Rh5AG222900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
26460115 .. 26461082
968 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG222900.1

Sequence Viewer

Length: 156 bp
ATGGTTGCAGTTGCTGGTACCTCTTCCCGTCCACGTAGCTTTAGAAGGCTTGAGAAAACAACTGAACTTTCTAGGCGTGAAAGGTATGCAATCTTTCTTATGACTTGTGCATTCAATTTCTATGGGACAAGTTCCGACAAGTCCCTAAATCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

51

Amino Acids

5.85

Weight (kDa)

10.4

Isoelectric Point (pI)

60.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 17
AccB1I GGYRCC 1 cut(s) 17
AfaI GTAC 1 cut(s) 19
AgsI TTSAA 1 cut(s) 115
AluBI AGCT 1 cut(s) 39
AluI AGCT 1 cut(s) 39
AlwNI CAGNNNCTG 1 cut(s) 14
Asp718I GGTACC 1 cut(s) 17
BanI GGYRCC 1 cut(s) 17
BfaI CTAG 1 cut(s) 72
BmiI GGNNCC 1 cut(s) 19
BpuEI CTTGAG 1 cut(s) 71
BsaAI YACGTR 1 cut(s) 35
BshNI GGYRCC 1 cut(s) 17
BslFI GGGAC 2 cut(s) 127, 139
BsmFI GGGAC 2 cut(s) 127, 139
BsmI GAATGC 1 cut(s) 110
BspLI GGNNCC 1 cut(s) 19
BspT107I GGYRCC 1 cut(s) 17
Bst6I CTCTTC 1 cut(s) 28
BstBAI YACGTR 1 cut(s) 35
CaiI CAGNNNCTG 1 cut(s) 14
Csp6I GTAC 1 cut(s) 18
CviJI RGCY 2 cut(s) 39, 49
CviKI_1 RGCY 2 cut(s) 39, 49
CviQI GTAC 1 cut(s) 18
Eam1104I CTCTTC 1 cut(s) 28
EarI CTCTTC 1 cut(s) 28
FaiI YATR 3 cut(s) 87, 101, 123
FaqI GGGAC 2 cut(s) 127, 139
FspBI CTAG 1 cut(s) 72
Hpy166II GTNNAC 1 cut(s) 32
Hpy188I TCNGA 1 cut(s) 136
Hpy8I GTNNAC 1 cut(s) 32
HpyAV CCTTC 1 cut(s) 39
HpyCH4IV ACGT 1 cut(s) 34
HpyCH4V TGCA 3 cut(s) 8, 89, 110
HpySE526I ACGT 1 cut(s) 34
KpnI GGTACC 1 cut(s) 21
MaeI CTAG 1 cut(s) 72
MaeII ACGT 1 cut(s) 34
MboII GAAGA 1 cut(s) 15
MluCI AATT 1 cut(s) 115
MnlI CCTC 1 cut(s) 31
Mva1269I GAATGC 1 cut(s) 110
NlaIV GGNNCC 1 cut(s) 19
PctI GAATGC 1 cut(s) 110
Ppu21I YACGTR 1 cut(s) 35
PspN4I GGNNCC 1 cut(s) 19
PstNI CAGNNNCTG 1 cut(s) 14
RsaI GTAC 1 cut(s) 19
RsaNI GTAC 1 cut(s) 18
SetI ASST 4 cut(s) 23, 37, 41, 86
SgeI CNNG 9 cut(s) 27, 39, 45, 62, 84, 89, 117, 141, 151
SmlI CTYRAG 1 cut(s) 50
SmoI CTYRAG 1 cut(s) 50
Sse9I AATT 1 cut(s) 115
SspMI CTAG 1 cut(s) 72
TaiI ACGT 1 cut(s) 37
TasI AATT 1 cut(s) 115
XspI CTAG 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.