Rw7G037920

pectinesterase pectinesterase inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000522
Physical Location & Seq
Reverse (-)
57548239 .. 57550065
1827 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G037920.1

Sequence Viewer

Length: 1638 bp
ATGGCTTCTAAGCTCTTCAATCCTCTTGTAACCTCATCATTTTCACTATTCCTCATCATTTTCGCTTTGTTCATATCTCAAACTTCAGCTGCAGATGTTCCTCTCAGCATTTCTGTTCCGCCCGAAACCATATGCAAGTCCACTCCACACCCTTCTGTTTGCATTTCCGTCCTCCCTCACAAAAATGCCACTGTCTATGACTTCGGCCGCTTGTCAGTCCAACACTCATTCGTCCAATCCCAAAAGCTTCTGGATTTGATCAACAAATATGTTCAAGGTGGTTCCAGTTTATCACAGCTGGAAATCCAAGCCCTCGAGGATTGCAAGTCGCTTGCATTGTTAAACATTGATTTCTTCTCAAACACTCTTGAAACTGTCAACAAAACAAGCGGTGTTCTTCCTAGCTCCGATGCTGATGATGTCCAAACCCTGCTTAGTGCCATCTTAACCAACCAGCAGACGTGTTCTGATGGCCTTCAATCTGTGAGTTCAGTCCAAAATGATCTCTCAGTATCCGTTTCTAATGGTACAAATTTGTACAGTGTCTCATTAGCGTTGGTTACAAAGGGTTGGGTCCCAAAGGATCACAAAAATAATGGAACACCAAACCAGTCGAAAAAGCATCTCAGTTTCCGAAAGGGGCGATTGTCAATGAAAATGTCAAGCGAAGCGCGTGCAGTTTACGACTCGGTTATAAATCGAAGAAGGCACCTTCTTCAAGCCAGAGATGAAGAAATTTTGGTGAAGGACATTGTGGTTGTGAGCCAAGATGGAAGTGGAAACTTCACAACCATCAATGATGCTATCAATGCTGCACCCAATAACTCTGTTGCTAGTGATGGCTACTTCTTGGTATATGTCACTGCCGGCGTTTATAAAGAGTACGTATCAATTATATCGAAAAAGAAGTACTTGTTGCTGATCGGAGACGGTATTAATCAGACGATCATCACAGGAAACAACAGCGTTGGAGGCGGTTCAACCACCTTCAACTCTGCCACTTTAGCTGTGGTAGCACCAGGGTTTATAGCAGTCAACATAACTGTTCGAAACACTGCTGGACCAAGCATGGGGCAAGCAGTTGCAGTTCGAAATGGAGCCGACTTGTCAGTTTTCTACAGCTGTAGCTTTGAGGGATACCAAGACACCTTATACCCACATTCTATGAGACAATTCTACAGAGAATGTGACATATACGGAACGGTTGATTTCATATTCGGAAATGCTGCAGTTGTTTTCCAAAACTGCAACATATACCCTCGCCAGCCCAGCAAAGGCCAATCGAATACCATCACAGCTCAGGGTCGAACGGACCCGAATCAGAACACAGGGACTTCAATCCAGAATTGCACCATTACAGCCGCGGCTGATTTGGCTTCAAGTAACTTCACTGTCAAGACATATCTTGGGAGGCCATGGAAGGAGTATTCGAGGACGTGGAGATTTTGCACTGAGCACATTGTATTTGCTGAGTACAATAATACAGGACCTGGATCAAACACTAGCAACAGAGTTACATGGCCTGGTTACCATGTGATCGGTGCAACTGATGCTGCCAACTTTACAGTCTCCAACTTCATATTGGGGGATAATTGGCTGCCTCAGACAGGGGTGCCTTACACTGGTGGCTTAATATGA

Protein Analysis

545

Amino Acids

59.09

Weight (kDa)

7.56

Isoelectric Point (pI)

33.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 42 - 186 1.5e-25 Plant invertase/pectin methylesterase inhibitor
Pectinesterase PF01095 252 - 479 4.9e-103 Pectinesterase
Pectinesterase PF01095 484 - 530 1.9e-11 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000522)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02810 AT2G47550 AT4G02330
fragaria_vesca FvH4_2g25960 FvH4_2g25960 FvH4_2g25970 FvH4_5g35570 FvH4_5g35580 FvH4_5g35590
malus_domestica MD03G1290900.v1.1 MD03G1291000.v1.1 MD08G1195600.v1.1 MD11G1307400.v1.1 MD11G1307500.v1.1
prunus_persica Prupe.1G529400_v2.0.a1 Prupe.1G529500_v2.0.a1 Prupe.8G263900_v2.0.a1 Prupe.8G264000_v2.0.a1
pyrus_communis pycom08g16800
rosa_chinensis RchiOBHm_Chr6g0294321 RchiOBHm_Chr6g0294331 RchiOBHm_Chr7g0236951 RchiOBHm_Chr7g0236971 RchiOBHm_Chr7g0237041 RchiOBHm_Chr7g0237051
rosa_laevigata RLG00000001034 RLG00000001035 RLG00000001039 RLG00000001043 RLG00000001045 RLG00000011880 RLG00000011881 RLG00000034181
rosa_multiflora Rmu_co8086188.1_g000001 Rmu_co8458485.1_g000001 Rmu_sc0000272.1_g000007 Rmu_sc0000272.1_g000009 Rmu_sc0002131.1_g000030 Rmu_sc0002131.1_g000037 Rmu_sc0005369.1_g000005 Rmu_sc0005369.1_g000008 Rmu_sc0007991.1_g000005 Rmu_sc0007991.1_g000013 Rmu_sc0033563.1_g000001
rosa_roxburghii Rroxscaffold_3G00224540 Rroxscaffold_3G00224600 Rroxscaffold_3G00224650 Rroxscaffold_3G00224660 Rroxscaffold_7G00173470 Rroxscaffold_7G00173480
rosa_rugosa Rorug06G0243400 Rorug06G0243500 Rorug07G0301200 Rorug07G0301500 Rorug07G0301600
rosa_samantha Rh6AG356000 Rh6AG356100 Rh6BG362600 Rh6BG362800 Rh6CG370000 Rh6CG370100 Rh6DG356500 Rh6DG356600 Rh7AG456200 Rh7AG456500 Rh7AG457500 Rh7AG457600 Rh7BG427500 Rh7BG427700 Rh7BG428400 Rh7BG428500 Rh7CG475100 Rh7CG475300 Rh7CG475700 Rh7CG475800 Rh7DG444100 Rh7DG444300 Rh7DG444700 Rh7DG444900
rosa_wichuraiana Rw6G031020 Rw6G031030 Rw7G037870 Rw7G037880 Rw7G037920 Rw7G037940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 695, 876
AbsI CCTCGAGG 1 cut(s) 314
AccB1I GGYRCC 2 cut(s) 708, 1612
AccII CGCG 2 cut(s) 673, 1364
AciI CCGC 6 cut(s) 119, 208, 390, 975, 1362, 1364
AclWI GGATC 2 cut(s) 591, 1501
AcoI YGGCCR 1 cut(s) 205
AcsI RAATTY 2 cut(s) 532, 735
AcuI CTGAAG 1 cut(s) 69
AfaI GTAC 5 cut(s) 529, 539, 884, 911, 1475
AfiI CCNNNNNNNGG 4 cut(s) 1070, 1274, 1607, 1622
AflIII ACRYGT 1 cut(s) 461
AgsI TTSAA 9 cut(s) 19, 275, 371, 479, 719, 981, 991, 1338, 1380
AjiI CACGTC 2 cut(s) 462, 1437
AjnI CCWGG 3 cut(s) 1018, 1489, 1522
AluBI AGCT 9 cut(s) 13, 89, 247, 298, 405, 1007, 1122, 1128, 1298
AluI AGCT 9 cut(s) 13, 89, 247, 298, 405, 1007, 1122, 1128, 1298
Alw21I GWGCWC 1 cut(s) 1458
Alw26I GTCTC 4 cut(s) 550, 921, 1162, 1573
AlwI GGATC 2 cut(s) 591, 1501
AlwNI CAGNNNCTG 1 cut(s) 1490
Ama87I CYCGRG 1 cut(s) 314
AoxI GGCC 5 cut(s) 205, 472, 1276, 1412, 1520
ApeKI GCWGC 5 cut(s) 89, 812, 1226, 1553, 1597
ApoI RAATTY 2 cut(s) 532, 735
AseI ATTAAT 1 cut(s) 936
AspLEI GCGC 1 cut(s) 673
AspS9I GGNCC 4 cut(s) 574, 1061, 1312, 1487
AsuHPI GGTGA 1 cut(s) 754
AsuII TTCGAA 2 cut(s) 1048, 1090
AvaI CYCGRG 1 cut(s) 314
AvaII GGWCC 4 cut(s) 574, 1061, 1312, 1487
BanI GGYRCC 2 cut(s) 708, 1612
Bbv12I GWGCWC 1 cut(s) 1458
BbvI GCAGC 5 cut(s) 76, 799, 1213, 1540, 1584
BccI CCATC 6 cut(s) 449, 464, 764, 800, 833, 1298
BcgI CGANNNNNNTGC 2 cut(s) 656, 690
BciT130I CCWGG 3 cut(s) 1020, 1491, 1524
BciVI GTATCC 2 cut(s) 523, 1130
BclI TGATCA 1 cut(s) 258
BcoDI GTCTC 4 cut(s) 550, 921, 1162, 1573
BfaI CTAG 3 cut(s) 402, 834, 1503
BfmI CTRYAG 5 cut(s) 90, 1117, 1123, 1177, 1227
BfuI GTATCC 2 cut(s) 523, 1130
BisI GCNGC 8 cut(s) 90, 208, 813, 1227, 1362, 1365, 1554, 1598
BlsI GCNGC 8 cut(s) 91, 209, 814, 1228, 1363, 1366, 1555, 1599
BmcAI AGTACT 1 cut(s) 911
Bme1390I CCNGG 3 cut(s) 1020, 1491, 1524
Bme18I GGWCC 4 cut(s) 574, 1061, 1312, 1487
BmeT110I CYCGRG 1 cut(s) 314
BmgBI CACGTC 2 cut(s) 462, 1437
BmgT120I GGNCC 4 cut(s) 574, 1061, 1312, 1487
BmiI GGNNCC 7 cut(s) 283, 575, 576, 710, 1099, 1314, 1614
BmrFI CCNGG 3 cut(s) 1020, 1491, 1524
BmsI GCATC 4 cut(s) 400, 631, 790, 1540
Bpu10I CCTNAGC 1 cut(s) 1299
Bpu14I TTCGAA 2 cut(s) 1048, 1090
BsaAI YACGTR 1 cut(s) 886
BsaJI CCNNGG 3 cut(s) 1019, 1362, 1415
Bsc4I CCNNNNNNNGG 4 cut(s) 1070, 1274, 1607, 1622
Bse118I RCCGGY 1 cut(s) 866
Bse1I ACTGG 3 cut(s) 285, 610, 1627
BseBI CCWGG 3 cut(s) 1020, 1491, 1524
BseDI CCNNGG 3 cut(s) 1019, 1362, 1415
BseLI CCNNNNNNNGG 4 cut(s) 1070, 1274, 1607, 1622
BseMII CTCAG 7 cut(s) 118, 522, 640, 1313, 1443, 1461, 1616
BseNI ACTGG 3 cut(s) 285, 610, 1627
BseX3I CGGCCG 1 cut(s) 205
BseXI GCAGC 5 cut(s) 76, 799, 1213, 1540, 1584
BseYI CCCAGC 1 cut(s) 1268
BsgI GTGCAG 2 cut(s) 696, 798
Bsh1236I CGCG 2 cut(s) 673, 1364
Bsh1285I CGRYCG 1 cut(s) 208
BshFI GGCC 5 cut(s) 207, 474, 1278, 1414, 1522
BshNI GGYRCC 2 cut(s) 708, 1612
BsiEI CGRYCG 1 cut(s) 208
BsiHKAI GWGCWC 1 cut(s) 1458
BsiHKCI CYCGRG 1 cut(s) 314
BsiSI CCGG 1 cut(s) 867
BslFI GGGAC 2 cut(s) 560, 1345
BslI CCNNNNNNNGG 4 cut(s) 1070, 1274, 1607, 1622
BsmAI GTCTC 4 cut(s) 550, 921, 1162, 1573
BsmBI CGTCTC 1 cut(s) 921
BsmFI GGGAC 2 cut(s) 560, 1345
BsnI GGCC 5 cut(s) 207, 474, 1278, 1414, 1522
BsoBI CYCGRG 1 cut(s) 314
Bsp119I TTCGAA 2 cut(s) 1048, 1090
Bsp1286I GDGCHC 1 cut(s) 1458
Bsp1407I TGTACA 1 cut(s) 537
Bsp143I GATC 7 cut(s) 258, 502, 583, 921, 945, 1493, 1536
Bsp19I CCATGG 1 cut(s) 1415
BspACI CCGC 6 cut(s) 119, 208, 390, 975, 1362, 1364
BspANI GGCC 5 cut(s) 207, 474, 1278, 1414, 1522
BspCNI CTCAG 7 cut(s) 117, 521, 639, 1312, 1444, 1462, 1615
BspFNI CGCG 2 cut(s) 673, 1364
BspLI GGNNCC 7 cut(s) 283, 575, 576, 710, 1099, 1314, 1614
BspMAI CTGCAG 2 cut(s) 94, 1231
BspPI GGATC 2 cut(s) 591, 1501
BspQI GCTCTTC 1 cut(s) 20
BspT104I TTCGAA 2 cut(s) 1048, 1090
BspT107I GGYRCC 2 cut(s) 708, 1612
BsrFI RCCGGY 1 cut(s) 866
BsrGI TGTACA 1 cut(s) 537
BsrI ACTGG 3 cut(s) 285, 610, 1627
BssAI RCCGGY 1 cut(s) 866
BssECI CCNNGG 3 cut(s) 1019, 1362, 1415
BssMI GATC 7 cut(s) 258, 502, 583, 921, 945, 1493, 1536
BssT1I CCWWGG 1 cut(s) 1415
Bst2UI CCWGG 3 cut(s) 1020, 1491, 1524
Bst4CI ACNGT 8 cut(s) 193, 376, 542, 932, 1045, 1204, 1393, 1567
Bst6I CTCTTC 1 cut(s) 20
BstAPI GCANNNNNTGC 1 cut(s) 1550
BstAUI TGTACA 1 cut(s) 537
BstBAI YACGTR 1 cut(s) 886
BstBI TTCGAA 2 cut(s) 1048, 1090
BstC8I GCNNGC 5 cut(s) 333, 675, 868, 1077, 1265
BstDEI CTNAG 9 cut(s) 9, 104, 434, 508, 626, 1299, 1452, 1470, 1602
BstDSI CCRYGG 2 cut(s) 1362, 1415
BstEII GGTNACC 1 cut(s) 1526
BstENI CCTNNNNNAGG 1 cut(s) 1605
BstFNI CGCG 2 cut(s) 673, 1364
BstHHI GCGC 1 cut(s) 673
BstKTI GATC 7 cut(s) 261, 505, 586, 924, 948, 1496, 1539
BstMAI GTCTC 4 cut(s) 550, 921, 1162, 1573
BstMBI GATC 7 cut(s) 258, 502, 583, 921, 945, 1493, 1536
BstMCI CGRYCG 1 cut(s) 208
BstMWI GCNNNNNNNGC 7 cut(s) 809, 972, 1004, 1013, 1269, 1373, 1550
BstNI CCWGG 3 cut(s) 1020, 1491, 1524
BstPI GGTNACC 1 cut(s) 1526
BstSCI CCNGG 3 cut(s) 1018, 1489, 1522
BstSFI CTRYAG 5 cut(s) 90, 1117, 1123, 1177, 1227
BstSNI TACGTA 1 cut(s) 886
BstUI CGCG 2 cut(s) 673, 1364
BstV1I GCAGC 5 cut(s) 76, 799, 1213, 1540, 1584
BstZI CGGCCG 1 cut(s) 205
BsuI GTATCC 2 cut(s) 523, 1130
BsuRI GGCC 5 cut(s) 207, 474, 1278, 1414, 1522
BtgI CCRYGG 2 cut(s) 1362, 1415
BtrI CACGTC 2 cut(s) 462, 1437
BtsI GCAGTG 2 cut(s) 861, 1053
BtsIMutI CAGTG 7 cut(s) 189, 547, 861, 1053, 1389, 1449, 1620
Cac8I GCNNGC 5 cut(s) 333, 675, 868, 1077, 1265
CaiI CAGNNNCTG 1 cut(s) 1490
CfoI GCGC 1 cut(s) 673
Cfr10I RCCGGY 1 cut(s) 866
Cfr13I GGNCC 4 cut(s) 574, 1061, 1312, 1487
Cfr42I CCGCGG 1 cut(s) 1365
Csp6I GTAC 5 cut(s) 528, 538, 883, 910, 1474
CviAII CATG 4 cut(s) 1069, 1416, 1518, 1532
CviQI GTAC 5 cut(s) 528, 538, 883, 910, 1474
DdeI CTNAG 9 cut(s) 9, 104, 434, 508, 626, 1299, 1452, 1470, 1602
DpnI GATC 7 cut(s) 260, 504, 585, 923, 947, 1495, 1538
DpnII GATC 7 cut(s) 258, 502, 583, 921, 945, 1493, 1536
EaeI YGGCCR 1 cut(s) 205
EagI CGGCCG 1 cut(s) 205
Eam1104I CTCTTC 1 cut(s) 20
EarI CTCTTC 1 cut(s) 20
EciI GGCGGA 1 cut(s) 108
EclXI CGGCCG 1 cut(s) 205
Eco105I TACGTA 1 cut(s) 886
Eco130I CCWWGG 1 cut(s) 1415
Eco47I GGWCC 4 cut(s) 574, 1061, 1312, 1487
Eco52I CGGCCG 1 cut(s) 205
Eco57I CTGAAG 1 cut(s) 69
Eco88I CYCGRG 1 cut(s) 314
Eco91I GGTNACC 1 cut(s) 1526
EcoNI CCTNNNNNAGG 1 cut(s) 1605
EcoO109I RGGNCCY 2 cut(s) 574, 1487
EcoO65I GGTNACC 1 cut(s) 1526
EcoRII CCWGG 3 cut(s) 1018, 1489, 1522
EcoT14I CCWWGG 1 cut(s) 1415
ErhI CCWWGG 1 cut(s) 1415
Esp3I CGTCTC 1 cut(s) 921
FaeI CATG 4 cut(s) 1072, 1419, 1521, 1535
FalI AAGNNNNNCTT 2 cut(s) 896, 928
FaqI GGGAC 2 cut(s) 560, 1345
FatI CATG 4 cut(s) 1068, 1415, 1517, 1531
FauNDI CATATG 1 cut(s) 131
FbaI TGATCA 1 cut(s) 258
Fnu4HI GCNGC 8 cut(s) 90, 208, 813, 1227, 1362, 1365, 1554, 1598
Fsp4HI GCNGC 8 cut(s) 90, 208, 813, 1227, 1362, 1365, 1554, 1598
FspBI CTAG 3 cut(s) 402, 834, 1503
GlaI GCGC 1 cut(s) 672
GluI GCNGC 8 cut(s) 90, 208, 813, 1227, 1362, 1365, 1554, 1598
GsaI CCCAGC 1 cut(s) 1272
HaeIII GGCC 5 cut(s) 207, 474, 1278, 1414, 1522
HapII CCGG 1 cut(s) 867
HhaI GCGC 1 cut(s) 673
Hin1II CATG 4 cut(s) 1072, 1419, 1521, 1535
Hin6I GCGC 1 cut(s) 671
HinP1I GCGC 1 cut(s) 671
HincII GTYRAC 2 cut(s) 379, 1036
HindII GTYRAC 2 cut(s) 379, 1036
HindIII AAGCTT 1 cut(s) 245
HinfI GANTC 2 cut(s) 686, 1318
HpaII CCGG 1 cut(s) 867
HphI GGTGA 1 cut(s) 754
Hpy166II GTNNAC 4 cut(s) 141, 379, 682, 1036
Hpy188I TCNGA 8 cut(s) 409, 469, 635, 926, 942, 1220, 1323, 1605
Hpy188III TCNNGA 4 cut(s) 251, 368, 1342, 1396
Hpy8I GTNNAC 4 cut(s) 141, 379, 682, 1036
HpyAV CCTTC 7 cut(s) 162, 485, 699, 722, 739, 997, 1414
HpyCH4III ACNGT 8 cut(s) 193, 376, 542, 932, 1045, 1204, 1393, 1567
HpyCH4IV ACGT 3 cut(s) 461, 885, 1436
HpyF10VI GCNNNNNNNGC 7 cut(s) 809, 972, 1004, 1013, 1269, 1373, 1550
HpyF3I CTNAG 9 cut(s) 9, 104, 434, 508, 626, 1299, 1452, 1470, 1602
HpySE526I ACGT 3 cut(s) 461, 885, 1436
Hsp92II CATG 4 cut(s) 1072, 1419, 1521, 1535
HspAI GCGC 1 cut(s) 671
KflI GGGWCCC 1 cut(s) 574
KroI GCCGGC 1 cut(s) 866
KroNI GCCGGC 1 cut(s) 868
Ksp22I TGATCA 1 cut(s) 258
KspI CCGCGG 1 cut(s) 1365
Kzo9I GATC 7 cut(s) 258, 502, 583, 921, 945, 1493, 1536
LguI GCTCTTC 1 cut(s) 20
LmnI GCTCC 2 cut(s) 410, 1097
Lsp1109I GCAGC 5 cut(s) 76, 799, 1213, 1540, 1584
LweI GCATC 4 cut(s) 400, 631, 790, 1540
MaeI CTAG 3 cut(s) 402, 834, 1503
MaeII ACGT 3 cut(s) 461, 885, 1436
MaeIII GTNAC 7 cut(s) 28, 559, 859, 1187, 1382, 1513, 1526
MalI GATC 7 cut(s) 260, 504, 585, 923, 947, 1495, 1538
MboI GATC 7 cut(s) 258, 502, 583, 921, 945, 1493, 1536
MboII GAAGA 6 cut(s) 7, 346, 389, 707, 714, 743
MhlI GDGCHC 1 cut(s) 1458
MluCI AATT 6 cut(s) 532, 735, 891, 1172, 1345, 1591
MlyI GAGTC 1 cut(s) 680
MmeI TCCRAC 3 cut(s) 244, 949, 1596
MroNI GCCGGC 1 cut(s) 866
MseI TTAA 4 cut(s) 341, 446, 936, 1631
MslI CAYNNNNRTG 1 cut(s) 183
MspA1I CMGCKG 4 cut(s) 89, 298, 1122, 1364
MspI CCGG 1 cut(s) 867
MspR9I CCNGG 3 cut(s) 1020, 1491, 1524
MvaI CCWGG 3 cut(s) 1020, 1491, 1524
MvnI CGCG 2 cut(s) 673, 1364
MwoI GCNNNNNNNGC 7 cut(s) 809, 972, 1004, 1013, 1269, 1373, 1550
NaeI GCCGGC 1 cut(s) 868
NcoI CCATGG 1 cut(s) 1415
NdeI CATATG 1 cut(s) 131
NdeII GATC 7 cut(s) 258, 502, 583, 921, 945, 1493, 1536
NgoMIV GCCGGC 1 cut(s) 866
NlaIII CATG 4 cut(s) 1072, 1419, 1521, 1535
NlaIV GGNNCC 7 cut(s) 283, 575, 576, 710, 1099, 1314, 1614
NmuCI GTSAC 2 cut(s) 859, 1187
NspV TTCGAA 2 cut(s) 1048, 1090
PaeR7I CTCGAG 1 cut(s) 314
PciSI GCTCTTC 1 cut(s) 20
PdiI GCCGGC 1 cut(s) 868
PfeI GAWTC 1 cut(s) 1318
PkrI GCNGC 8 cut(s) 91, 209, 814, 1228, 1363, 1366, 1555, 1599
PleI GAGTC 1 cut(s) 680
PpsI GAGTC 1 cut(s) 680
Ppu21I YACGTR 1 cut(s) 886
PpuMI RGGWCCY 2 cut(s) 574, 1487
PshBI ATTAAT 1 cut(s) 936
PsiI TTATAA 2 cut(s) 695, 876
Psp5II RGGWCCY 2 cut(s) 574, 1487
Psp6I CCWGG 3 cut(s) 1018, 1489, 1522
PspEI GGTNACC 1 cut(s) 1526
PspFI CCCAGC 1 cut(s) 1268
PspGI CCWGG 3 cut(s) 1018, 1489, 1522
PspN4I GGNNCC 7 cut(s) 283, 575, 576, 710, 1099, 1314, 1614
PspPI GGNCC 4 cut(s) 574, 1061, 1312, 1487
PspPPI RGGWCCY 2 cut(s) 574, 1487
PspXI VCTCGAGB 1 cut(s) 314
PstI CTGCAG 2 cut(s) 94, 1231
PstNI CAGNNNCTG 1 cut(s) 1490
PvuII CAGCTG 3 cut(s) 89, 298, 1122
RsaI GTAC 5 cut(s) 529, 539, 884, 911, 1475
RsaNI GTAC 5 cut(s) 528, 538, 883, 910, 1474
RseI CAYNNNNRTG 1 cut(s) 183
SacII CCGCGG 1 cut(s) 1365
SapI GCTCTTC 1 cut(s) 20
SaqAI TTAA 4 cut(s) 341, 446, 936, 1631
SatI GCNGC 8 cut(s) 90, 208, 813, 1227, 1362, 1365, 1554, 1598
Sau3AI GATC 7 cut(s) 258, 502, 583, 921, 945, 1493, 1536
Sau96I GGNCC 4 cut(s) 574, 1061, 1312, 1487
ScaI AGTACT 1 cut(s) 911
SchI GAGTC 1 cut(s) 680
ScrFI CCNGG 3 cut(s) 1020, 1491, 1524
SduI GDGCHC 1 cut(s) 1458
SfaNI GCATC 4 cut(s) 400, 631, 790, 1540
SfcI CTRYAG 5 cut(s) 90, 1117, 1123, 1177, 1227
Sfr274I CTCGAG 1 cut(s) 314
Sfr303I CCGCGG 1 cut(s) 1365
SfuI TTCGAA 2 cut(s) 1048, 1090
SgrBI CCGCGG 1 cut(s) 1365
SinI GGWCC 4 cut(s) 574, 1061, 1312, 1487
SlaI CTCGAG 1 cut(s) 314
SmiMI CAYNNNNRTG 1 cut(s) 183
SmlI CTYRAG 1 cut(s) 314
SmoI CTYRAG 1 cut(s) 314
SnaBI TACGTA 1 cut(s) 886
Sse9I AATT 6 cut(s) 532, 735, 891, 1172, 1345, 1591
SsiI CCGC 6 cut(s) 119, 208, 390, 975, 1362, 1364
SspMI CTAG 3 cut(s) 402, 834, 1503
StyD4I CCNGG 3 cut(s) 1018, 1489, 1522
StyI CCWWGG 1 cut(s) 1415
TaaI ACNGT 8 cut(s) 193, 376, 542, 932, 1045, 1204, 1393, 1567
TaiI ACGT 3 cut(s) 464, 888, 1439
TaqI TCGA 9 cut(s) 315, 614, 700, 899, 1048, 1090, 1283, 1306, 1430
TasI AATT 6 cut(s) 532, 735, 891, 1172, 1345, 1591
TatI WGTACW 3 cut(s) 537, 909, 1473
TauI GCSGC 3 cut(s) 210, 1364, 1367
TfiI GAWTC 1 cut(s) 1318
Tru1I TTAA 4 cut(s) 341, 446, 936, 1631
Tru9I TTAA 4 cut(s) 341, 446, 936, 1631
TscAI CASTG 7 cut(s) 196, 547, 868, 1060, 1396, 1456, 1627
TseFI GTSAC 2 cut(s) 859, 1187
TseI GCWGC 5 cut(s) 89, 812, 1226, 1553, 1597
Tsp45I GTSAC 2 cut(s) 859, 1187
TspDTI ATGAA 5 cut(s) 61, 668, 744, 1201, 1567
TspGWI ACGGA 4 cut(s) 157, 505, 1212, 1325
TspRI CASTG 7 cut(s) 196, 547, 868, 1060, 1396, 1456, 1627
VpaK11BI GGWCC 4 cut(s) 574, 1061, 1312, 1487
VspI ATTAAT 1 cut(s) 936
XagI CCTNNNNNAGG 1 cut(s) 1605
XapI RAATTY 2 cut(s) 532, 735
XcmI CCANNNNNNNNNTGG 3 cut(s) 773, 1006, 1579
XhoI CTCGAG 1 cut(s) 314
XspI CTAG 3 cut(s) 402, 834, 1503
ZrmI AGTACT 1 cut(s) 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.