RchiOBHm_Chr7g0236971

pectinesterase pectinesterase inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000522
Physical Location & Seq
Reverse (-)
61784457 .. 61786282
1826 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21236

Sequence Viewer

Length: 1692 bp
ATGGCTTCTAAGCTCTTCAATCCTCTTGAAACTTCATCACTATCACTATTCCTCATCATTTTCACCTTGCTATTATCTCAATCTTTAGCTGCAGATGTTCCGCCCGGCACTTCTGTTCCGCCCGAAACCATATGCAAGTCCACTCCACACCCTTCTGTTTGCATTTCCGTCCTCCCTCACAAAAATGCCAATGTCTATGACTTTGGCCGCTTTTCTGTCCAGCACTCATTCGTCCAATCCCAAAAGCTTCTGGATTTGATCAACAAATATCTTCAAGGCGGTTCCAGTTTATCACAGACGGAAATCCAAGCCCTCGAGGATTGCAAGTCCCTTGCATTGTTAAACAATGATTTCTTGTCAAACACCCTCGAAACTGTTAACAAAACAAGTGATGTTCTTCCTAGCTCGGATGCTGATGATGTCCAAACCTTGCTCAGTGCTATCTTAACCAACCAGCAGACGTGTTCTGATGGCCTTCAATCTGTGAGTTCAGTCCAAAATGATCTCTTGGTCTCCGTCTCTAATGGTACAGATTTGTACAGTGTCTCATTAGCGTTGGTTACAAAGGGTTGGGTCCCAAAGGATCACAAAAGTAATGGAACACCAAACCAGTCGAAAAAGCATCTCAGTTTCCGGAAGGGGCGATTGTCGCTGAAAATGTCAAGCAAAGCGCGTGCAGTTTACGACTCCGTTATAAATAGAAGAAGACACCTTCTTCAAGCCGGAGATGAAGAAGTTGTGGTGAAGGACATTGTGGTTGTGAGCCAAGATGGAAGTGGAAACTTTACTACCATCACTGATGCTATCAATGCTGCACCCAATAACTCAGTTGCTAGTGATGGTTACTTCTTGGTATATGTCACTGCCGGCGTTTATGAAGAGTATGTATCAATTATATCGAAAAAGAAGTACTTGTTGCTGATCGGAGATGGTATTAATCAGACGATCATCACAGGAAGCAACAGCGTTGGAGGCGGTTCAACCACCTTCAACTCTGCCACTTTAGCTGTGGTAGCACCAGGGTTTATAGCAGTCAACATAACTATTCGAAACACTGCTGGACCAAGCATGGGGCAAGCAGTTGCAGTTCGAAATGGAGCTGACTTGTCAGTTTTCTACAGCTGTAGCTTTGAGGGATACCAAGACACTTTATACACACATTCTATGAGACAATTCTACAGAGAATGTGACATCTACGGAACGGTTGATTTCATATTTGGAAATGCTGCGGTTGTTTTCCAAAACTGTAACATATACCCTCGGCAGCCCCTCAAAGGCCAATCGACTCCCATCACAGCTCAGGGTCGAACGGACCCGAATCAGAACACAGGGACTTCAATCCAGAATTGCACCATTACAGCCTCGGCTGATTTGGCTTCAAGTAACTTCACTGTCAAGACATATCTTGGGAGGCCATGGAAGGAGTATTCGCGGACGGTTTACTTGCAGAATTTCATGGATAGTTTGATTGATCCTGCTGGTTGGCTCGCATGGAGTGGAGATTTTGCACTGAGCACATTGTATTATGCCGAGTACGGTAATAGAGGACCTGGAGCCGACACTAGTAACAGAGTTACTTGGCCAGGTTACCATGTGATAAATGCAAATGATGCTGAAAATTTTACAGTGTCAAACTTCGTGCTGGGGATAGTTGGTTGCCTCAAACAGGAGTGCCTTACACTGGTGGCTTAA

Protein Analysis

563

Amino Acids

60.94

Weight (kDa)

5.79

Isoelectric Point (pI)

33.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 42 - 186 9.4e-25 Plant invertase/pectin methylesterase inhibitor
Pectinesterase PF01095 252 - 548 1.3e-136 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000522)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02810 AT2G47550 AT4G02330
fragaria_vesca FvH4_2g25960 FvH4_2g25960 FvH4_2g25970 FvH4_5g35570 FvH4_5g35580 FvH4_5g35590
malus_domestica MD03G1290900.v1.1 MD03G1291000.v1.1 MD08G1195600.v1.1 MD11G1307400.v1.1 MD11G1307500.v1.1
prunus_persica Prupe.1G529400_v2.0.a1 Prupe.1G529500_v2.0.a1 Prupe.8G263900_v2.0.a1 Prupe.8G264000_v2.0.a1
pyrus_communis pycom08g16800
rosa_chinensis RchiOBHm_Chr6g0294321 RchiOBHm_Chr6g0294331 RchiOBHm_Chr7g0236951 RchiOBHm_Chr7g0236971 RchiOBHm_Chr7g0237041 RchiOBHm_Chr7g0237051
rosa_laevigata RLG00000001034 RLG00000001035 RLG00000001039 RLG00000001043 RLG00000001045 RLG00000011880 RLG00000011881 RLG00000034181
rosa_multiflora Rmu_co8086188.1_g000001 Rmu_co8458485.1_g000001 Rmu_sc0000272.1_g000007 Rmu_sc0000272.1_g000009 Rmu_sc0002131.1_g000030 Rmu_sc0002131.1_g000037 Rmu_sc0005369.1_g000005 Rmu_sc0005369.1_g000008 Rmu_sc0007991.1_g000005 Rmu_sc0007991.1_g000013 Rmu_sc0033563.1_g000001
rosa_roxburghii Rroxscaffold_3G00224540 Rroxscaffold_3G00224600 Rroxscaffold_3G00224650 Rroxscaffold_3G00224660 Rroxscaffold_7G00173470 Rroxscaffold_7G00173480
rosa_rugosa Rorug06G0243400 Rorug06G0243500 Rorug07G0301200 Rorug07G0301500 Rorug07G0301600
rosa_samantha Rh6AG356000 Rh6AG356100 Rh6BG362600 Rh6BG362800 Rh6CG370000 Rh6CG370100 Rh6DG356500 Rh6DG356600 Rh7AG456200 Rh7AG456500 Rh7AG457500 Rh7AG457600 Rh7BG427500 Rh7BG427700 Rh7BG428400 Rh7BG428500 Rh7CG475100 Rh7CG475300 Rh7CG475700 Rh7CG475800 Rh7DG444100 Rh7DG444300 Rh7DG444700 Rh7DG444900
rosa_wichuraiana Rw6G031020 Rw6G031030 Rw7G037870 Rw7G037880 Rw7G037920 Rw7G037940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 695
AbsI CCTCGAGG 1 cut(s) 314
AccII CGCG 2 cut(s) 673, 1432
AccIII TCCGGA 1 cut(s) 633
AciI CCGC 7 cut(s) 101, 119, 208, 279, 975, 1229, 1432
AclWI GGATC 2 cut(s) 591, 1466
AcoI YGGCCR 2 cut(s) 205, 1580
AcsI RAATTY 2 cut(s) 1450, 1618
AfaI GTAC 4 cut(s) 529, 539, 911, 1535
AfiI CCNNNNNNNGG 4 cut(s) 1070, 1274, 1666, 1681
AflIII ACRYGT 1 cut(s) 461
AgsI TTSAA 9 cut(s) 19, 29, 275, 479, 719, 981, 991, 1338, 1380
AhlI ACTAGT 1 cut(s) 1562
AjiI CACGTC 1 cut(s) 462
AjnI CCWGG 3 cut(s) 1018, 1549, 1582
AluBI AGCT 9 cut(s) 13, 89, 247, 405, 1007, 1100, 1122, 1128, 1298
AluI AGCT 9 cut(s) 13, 89, 247, 405, 1007, 1100, 1122, 1128, 1298
Alw21I GWGCWC 1 cut(s) 1517
Alw26I GTCTC 4 cut(s) 517, 523, 550, 1162
AlwI GGATC 2 cut(s) 591, 1466
Ama87I CYCGRG 1 cut(s) 314
Aor13HI TCCGGA 1 cut(s) 633
AoxI GGCC 5 cut(s) 205, 472, 1276, 1412, 1580
ApeKI GCWGC 4 cut(s) 89, 812, 1226, 1264
ApoI RAATTY 2 cut(s) 1450, 1618
AseI ATTAAT 1 cut(s) 936
AspLEI GCGC 1 cut(s) 673
AspS9I GGNCC 4 cut(s) 574, 1061, 1312, 1547
AsuC2I CCSGG 1 cut(s) 105
AsuHPI GGTGA 2 cut(s) 55, 754
AsuII TTCGAA 2 cut(s) 1048, 1090
AvaI CYCGRG 1 cut(s) 314
AvaII GGWCC 4 cut(s) 574, 1061, 1312, 1547
BalI TGGCCA 1 cut(s) 1582
BbsI GAAGAC 1 cut(s) 712
Bbv12I GWGCWC 1 cut(s) 1517
BbvI GCAGC 4 cut(s) 76, 799, 1213, 1276
BccI CCATC 6 cut(s) 464, 764, 800, 833, 923, 1298
BciT130I CCWGG 3 cut(s) 1020, 1551, 1584
BciVI GTATCC 1 cut(s) 1130
BclI TGATCA 1 cut(s) 258
BcnI CCSGG 1 cut(s) 105
BcoDI GTCTC 4 cut(s) 517, 523, 550, 1162
BcuI ACTAGT 1 cut(s) 1562
BfaI CTAG 3 cut(s) 402, 834, 1563
BfmI CTRYAG 4 cut(s) 90, 1117, 1123, 1177
BfuI GTATCC 1 cut(s) 1130
BisI GCNGC 5 cut(s) 90, 208, 813, 1227, 1265
BlsI GCNGC 5 cut(s) 91, 209, 814, 1228, 1266
BmcAI AGTACT 1 cut(s) 911
Bme1390I CCNGG 4 cut(s) 105, 1020, 1551, 1584
Bme18I GGWCC 4 cut(s) 574, 1061, 1312, 1547
BmeT110I CYCGRG 1 cut(s) 314
BmgBI CACGTC 1 cut(s) 462
BmgT120I GGNCC 4 cut(s) 574, 1061, 1312, 1547
BmiI GGNNCC 5 cut(s) 283, 575, 576, 1314, 1555
BmrFI CCNGG 4 cut(s) 105, 1020, 1551, 1584
BmsI GCATC 4 cut(s) 400, 631, 790, 1600
BpiI GAAGAC 1 cut(s) 712
BpmI CTGGAG 1 cut(s) 1572
Bpu10I CCTNAGC 1 cut(s) 1299
Bpu14I TTCGAA 2 cut(s) 1048, 1090
BpuMI CCSGG 1 cut(s) 105
BsaI GGTCTC 1 cut(s) 517
BsaJI CCNNGG 4 cut(s) 1019, 1259, 1362, 1415
BsaWI WCCGGW 1 cut(s) 633
Bsc4I CCNNNNNNNGG 4 cut(s) 1070, 1274, 1666, 1681
Bse118I RCCGGY 1 cut(s) 866
Bse1I ACTGG 3 cut(s) 285, 610, 1686
BseAI TCCGGA 1 cut(s) 633
BseBI CCWGG 3 cut(s) 1020, 1551, 1584
BseDI CCNNGG 4 cut(s) 1019, 1259, 1362, 1415
BseGI GGATG 1 cut(s) 415
BseLI CCNNNNNNNGG 4 cut(s) 1070, 1274, 1666, 1681
BseMII CTCAG 5 cut(s) 448, 640, 840, 1313, 1502
BseNI ACTGG 3 cut(s) 285, 610, 1686
BseXI GCAGC 4 cut(s) 76, 799, 1213, 1276
BseYI CCCAGC 1 cut(s) 1642
BsgI GTGCAG 2 cut(s) 696, 798
Bsh1236I CGCG 2 cut(s) 673, 1432
BshFI GGCC 5 cut(s) 207, 474, 1278, 1414, 1582
BsiHKAI GWGCWC 1 cut(s) 1517
BsiHKCI CYCGRG 1 cut(s) 314
BsiSI CCGG 4 cut(s) 105, 634, 723, 867
BslFI GGGAC 3 cut(s) 313, 560, 1345
BslI CCNNNNNNNGG 4 cut(s) 1070, 1274, 1666, 1681
BsmAI GTCTC 4 cut(s) 517, 523, 550, 1162
BsmBI CGTCTC 1 cut(s) 523
BsmFI GGGAC 3 cut(s) 313, 560, 1345
BsnI GGCC 5 cut(s) 207, 474, 1278, 1414, 1582
Bso31I GGTCTC 1 cut(s) 517
BsoBI CYCGRG 1 cut(s) 314
Bsp119I TTCGAA 2 cut(s) 1048, 1090
Bsp1286I GDGCHC 1 cut(s) 1517
Bsp13I TCCGGA 1 cut(s) 633
Bsp1407I TGTACA 1 cut(s) 537
Bsp143I GATC 6 cut(s) 258, 502, 583, 921, 945, 1471
Bsp19I CCATGG 1 cut(s) 1415
BspACI CCGC 7 cut(s) 101, 119, 208, 279, 975, 1229, 1432
BspANI GGCC 5 cut(s) 207, 474, 1278, 1414, 1582
BspCNI CTCAG 5 cut(s) 447, 639, 839, 1312, 1503
BspEI TCCGGA 1 cut(s) 633
BspFNI CGCG 2 cut(s) 673, 1432
BspLI GGNNCC 5 cut(s) 283, 575, 576, 1314, 1555
BspMAI CTGCAG 1 cut(s) 94
BspPI GGATC 2 cut(s) 591, 1466
BspQI GCTCTTC 1 cut(s) 20
BspT104I TTCGAA 2 cut(s) 1048, 1090
BspTNI GGTCTC 1 cut(s) 517
BsrFI RCCGGY 1 cut(s) 866
BsrGI TGTACA 1 cut(s) 537
BsrI ACTGG 3 cut(s) 285, 610, 1686
BssAI RCCGGY 1 cut(s) 866
BssECI CCNNGG 4 cut(s) 1019, 1259, 1362, 1415
BssMI GATC 6 cut(s) 258, 502, 583, 921, 945, 1471
BssT1I CCWWGG 1 cut(s) 1415
Bst2UI CCWGG 3 cut(s) 1020, 1551, 1584
Bst4CI ACNGT 8 cut(s) 376, 542, 1204, 1247, 1393, 1438, 1538, 1627
Bst6I CTCTTC 2 cut(s) 20, 873
BstAPI GCANNNNNTGC 1 cut(s) 1610
BstAUI TGTACA 1 cut(s) 537
BstBI TTCGAA 2 cut(s) 1048, 1090
BstC8I GCNNGC 4 cut(s) 675, 868, 1077, 1488
BstDEI CTNAG 6 cut(s) 9, 434, 626, 826, 1299, 1511
BstDSI CCRYGG 1 cut(s) 1415
BstEII GGTNACC 1 cut(s) 1586
BstENI CCTNNNNNAGG 1 cut(s) 1664
BstF5I GGATG 1 cut(s) 415
BstFNI CGCG 2 cut(s) 673, 1432
BstHHI GCGC 1 cut(s) 673
BstKTI GATC 6 cut(s) 261, 505, 586, 924, 948, 1474
BstMAI GTCTC 4 cut(s) 517, 523, 550, 1162
BstMBI GATC 6 cut(s) 258, 502, 583, 921, 945, 1471
BstMWI GCNNNNNNNGC 7 cut(s) 649, 809, 972, 1004, 1013, 1373, 1610
BstNI CCWGG 3 cut(s) 1020, 1551, 1584
BstPI GGTNACC 1 cut(s) 1586
BstSCI CCNGG 4 cut(s) 103, 1018, 1549, 1582
BstSFI CTRYAG 4 cut(s) 90, 1117, 1123, 1177
BstUI CGCG 2 cut(s) 673, 1432
BstV1I GCAGC 4 cut(s) 76, 799, 1213, 1276
BstV2I GAAGAC 1 cut(s) 712
BsuI GTATCC 1 cut(s) 1130
BsuRI GGCC 5 cut(s) 207, 474, 1278, 1414, 1582
BtgI CCRYGG 1 cut(s) 1415
BtrI CACGTC 1 cut(s) 462
BtsCI GGATG 1 cut(s) 415
BtsI GCAGTG 2 cut(s) 861, 1053
BtsIMutI CAGTG 9 cut(s) 442, 547, 795, 861, 1053, 1389, 1508, 1632, 1679
Cac8I GCNNGC 4 cut(s) 675, 868, 1077, 1488
CfoI GCGC 1 cut(s) 673
Cfr10I RCCGGY 1 cut(s) 866
Cfr13I GGNCC 4 cut(s) 574, 1061, 1312, 1547
Csp6I GTAC 4 cut(s) 528, 538, 910, 1534
CviAII CATG 5 cut(s) 1069, 1416, 1456, 1491, 1592
CviQI GTAC 4 cut(s) 528, 538, 910, 1534
DdeI CTNAG 6 cut(s) 9, 434, 626, 826, 1299, 1511
DpnI GATC 6 cut(s) 260, 504, 585, 923, 947, 1473
DpnII GATC 6 cut(s) 258, 502, 583, 921, 945, 1471
EaeI YGGCCR 2 cut(s) 205, 1580
Eam1104I CTCTTC 2 cut(s) 20, 873
EarI CTCTTC 2 cut(s) 20, 873
EciI GGCGGA 2 cut(s) 90, 108
Eco130I CCWWGG 1 cut(s) 1415
Eco31I GGTCTC 1 cut(s) 517
Eco47I GGWCC 4 cut(s) 574, 1061, 1312, 1547
Eco88I CYCGRG 1 cut(s) 314
Eco91I GGTNACC 1 cut(s) 1586
EcoNI CCTNNNNNAGG 1 cut(s) 1664
EcoO109I RGGNCCY 2 cut(s) 574, 1547
EcoO65I GGTNACC 1 cut(s) 1586
EcoRII CCWGG 3 cut(s) 1018, 1549, 1582
EcoT14I CCWWGG 1 cut(s) 1415
ErhI CCWWGG 1 cut(s) 1415
Esp3I CGTCTC 1 cut(s) 523
FaeI CATG 5 cut(s) 1072, 1419, 1459, 1494, 1595
FalI AAGNNNNNCTT 2 cut(s) 896, 928
FaqI GGGAC 3 cut(s) 313, 560, 1345
FatI CATG 5 cut(s) 1068, 1415, 1455, 1490, 1591
FauNDI CATATG 1 cut(s) 131
FbaI TGATCA 1 cut(s) 258
Fnu4HI GCNGC 5 cut(s) 90, 208, 813, 1227, 1265
FokI GGATG 1 cut(s) 422
Fsp4HI GCNGC 5 cut(s) 90, 208, 813, 1227, 1265
FspBI CTAG 3 cut(s) 402, 834, 1563
GlaI GCGC 1 cut(s) 672
GluI GCNGC 5 cut(s) 90, 208, 813, 1227, 1265
GsaI CCCAGC 1 cut(s) 1646
GsuI CTGGAG 1 cut(s) 1572
HaeIII GGCC 5 cut(s) 207, 474, 1278, 1414, 1582
HapII CCGG 4 cut(s) 105, 634, 723, 867
HhaI GCGC 1 cut(s) 673
Hin1II CATG 5 cut(s) 1072, 1419, 1459, 1494, 1595
Hin6I GCGC 1 cut(s) 671
HinP1I GCGC 1 cut(s) 671
HincII GTYRAC 2 cut(s) 379, 1036
HindII GTYRAC 2 cut(s) 379, 1036
HindIII AAGCTT 1 cut(s) 245
HinfI GANTC 3 cut(s) 686, 1285, 1318
HpaI GTTAAC 1 cut(s) 379
HpaII CCGG 4 cut(s) 105, 634, 723, 867
HphI GGTGA 2 cut(s) 55, 754
Hpy166II GTNNAC 5 cut(s) 141, 379, 682, 1036, 1441
Hpy188I TCNGA 5 cut(s) 409, 469, 926, 942, 1323
Hpy188III TCNNGA 5 cut(s) 26, 251, 634, 1342, 1396
Hpy8I GTNNAC 5 cut(s) 141, 379, 682, 1036, 1441
HpyAV CCTTC 7 cut(s) 162, 485, 631, 722, 739, 997, 1414
HpyCH4III ACNGT 8 cut(s) 376, 542, 1204, 1247, 1393, 1438, 1538, 1627
HpyCH4IV ACGT 1 cut(s) 461
HpyF10VI GCNNNNNNNGC 7 cut(s) 649, 809, 972, 1004, 1013, 1373, 1610
HpyF3I CTNAG 6 cut(s) 9, 434, 626, 826, 1299, 1511
HpySE526I ACGT 1 cut(s) 461
Hsp92II CATG 5 cut(s) 1072, 1419, 1459, 1494, 1595
HspAI GCGC 1 cut(s) 671
KflI GGGWCCC 1 cut(s) 574
Kpn2I TCCGGA 1 cut(s) 633
KroI GCCGGC 1 cut(s) 866
KroNI GCCGGC 1 cut(s) 868
Ksp22I TGATCA 1 cut(s) 258
KspAI GTTAAC 1 cut(s) 379
Kzo9I GATC 6 cut(s) 258, 502, 583, 921, 945, 1471
LguI GCTCTTC 1 cut(s) 20
LmnI GCTCC 2 cut(s) 1097, 1553
Lsp1109I GCAGC 4 cut(s) 76, 799, 1213, 1276
LweI GCATC 4 cut(s) 400, 631, 790, 1600
MaeI CTAG 3 cut(s) 402, 834, 1563
MaeII ACGT 1 cut(s) 461
MaeIII GTNAC 9 cut(s) 559, 842, 859, 1187, 1247, 1382, 1565, 1573, 1586
MalI GATC 6 cut(s) 260, 504, 585, 923, 947, 1473
MboI GATC 6 cut(s) 258, 502, 583, 921, 945, 1471
MboII GAAGA 8 cut(s) 7, 263, 389, 707, 714, 717, 743, 890
MhlI GDGCHC 1 cut(s) 1517
MlsI TGGCCA 1 cut(s) 1582
MluCI AATT 5 cut(s) 891, 1172, 1345, 1450, 1618
MluNI TGGCCA 1 cut(s) 1582
MlyI GAGTC 2 cut(s) 680, 1279
MmeI TCCRAC 1 cut(s) 949
Mox20I TGGCCA 1 cut(s) 1582
MroI TCCGGA 1 cut(s) 633
MroNI GCCGGC 1 cut(s) 866
MscI TGGCCA 1 cut(s) 1582
MseI TTAA 5 cut(s) 341, 378, 446, 936, 1690
MslI CAYNNNNRTG 1 cut(s) 183
Msp20I TGGCCA 1 cut(s) 1582
MspA1I CMGCKG 1 cut(s) 1122
MspI CCGG 4 cut(s) 105, 634, 723, 867
MspR9I CCNGG 4 cut(s) 105, 1020, 1551, 1584
MvaI CCWGG 3 cut(s) 1020, 1551, 1584
MvnI CGCG 2 cut(s) 673, 1432
MwoI GCNNNNNNNGC 7 cut(s) 649, 809, 972, 1004, 1013, 1373, 1610
NaeI GCCGGC 1 cut(s) 868
NciI CCSGG 1 cut(s) 105
NcoI CCATGG 1 cut(s) 1415
NdeI CATATG 1 cut(s) 131
NdeII GATC 6 cut(s) 258, 502, 583, 921, 945, 1471
NgoMIV GCCGGC 1 cut(s) 866
NlaIII CATG 5 cut(s) 1072, 1419, 1459, 1494, 1595
NlaIV GGNNCC 5 cut(s) 283, 575, 576, 1314, 1555
NmeAIII GCCGAG 3 cut(s) 1240, 1343, 1555
NmuCI GTSAC 2 cut(s) 859, 1187
NspV TTCGAA 2 cut(s) 1048, 1090
PaeR7I CTCGAG 1 cut(s) 314
PciSI GCTCTTC 1 cut(s) 20
PdiI GCCGGC 1 cut(s) 868
PfeI GAWTC 1 cut(s) 1318
PkrI GCNGC 5 cut(s) 91, 209, 814, 1228, 1266
PleI GAGTC 2 cut(s) 680, 1279
PpsI GAGTC 2 cut(s) 680, 1279
PpuMI RGGWCCY 2 cut(s) 574, 1547
PshBI ATTAAT 1 cut(s) 936
PsiI TTATAA 1 cut(s) 695
Psp5II RGGWCCY 2 cut(s) 574, 1547
Psp6I CCWGG 3 cut(s) 1018, 1549, 1582
PspEI GGTNACC 1 cut(s) 1586
PspFI CCCAGC 1 cut(s) 1642
PspGI CCWGG 3 cut(s) 1018, 1549, 1582
PspN4I GGNNCC 5 cut(s) 283, 575, 576, 1314, 1555
PspPI GGNCC 4 cut(s) 574, 1061, 1312, 1547
PspPPI RGGWCCY 2 cut(s) 574, 1547
PspXI VCTCGAGB 1 cut(s) 314
PstI CTGCAG 1 cut(s) 94
PvuII CAGCTG 1 cut(s) 1122
RsaI GTAC 4 cut(s) 529, 539, 911, 1535
RsaNI GTAC 4 cut(s) 528, 538, 910, 1534
RseI CAYNNNNRTG 1 cut(s) 183
SapI GCTCTTC 1 cut(s) 20
SaqAI TTAA 5 cut(s) 341, 378, 446, 936, 1690
SatI GCNGC 5 cut(s) 90, 208, 813, 1227, 1265
Sau3AI GATC 6 cut(s) 258, 502, 583, 921, 945, 1471
Sau96I GGNCC 4 cut(s) 574, 1061, 1312, 1547
ScaI AGTACT 1 cut(s) 911
SchI GAGTC 2 cut(s) 680, 1279
ScrFI CCNGG 4 cut(s) 105, 1020, 1551, 1584
SduI GDGCHC 1 cut(s) 1517
SfaNI GCATC 4 cut(s) 400, 631, 790, 1600
SfcI CTRYAG 4 cut(s) 90, 1117, 1123, 1177
Sfr274I CTCGAG 1 cut(s) 314
SfuI TTCGAA 2 cut(s) 1048, 1090
SinI GGWCC 4 cut(s) 574, 1061, 1312, 1547
SlaI CTCGAG 1 cut(s) 314
SmiMI CAYNNNNRTG 1 cut(s) 183
SmlI CTYRAG 1 cut(s) 314
SmoI CTYRAG 1 cut(s) 314
SpeI ACTAGT 1 cut(s) 1562
Sse9I AATT 5 cut(s) 891, 1172, 1345, 1450, 1618
SsiI CCGC 7 cut(s) 101, 119, 208, 279, 975, 1229, 1432
SspMI CTAG 3 cut(s) 402, 834, 1563
StyD4I CCNGG 4 cut(s) 103, 1018, 1549, 1582
StyI CCWWGG 1 cut(s) 1415
TaaI ACNGT 8 cut(s) 376, 542, 1204, 1247, 1393, 1438, 1538, 1627
TaiI ACGT 1 cut(s) 464
TaqI TCGA 8 cut(s) 315, 369, 614, 899, 1048, 1090, 1283, 1306
TasI AATT 5 cut(s) 891, 1172, 1345, 1450, 1618
TatI WGTACW 2 cut(s) 537, 909
TauI GCSGC 1 cut(s) 210
TfiI GAWTC 1 cut(s) 1318
Tru1I TTAA 5 cut(s) 341, 378, 446, 936, 1690
Tru9I TTAA 5 cut(s) 341, 378, 446, 936, 1690
TscAI CASTG 9 cut(s) 442, 547, 802, 868, 1060, 1396, 1515, 1632, 1686
TseFI GTSAC 2 cut(s) 859, 1187
TseI GCWGC 4 cut(s) 89, 812, 1226, 1264
Tsp45I GTSAC 2 cut(s) 859, 1187
TspDTI ATGAA 5 cut(s) 24, 744, 891, 1201, 1444
TspGWI ACGGA 6 cut(s) 157, 314, 505, 679, 1212, 1325
TspRI CASTG 9 cut(s) 442, 547, 802, 868, 1060, 1396, 1515, 1632, 1686
VpaK11BI GGWCC 4 cut(s) 574, 1061, 1312, 1547
VspI ATTAAT 1 cut(s) 936
XagI CCTNNNNNAGG 1 cut(s) 1664
XapI RAATTY 2 cut(s) 1450, 1618
XcmI CCANNNNNNNNNTGG 2 cut(s) 773, 1006
XhoI CTCGAG 1 cut(s) 314
XspI CTAG 3 cut(s) 402, 834, 1563
ZrmI AGTACT 1 cut(s) 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.