pycom03g18270

28 kDa heat- and acid-stable phosphoprotein-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
19270148 .. 19275063
4916 bp
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UTR
Exon/CDS
Intron
pycom03g18270.2

Sequence Viewer

Length: 492 bp
ATGGGAAGAGGAAAGTTCAAGGGCAAGCCCACCGGCCGCCGCCAGTTCTCCACTCACGAAGAGATGGTTGCTGGTTCCTCTGCCCGTCCGCGTAGTTTTAAAAGGAAGTTGCAACAATTGGAAGAAGCCGAAGAGGAGGAAGAAGTAGAGTCTGAAGAGGAATCAGAAGAACAGGAAGAATCCGAAAAACGGAAAGGCACTCAGGGAATTATTGAAATTGAGAATCCCAATCTAGTAAAACCAAAGAATGTGAAGGCTAAAAATGTCGATATTGAGAAAACGACTGAACTCTCAAGGCGTGAAAGAGAGGAGATAGAGAAGCAAAAGGCTCATGAGCGGTACATGAGGTTGCAGGAACAGGGAAAAACAGAACAAGCAAAAAAGGATTTAGAACGCTTAGCCATGATTCGCCAACAAAGGGCTGAGGCCGCTAAGAAGCGAGAGGAGGAAAAGGCTGCTAAAGAGCAGAAAAAAGGCGAGGGACGCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

164

Amino Acids

19.11

Weight (kDa)

8.94

Isoelectric Point (pI)

84.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 337
AccII CGCG 1 cut(s) 91
AciI CCGC 5 cut(s) 37, 40, 89, 337, 429
AcoI YGGCCR 1 cut(s) 34
AcuI CTGAAG 1 cut(s) 174
AfaI GTAC 1 cut(s) 341
AfiI CCNNNNNNNGG 2 cut(s) 189, 418
AgsI TTSAA 2 cut(s) 19, 215
AoxI GGCC 2 cut(s) 34, 426
ApeKI GCWGC 1 cut(s) 455
BbvCI CCTCAGC 1 cut(s) 423
BbvI GCAGC 1 cut(s) 442
BccI CCATC 1 cut(s) 58
BfaI CTAG 1 cut(s) 233
BisI GCNGC 4 cut(s) 37, 40, 429, 456
BlpI GCTNAGC 1 cut(s) 397
BlsI GCNGC 4 cut(s) 38, 41, 430, 457
BmiI GGNNCC 1 cut(s) 76
Bpu10I CCTNAGC 1 cut(s) 423
Bpu1102I GCTNAGC 1 cut(s) 397
BpuEI CTTGAG 1 cut(s) 277
Bsc4I CCNNNNNNNGG 2 cut(s) 189, 418
Bse118I RCCGGY 1 cut(s) 32
Bse1I ACTGG 1 cut(s) 43
BseLI CCNNNNNNNGG 2 cut(s) 189, 418
BseMII CTCAG 2 cut(s) 215, 414
BseNI ACTGG 1 cut(s) 43
BseRI GAGGAG 3 cut(s) 149, 323, 458
BseX3I CGGCCG 1 cut(s) 34
BseXI GCAGC 1 cut(s) 442
Bsh1236I CGCG 1 cut(s) 91
Bsh1285I CGRYCG 1 cut(s) 37
BshFI GGCC 2 cut(s) 36, 428
BsiEI CGRYCG 1 cut(s) 37
BsiSI CCGG 1 cut(s) 33
BslI CCNNNNNNNGG 2 cut(s) 189, 418
BsnI GGCC 2 cut(s) 36, 428
Bsp1720I GCTNAGC 1 cut(s) 397
BspACI CCGC 5 cut(s) 37, 40, 89, 337, 429
BspANI GGCC 2 cut(s) 36, 428
BspCNI CTCAG 2 cut(s) 214, 415
BspFNI CGCG 1 cut(s) 91
BspHI TCATGA 1 cut(s) 331
BspLI GGNNCC 1 cut(s) 76
BsrBI CCGCTC 1 cut(s) 337
BsrFI RCCGGY 1 cut(s) 32
BsrI ACTGG 1 cut(s) 43
BssAI RCCGGY 1 cut(s) 32
Bst6I CTCTTC 3 cut(s) 54, 126, 150
BstC8I GCNNGC 1 cut(s) 26
BstDEI CTNAG 4 cut(s) 201, 397, 423, 432
BstFNI CGCG 1 cut(s) 91
BstMCI CGRYCG 1 cut(s) 37
BstMWI GCNNNNNNNGC 2 cut(s) 428, 483
BstUI CGCG 1 cut(s) 91
BstV1I GCAGC 1 cut(s) 442
BstZI CGGCCG 1 cut(s) 34
BsuRI GGCC 2 cut(s) 36, 428
Cac8I GCNNGC 1 cut(s) 26
CciI TCATGA 1 cut(s) 331
Cfr10I RCCGGY 1 cut(s) 32
Csp6I GTAC 1 cut(s) 340
CviAII CATG 3 cut(s) 332, 343, 403
CviJI RGCY 9 cut(s) 28, 36, 128, 257, 329, 401, 422, 428, 455
CviKI_1 RGCY 9 cut(s) 28, 36, 128, 257, 329, 401, 422, 428, 455
CviQI GTAC 1 cut(s) 340
DdeI CTNAG 4 cut(s) 201, 397, 423, 432
DraI TTTAAA 1 cut(s) 100
EaeI YGGCCR 1 cut(s) 34
EagI CGGCCG 1 cut(s) 34
Eam1104I CTCTTC 3 cut(s) 54, 126, 150
EarI CTCTTC 3 cut(s) 54, 126, 150
EclXI CGGCCG 1 cut(s) 34
Eco52I CGGCCG 1 cut(s) 34
Eco57I CTGAAG 1 cut(s) 174
FaeI CATG 3 cut(s) 335, 346, 406
FaiI YATR 3 cut(s) 333, 344, 404
FatI CATG 3 cut(s) 331, 342, 402
Fnu4HI GCNGC 4 cut(s) 37, 40, 429, 456
Fsp4HI GCNGC 4 cut(s) 37, 40, 429, 456
FspBI CTAG 1 cut(s) 233
GluI GCNGC 4 cut(s) 37, 40, 429, 456
HaeIII GGCC 2 cut(s) 36, 428
HapII CCGG 1 cut(s) 33
Hin1II CATG 3 cut(s) 335, 346, 406
HinfI GANTC 5 cut(s) 149, 161, 179, 223, 406
HpaII CCGG 1 cut(s) 33
Hpy188I TCNGA 3 cut(s) 154, 166, 184
Hpy188III TCNNGA 2 cut(s) 56, 332
HpyAV CCTTC 1 cut(s) 247
HpyCH4V TGCA 2 cut(s) 112, 352
HpyF10VI GCNNNNNNNGC 2 cut(s) 428, 483
HpyF3I CTNAG 4 cut(s) 201, 397, 423, 432
Hsp92II CATG 3 cut(s) 335, 346, 406
LpnPI CCDG 7 cut(s) 46, 56, 57, 158, 188, 338, 344
Lsp1109I GCAGC 1 cut(s) 442
MaeI CTAG 1 cut(s) 233
MbiI CCGCTC 1 cut(s) 337
MboII GAAGA 8 cut(s) 18, 71, 134, 143, 152, 167, 179, 188
MfeI CAATTG 1 cut(s) 116
MluCI AATT 3 cut(s) 116, 207, 216
MlyI GAGTC 1 cut(s) 158
MseI TTAA 1 cut(s) 99
MspI CCGG 1 cut(s) 33
MunI CAATTG 1 cut(s) 116
MvnI CGCG 1 cut(s) 91
MwoI GCNNNNNNNGC 2 cut(s) 428, 483
NlaIII CATG 3 cut(s) 335, 346, 406
NlaIV GGNNCC 1 cut(s) 76
PagI TCATGA 1 cut(s) 331
PfeI GAWTC 4 cut(s) 161, 179, 223, 406
PkrI GCNGC 4 cut(s) 38, 41, 430, 457
PleI GAGTC 1 cut(s) 157
PpsI GAGTC 1 cut(s) 157
PspN4I GGNNCC 1 cut(s) 76
RsaI GTAC 1 cut(s) 341
RsaNI GTAC 1 cut(s) 340
SaqAI TTAA 1 cut(s) 99
SatI GCNGC 4 cut(s) 37, 40, 429, 456
SchI GAGTC 1 cut(s) 158
SetI ASST 1 cut(s) 350
SmlI CTYRAG 1 cut(s) 292
SmoI CTYRAG 1 cut(s) 292
Sse9I AATT 3 cut(s) 116, 207, 216
SsiI CCGC 5 cut(s) 37, 40, 89, 337, 429
SspMI CTAG 1 cut(s) 233
TaqI TCGA 1 cut(s) 267
TasI AATT 3 cut(s) 116, 207, 216
TauI GCSGC 3 cut(s) 39, 42, 431
TfiI GAWTC 4 cut(s) 161, 179, 223, 406
Tru1I TTAA 1 cut(s) 99
Tru9I TTAA 1 cut(s) 99
TseI GCWGC 1 cut(s) 455
TspGWI ACGGA 1 cut(s) 205
XspI CTAG 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.