC 1 cut(s) 241
Alw44I GTGCAC 1 cut(s) 1385
AlwI GGATC 3 cut(s) 983, 1187, 1205
Aor51HI AGCGCT 1 cut(s) 695
AoxI GGCC 7 cut(s) 103, 177, 296, 345, 434, 787, 927
ApaLI GTGCAC 1 cut(s) 1385
ApeKI GCWGC 2 cut(s) 439, 485
ApoI RAATTY 1 cut(s) 1241
ArsI GACNNNNNNTTYG 2 cut(s) 269, 301
Asp718I GGTACC 1 cut(s) 1420
AspLEI GCGC 3 cut(s) 375, 696, 1323
AspS9I GGNCC 5 cut(s) 104, 297, 362, 1021, 1224
AsuC2I CCSGG 3 cut(s) 102, 1283, 1335
AsuHPI GGTGA 1 cut(s) 1087
AvaII GGWCC 3 cut(s) 362, 1021, 1224
BaeGI GKGCMC 1 cut(s) 1389
BalI TGGCCA 1 cut(s) 179
BanI GGYRCC 2 cut(s) 372, 1420
BanII GRGCYC 3 cut(s) 960, 1002, 1407
Bbv12I GWGCWC 4 cut(s) 960, 1002, 1389, 1407
BbvI GCAGC 2 cut(s) 426, 472
BccI CCATC 6 cut(s) 32, 165, 550, 896, 1139, 1145
BceAI ACGGC 1 cut(s) 346
BcgI CGANNNNNNTGC 4 cut(s) 700, 734, 1129, 1163
BciT130I CCWGG 1 cut(s) 731
BcnI CCSGG 3 cut(s) 102, 1283, 1335
BcoDI GTCTC 1 cut(s) 241
BfaI CTAG 5 cut(s) 143, 212, 771, 896, 1367
BfmI CTRYAG 1 cut(s) 486
BfoI RGCGCY 2 cut(s) 376, 697
BisI GCNGC 6 cut(s) 252, 437, 440, 486, 666, 912
BlsI GCNGC 6 cut(s) 253, 438, 441, 487, 667, 913
Bme1390I CCNGG 4 cut(s) 102, 731, 1283, 1335
Bme18I GGWCC 3 cut(s) 362, 1021, 1224
BmgBI CACGTC 1 cut(s) 808
BmgT120I GGNCC 5 cut(s) 104, 297, 362, 1021, 1224
BmiI GGNNCC 4 cut(s) 364, 374, 947, 1422
BmrFI CCNGG 4 cut(s) 102, 731, 1283, 1335
BmrI ACTGGG 5 cut(s) 349, 464, 636, 1094, 1408
BmsI GCATC 1 cut(s) 976
BmuI ACTGGG 5 cut(s) 349, 464, 636, 1094, 1408
BpmI CTGGAG 2 cut(s) 752, 1216
BpuEI CTTGAG 3 cut(s) 982, 1084, 1410
BpuMI CCSGG 3 cut(s) 102, 1283, 1335
Bsa29I ATCGAT 3 cut(s) 720, 935, 1149
BsaHI GRCGYC 1 cut(s) 373
BsaJI CCNNGG 4 cut(s) 107, 971, 1282, 1443
Bsc4I CCNNNNNNNGG 6 cut(s) 108, 125, 175, 771, 1009, 1030
Bse118I RCCGGY 1 cut(s) 294
Bse1I ACTGG 6 cut(s) 355, 459, 631, 675, 1100, 1403
Bse3DI GCAATG 1 cut(s) 223
BseBI CCWGG 1 cut(s) 731
BseCI ATCGAT 3 cut(s) 720, 935, 1149
BseDI CCNNGG 4 cut(s) 107, 971, 1282, 1443
BseGI GGATG 6 cut(s) 24, 514, 561, 583, 967, 1302
BseLI CCNNNNNNNGG 6 cut(s) 108, 125, 175, 771, 1009, 1030
BseMI GCAATG 1 cut(s) 223
BseMII CTCAG 1 cut(s) 327
BseNI ACTGG 6 cut(s) 355, 459, 631, 675, 1100, 1403
BseRI GAGGAG 4 cut(s) 29, 61, 229, 533
BseSI GKGCMC 1 cut(s) 1389
BseXI GCAGC 2 cut(s) 426, 472
BsgI GTGCAG 1 cut(s) 376
Bsh1236I CGCG 1 cut(s) 1177
Bsh1285I CGRYCG 1 cut(s) 720
BshFI GGCC 7 cut(s) 105, 179, 298, 347, 436, 789, 929
BshNI GGYRCC 2 cut(s) 372, 1420
BshVI ATCGAT 3 cut(s) 720, 935, 1149
BsiEI CGRYCG 1 cut(s) 720
BsiHKAI GWGCWC 4 cut(s) 960, 1002, 1389, 1407
BsiSI CCGG 4 cut(s) 102, 295, 1282, 1334
BslFI GGGAC 3 cut(s) 348, 471, 1299
BslI CCNNNNNNNGG 6 cut(s) 108, 125, 175, 771, 1009, 1030
BsmAI GTCTC 1 cut(s) 241
BsmFI GGGAC 3 cut(s) 348, 471, 1299
BsnI GGCC 7 cut(s) 105, 179, 298, 347, 436, 789, 929
Bsp1286I GDGCHC 4 cut(s) 960, 1002, 1389, 1407
Bsp143I GATC 7 cut(s) 717, 721, 868, 903, 975, 1179, 1210
BspACI CCGC 5 cut(s) 252, 437, 666, 911, 1177
BspANI GGCC 7 cut(s) 105, 179, 298, 347, 436, 789, 929
BspCNI CTCAG 1 cut(s) 326
BspDI ATCGAT 3 cut(s) 720, 935, 1149
BspFNI CGCG 1 cut(s) 1177
BspHI TCATGA 3 cut(s) 274, 978, 1260
BspLI GGNNCC 4 cut(s) 364, 374, 947, 1422
BspMAI CTGCAG 1 cut(s) 490
BspPI GGATC 3 cut(s) 983, 1187, 1205
BspQI GCTCTTC 1 cut(s) 990
BspT107I GGYRCC 2 cut(s) 372, 1420
BsrDI GCAATG 1 cut(s) 223
BsrFI RCCGGY 1 cut(s) 294
BsrI ACTGG 6 cut(s) 355, 459, 631, 675, 1100, 1403
BssAI RCCGGY 1 cut(s) 294
BssECI CCNNGG 4 cut(s) 107, 971, 1282, 1443
BssMI GATC 7 cut(s) 717, 721, 868, 903, 975, 1179, 1210
BssNI GRCGYC 1 cut(s) 373
BssT1I CCWWGG 1 cut(s) 971
Bst2UI CCWGG 1 cut(s) 731
Bst4CI ACNGT 7 cut(s) 362, 834, 1110, 1329, 1360, 1464, 1502
Bst6I CTCTTC 4 cut(s) 410, 473, 990, 1201
BstACI GRCGYC 1 cut(s) 373
BstC8I GCNNGC 4 cut(s) 292, 296, 395, 1485
BstDEI CTNAG 1 cut(s) 313
BstF5I GGATG 6 cut(s) 24, 514, 561, 583, 967, 1302
BstFNI CGCG 1 cut(s) 1177
BstH2I RGCGCY 2 cut(s) 376, 697
BstHHI GCGC 3 cut(s) 375, 696, 1323
BstKTI GATC 7 cut(s) 720, 724, 871, 906, 978, 1182, 1213
BstMAI GTCTC 1 cut(s) 241
BstMBI GATC 7 cut(s) 717, 721, 868, 903, 975, 1179, 1210
BstMCI CGRYCG 1 cut(s) 720
BstMWI GCNNNNNNNGC 5 cut(s) 339, 394, 964, 997, 1489
BstNI CCWGG 1 cut(s) 731
BstNSI RCATGY 2 cut(s) 48, 1441
BstSCI CCNGG 4 cut(s) 100, 729, 1281, 1333
BstSFI CTRYAG 1 cut(s) 486
BstSLI GKGCMC 1 cut(s) 1389
BstUI CGCG 1 cut(s) 1177
BstV1I GCAGC 2 cut(s) 426, 472
BstX2I RGATCY 1 cut(s) 1210
BstXI CCANNNNNNTGG 1 cut(s) 31
BstYI RGATCY 1 cut(s) 1210
Bsu15I ATCGAT 3 cut(s) 720, 935, 1149
BsuRI GGCC 7 cut(s) 105, 179, 298, 347, 436, 789, 929
BsuTUI ATCGAT 3 cut(s) 720, 935, 1149
BtrI CACGTC 1 cut(s) 808
BtsCI GGATG 6 cut(s) 24, 514, 561, 583, 967, 1302
BtsI GCAGTG 2 cut(s) 113, 1387
BtsIMutI CAGTG 4 cut(s) 113, 668, 1387, 1460
Cac8I GCNNGC 4 cut(s) 292, 296, 395, 1485
CciI TCATGA 3 cut(s) 274, 978, 1260
CfoI GCGC 3 cut(s) 375, 696, 1323
Cfr10I RCCGGY 1 cut(s) 294
Cfr13I GGNCC 5 cut(s) 104, 297, 362, 1021, 1224
ClaI ATCGAT 3 cut(s) 720, 935, 1149
Csp6I GTAC 5 cut(s) 319, 358, 857, 1421, 1498
CspCI CAANNNNNGTGG 2 cut(s) 919, 954
CviQI GTAC 5 cut(s) 319, 358, 857, 1421, 1498
DdeI CTNAG 1 cut(s) 313
DinI GGCGCC 1 cut(s) 374
DpnI GATC 7 cut(s) 719, 723, 870, 905, 977, 1181, 1212
DpnII GATC 7 cut(s) 717, 721, 868, 903, 975, 1179, 1210
EaeI YGGCCR 2 cut(s) 177, 927
Eam1104I CTCTTC 4 cut(s) 410, 473, 990, 1201
EarI CTCTTC 4 cut(s) 410, 473, 990, 1201
Ecl136II GAGCTC 3 cut(s) 958, 1000, 1405
Eco130I CCWWGG 1 cut(s) 971
Eco24I GRGCYC 3 cut(s) 960, 1002, 1407
Eco47I GGWCC 3 cut(s) 362, 1021, 1224
Eco47III AGCGCT 1 cut(s) 695
Eco53kI GAGCTC 3 cut(s) 958, 1000, 1405
Eco57I CTGAAG 2 cut(s) 497, 1072
EcoICRI GAGCTC 3 cut(s) 958, 1000, 1405
EcoRII CCWGG 1 cut(s) 729
EcoT14I CCWWGG 1 cut(s) 971
EcoT38I GRGCYC 3 cut(s) 960, 1002, 1407
EgeI GGCGCC 1 cut(s) 374
EheI GGCGCC 1 cut(s) 374
ErhI CCWWGG 1 cut(s) 971
FalI AAGNNNNNCTT 2 cut(s) 1070, 1102
FaqI GGGAC 3 cut(s) 348, 471, 1299
FauNDI CATATG 2 cut(s) 138, 378
FblI GTMKAC 1 cut(s) 804
Fnu4HI GCNGC 6 cut(s) 252, 437, 440, 486, 666, 912
FokI GGATG 6 cut(s) 11, 521, 568, 590, 954, 1289
FriOI GRGCYC 3 cut(s) 960, 1002, 1407
Fsp4HI GCNGC 6 cut(s) 252, 437, 440, 486, 666, 912
FspBI CTAG 5 cut(s) 143, 212, 771, 896, 1367
GlaI GCGC 3 cut(s) 374, 695, 1322
GluI GCNGC 6 cut(s) 252, 437, 440, 486, 666, 912
GsuI CTGGAG 2 cut(s) 752, 1216
HaeII RGCGCY 2 cut(s) 376, 697
HaeIII GGCC 7 cut(s) 105, 179, 298, 347, 436, 789, 929
HapII CCGG 4 cut(s) 102, 295, 1282, 1334
HhaI GCGC 3 cut(s) 375, 696, 1323
Hin1I GRCGYC 1 cut(s) 373
Hin6I GCGC 3 cut(s) 373, 694, 1321
HinP1I GCGC 3 cut(s) 373, 694, 1321
HincII GTYRAC 1 cut(s) 822
HindII GTYRAC 1 cut(s) 822
HinfI GANTC 5 cut(s) 4, 501, 985, 1037, 1127
HpaI GTTAAC 1 cut(s) 822
HpaII CCGG 4 cut(s) 102, 295, 1282, 1334
HphI GGTGA 1 cut(s) 1087
Hpy166II GTNNAC 5 cut(s) 805, 822, 859, 1189, 1387
Hpy188I TCNGA 6 cut(s) 316, 646, 1042, 1091, 1228, 1444
Hpy188III TCNNGA 9 cut(s) 275, 622, 866, 961, 979, 1195, 1250, 1261, 1427
Hpy8I GTNNAC 5 cut(s) 805, 822, 859, 1189, 1387
HpyAV CCTTC 4 cut(s) 18, 488, 666, 1072
HpyCH4III ACNGT 7 cut(s) 362, 834, 1110, 1329, 1360, 1464, 1502
HpyCH4IV ACGT 3 cut(s) 548, 807, 1496
HpyCH4V TGCA 7 cut(s) 393, 488, 991, 1106, 1342, 1387, 1487
HpyF10VI GCNNNNNNNGC 5 cut(s) 339, 394, 964, 997, 1489
HpyF3I CTNAG 1 cut(s) 313
HpySE526I ACGT 3 cut(s) 548, 807, 1496
Hsp92I GRCGYC 1 cut(s) 373
HspAI GCGC 3 cut(s) 373, 694, 1321
KasI GGCGCC 1 cut(s) 372
KpnI GGTACC 1 cut(s) 1424
KroI GCCGGC 1 cut(s) 294
KroNI GCCGGC 1 cut(s) 296
KspAI GTTAAC 1 cut(s) 822
Kzo9I GATC 7 cut(s) 717, 721, 868, 903, 975, 1179, 1210
LguI GCTCTTC 1 cut(s) 990
LmnI GCTCC 5 cut(s) 945, 1005, 1197, 1402, 1410
Lsp1109I GCAGC 2 cut(s) 426, 472
LweI GCATC 1 cut(s) 976
MaeI CTAG 5 cut(s) 143, 212, 771, 896, 1367
MaeII ACGT 3 cut(s) 548, 807, 1496
MaeIII GTNAC 3 cut(s) 54, 111, 1110
MalI GATC 7 cut(s) 719, 723, 870, 905, 977, 1181, 1212
MboI GATC 7 cut(s) 717, 721, 868, 903, 975, 1179, 1210
MboII GAAGA 7 cut(s) 397, 490, 748, 994, 1007, 1046, 1218
MfeI CAATTG 1 cut(s) 173
MflI RGATCY 1 cut(s) 1210
MhlI GDGCHC 4 cut(s) 960, 1002, 1389, 1407
MlsI TGGCCA 1 cut(s) 179
MluCI AATT 4 cut(s) 173, 283, 1241, 1343
MluNI TGGCCA 1 cut(s) 179
Mly113I GGCGCC 1 cut(s) 373
MlyI GAGTC 2 cut(s) 13, 510
MmeI TCCRAC 1 cut(s) 193
Mox20I TGGCCA 1 cut(s) 179
MroNI GCCGGC 1 cut(s) 294
MscI TGGCCA 1 cut(s) 179
MseI TTAA 3 cut(s) 698, 821, 1395
Msp20I TGGCCA 1 cut(s) 179
MspA1I CMGCKG 2 cut(s) 439, 1381
MspI CCGG 4 cut(s) 102, 295, 1282, 1334
MspR9I CCNGG 4 cut(s) 102, 731, 1283, 1335
MunI CAATTG 1 cut(s) 173
MvaI CCWGG 1 cut(s) 731
MvnI CGCG 1 cut(s) 1177
MwoI GCNNNNNNNGC 5 cut(s) 339, 394, 964, 997, 1489
NaeI GCCGGC 1 cut(s) 296
NarI GGCGCC 1 cut(s) 373
NciI CCSGG 3 cut(s) 102, 1283, 1335
NdeI CATATG 2 cut(s) 138, 378
NdeII GATC 7 cut(s) 717, 721, 868, 903, 975, 1179, 1210
NgoMIV GCCGGC 1 cut(s) 294
NlaIV GGNNCC 4 cut(s) 364, 374, 947, 1422
NmeAIII GCCGAG 2 cut(s) 887, 979
NmuCI GTSAC 2 cut(s) 54, 111
NspI RCATGY 2 cut(s) 48, 1441
PagI TCATGA 3 cut(s) 274, 978, 1260
PciI ACATGT 1 cut(s) 1437
PciSI GCTCTTC 1 cut(s) 990
PcsI WCGNNNNNNNCGW 2 cut(s) 830, 932
PdiI GCCGGC 1 cut(s) 296
PfeI GAWTC 3 cut(s) 985, 1037, 1127
PflFI GACNNNGTC 1 cut(s) 1329
PflMI CCANNNNNTGG 2 cut(s) 175, 1009
PfoI TCCNGGA 1 cut(s) 729
PkrI GCNGC 6 cut(s) 253, 438, 441, 487, 667, 913
Ple19I CGATCG 1 cut(s) 720
PleI GAGTC 2 cut(s) 12, 509
PluTI GGCGCC 1 cut(s) 376
PpsI GAGTC 2 cut(s) 12, 509
PscI ACATGT 1 cut(s) 1437
Psp124BI GAGCTC 3 cut(s) 960, 1002, 1407
Psp6I CCWGG 1 cut(s) 729
PspGI CCWGG 1 cut(s) 729
PspN4I GGNNCC 4 cut(s) 364, 374, 947, 1422
PspPI GGNCC 5 cut(s) 104, 297, 362, 1021, 1224
PstI CTGCAG 1 cut(s) 490
PsuI RGATCY 1 cut(s) 1210
PsyI GACNNNGTC 1 cut(s) 1329
PvuI CGATCG 1 cut(s) 720
PvuII CAGCTG 1 cut(s) 1381
RsaI GTAC 5 cut(s) 320, 359, 858, 1422, 1499
RsaNI GTAC 5 cut(s) 319, 358, 857, 1421, 1498
SacI GAGCTC 3 cut(s) 960, 1002, 1407
SapI GCTCTTC 1 cut(s) 990
SaqAI TTAA 3 cut(s) 698, 821, 1395
SatI GCNGC 6 cut(s) 252, 437, 440, 486, 666, 912
Sau3AI GATC 7 cut(s) 717, 721, 868, 903, 975, 1179, 1210
Sau96I GGNCC 5 cut(s) 104, 297, 362, 1021, 1224
SchI GAGTC 2 cut(s) 13, 510
ScrFI CCNGG 4 cut(s) 102, 731, 1283, 1335
SduI GDGCHC 4 cut(s) 960, 1002, 1389, 1407
SfaNI GCATC 1 cut(s) 976
SfcI CTRYAG 1 cut(s) 486
SfoI GGCGCC 1 cut(s) 374
SinI GGWCC 3 cut(s) 362, 1021, 1224
SmlI CTYRAG 3 cut(s) 961, 1063, 1425
SmoI CTYRAG 3 cut(s) 961, 1063, 1425
Sse9I AATT 4 cut(s) 173, 283, 1241, 1343
SsiI CCGC 5 cut(s) 252, 437, 666, 911, 1177
SspDI GGCGCC 1 cut(s) 372
SspMI CTAG 5 cut(s) 143, 212, 771, 896, 1367
SstI GAGCTC 3 cut(s) 960, 1002, 1407
StyD4I CCNGG 4 cut(s) 100, 729, 1281, 1333
StyI CCWWGG 1 cut(s) 971
TaaI ACNGT 7 cut(s) 362, 834, 1110, 1329, 1360, 1464, 1502
TaiI ACGT 3 cut(s) 551, 810, 1499
TaqI TCGA 6 cut(s) 160, 720, 871, 935, 1134, 1149
TaqII GACCGA 2 cut(s) 99, 1038
TasI AATT 4 cut(s) 173, 283, 1241, 1343
TatI WGTACW 1 cut(s) 856
TauI GCSGC 4 cut(s) 254, 439, 668, 914
TfiI GAWTC 3 cut(s) 985, 1037, 1127
Tru1I TTAA 3 cut(s) 698, 821, 1395
Tru9I TTAA 3 cut(s) 698, 821, 1395
TscAI CASTG 4 cut(s) 120, 675, 1394, 1467
TseFI GTSAC 2 cut(s) 54, 111
TseI GCWGC 2 cut(s) 439, 485
Tsp45I GTSAC 2 cut(s) 54, 111
TspDTI ATGAA 7 cut(s) 389, 548, 768, 995, 1140, 1249, 1277
TspRI CASTG 4 cut(s) 120, 675, 1394, 1467
Tth111I GACNNNGTC 1 cut(s) 1329
Van91I CCANNNNNTGG 2 cut(s) 175, 1009
VneI GTGCAC 1 cut(s) 1385
VpaK11BI GGWCC 3 cut(s) 362, 1021, 1224
XapI RAATTY 1 cut(s) 1241
XceI RCATGY 2 cut(s) 48, 1441
XcmI CCANNNNNNNNNTGG 1 cut(s) 1010
XmiI GTMKAC 1 cut(s) 804
XspI CTAG 5 cut(s) 143, 212, 771, 896, 1367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.