Rmu_sc0005375.1_g000028

28 kDa heat- and acid-stable phosphoprotein-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005375.1
Physical Location & Seq
Forward (+)
119261 .. 122393
3133 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005375.1_g000028.1.cds

Sequence Viewer

Length: 477 bp
atgggaagaggaaagttcaagggcaagcccaccggtcaccgccacttctccactcacgaagagatggttgctggtacctcttcccgtccacgtagctttagaagggaagaagctgaagaggaggaagaagtagagtctgaagaggaatcatcagaagaagaagaagcagaaaagcggaagggtactcagggaatcatagaaattgagaatcccaatctagtaaagccaaagaatgtgaaggctaaaaatgtcgatggtattctgtcagcttcatgtctatctgtttgcagggaggagattgaaaaacaaaaggctcatgagcgatacatgaggttgcaggagcagggaaaaactgaacaagcaaagaaagatttagaacgtttagccatgattcgccaacaaagggcagaggctgctaagaagcgagaagaggagaaggctgccaaggaacagaaaaaaggcgagggacgcaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

158

Amino Acids

18.18

Weight (kDa)

7.75

Isoelectric Point (pI)

77.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 74
AccB1I GGYRCC 1 cut(s) 74
AciI CCGC 2 cut(s) 40, 175
AclI AACGTT 1 cut(s) 379
AcuI CTGAAG 2 cut(s) 135, 159
AfaI GTAC 2 cut(s) 76, 184
AfiI CCNNNNNNNGG 1 cut(s) 403
AgeI ACCGGT 1 cut(s) 32
AgsI TTSAA 2 cut(s) 19, 302
AluBI AGCT 3 cut(s) 96, 113, 269
AluI AGCT 3 cut(s) 96, 113, 269
AlwNI CAGNNNCTG 1 cut(s) 413
ApeKI GCWGC 2 cut(s) 413, 440
AsiGI ACCGGT 1 cut(s) 32
Asp718I GGTACC 1 cut(s) 74
AsuHPI GGTGA 1 cut(s) 29
BanI GGYRCC 1 cut(s) 74
BbvI GCAGC 2 cut(s) 400, 427
BccI CCATC 2 cut(s) 58, 248
BfaI CTAG 1 cut(s) 218
BisI GCNGC 2 cut(s) 414, 441
BlsI GCNGC 2 cut(s) 415, 442
BmiI GGNNCC 1 cut(s) 76
BsaAI YACGTR 1 cut(s) 92
BsaJI CCNNGG 1 cut(s) 444
BsaWI WCCGGW 1 cut(s) 32
Bsc4I CCNNNNNNNGG 1 cut(s) 403
Bse118I RCCGGY 1 cut(s) 32
BseDI CCNNGG 1 cut(s) 444
BseLI CCNNNNNNNGG 1 cut(s) 403
BseMII CTCAG 1 cut(s) 200
BseRI GAGGAG 3 cut(s) 134, 308, 446
BseXI GCAGC 2 cut(s) 400, 427
BshNI GGYRCC 1 cut(s) 74
BshTI ACCGGT 1 cut(s) 32
BsiSI CCGG 1 cut(s) 33
BslI CCNNNNNNNGG 1 cut(s) 403
BspACI CCGC 2 cut(s) 40, 175
BspCNI CTCAG 1 cut(s) 199
BspHI TCATGA 1 cut(s) 316
BspLI GGNNCC 1 cut(s) 76
BspT107I GGYRCC 1 cut(s) 74
BsrFI RCCGGY 1 cut(s) 32
BssAI RCCGGY 1 cut(s) 32
BssECI CCNNGG 1 cut(s) 444
BssT1I CCWWGG 1 cut(s) 444
Bst6I CTCTTC 5 cut(s) 54, 85, 111, 135, 423
BstAPI GCANNNNNTGC 1 cut(s) 413
BstBAI YACGTR 1 cut(s) 92
BstC8I GCNNGC 1 cut(s) 26
BstDEI CTNAG 2 cut(s) 186, 417
BstEII GGTNACC 1 cut(s) 35
BstMWI GCNNNNNNNGC 2 cut(s) 413, 468
BstPI GGTNACC 1 cut(s) 35
BstV1I GCAGC 2 cut(s) 400, 427
Cac8I GCNNGC 1 cut(s) 26
CaiI CAGNNNCTG 1 cut(s) 413
CciI TCATGA 1 cut(s) 316
Cfr10I RCCGGY 1 cut(s) 32
Csp6I GTAC 2 cut(s) 75, 183
CspAI ACCGGT 1 cut(s) 32
CviAII CATG 4 cut(s) 273, 317, 328, 388
CviQI GTAC 2 cut(s) 75, 183
DdeI CTNAG 2 cut(s) 186, 417
Eam1104I CTCTTC 5 cut(s) 54, 85, 111, 135, 423
EarI CTCTTC 5 cut(s) 54, 85, 111, 135, 423
Eco130I CCWWGG 1 cut(s) 444
Eco57I CTGAAG 2 cut(s) 135, 159
Eco91I GGTNACC 1 cut(s) 35
EcoO65I GGTNACC 1 cut(s) 35
EcoT14I CCWWGG 1 cut(s) 444
ErhI CCWWGG 1 cut(s) 444
FaeI CATG 4 cut(s) 276, 320, 331, 391
FaiI YATR 5 cut(s) 197, 274, 318, 329, 389
FatI CATG 4 cut(s) 272, 316, 327, 387
Fnu4HI GCNGC 2 cut(s) 414, 441
Fsp4HI GCNGC 2 cut(s) 414, 441
FspBI CTAG 1 cut(s) 218
GluI GCNGC 2 cut(s) 414, 441
HapII CCGG 1 cut(s) 33
Hin1II CATG 4 cut(s) 276, 320, 331, 391
HinfI GANTC 5 cut(s) 134, 146, 192, 208, 391
HpaII CCGG 1 cut(s) 33
HphI GGTGA 1 cut(s) 29
Hpy166II GTNNAC 1 cut(s) 89
Hpy188I TCNGA 2 cut(s) 139, 154
Hpy188III TCNNGA 2 cut(s) 56, 317
Hpy8I GTNNAC 1 cut(s) 89
HpyAV CCTTC 4 cut(s) 96, 172, 232, 430
HpyCH4IV ACGT 2 cut(s) 91, 379
HpyCH4V TGCA 2 cut(s) 288, 337
HpyF10VI GCNNNNNNNGC 2 cut(s) 413, 468
HpyF3I CTNAG 2 cut(s) 186, 417
HpySE526I ACGT 2 cut(s) 91, 379
Hsp92II CATG 4 cut(s) 276, 320, 331, 391
KpnI GGTACC 1 cut(s) 78
LmnI GCTCC 1 cut(s) 340
LpnPI CCDG 6 cut(s) 46, 57, 173, 274, 323, 329
Lsp1109I GCAGC 2 cut(s) 400, 427
MaeI CTAG 1 cut(s) 218
MaeII ACGT 2 cut(s) 91, 379
MaeIII GTNAC 1 cut(s) 35
MluCI AATT 1 cut(s) 201
MlyI GAGTC 1 cut(s) 143
MnlI CCTC 9 cut(s) 88, 112, 115, 136, 286, 324, 403, 424, 457
MspI CCGG 1 cut(s) 33
MwoI GCNNNNNNNGC 2 cut(s) 413, 468
NlaIII CATG 4 cut(s) 276, 320, 331, 391
NlaIV GGNNCC 1 cut(s) 76
NmuCI GTSAC 1 cut(s) 35
PagI TCATGA 1 cut(s) 316
PfeI GAWTC 4 cut(s) 146, 192, 208, 391
PinAI ACCGGT 1 cut(s) 32
PkrI GCNGC 2 cut(s) 415, 442
PleI GAGTC 1 cut(s) 142
PpsI GAGTC 1 cut(s) 142
Ppu21I YACGTR 1 cut(s) 92
Psp1406I AACGTT 1 cut(s) 379
PspEI GGTNACC 1 cut(s) 35
PspN4I GGNNCC 1 cut(s) 76
PstNI CAGNNNCTG 1 cut(s) 413
RsaI GTAC 2 cut(s) 76, 184
RsaNI GTAC 2 cut(s) 75, 183
SatI GCNGC 2 cut(s) 414, 441
SchI GAGTC 1 cut(s) 143
SetI ASST 7 cut(s) 80, 94, 98, 115, 271, 335, 382
Sse9I AATT 1 cut(s) 201
SsiI CCGC 2 cut(s) 40, 175
SspMI CTAG 1 cut(s) 218
StyI CCWWGG 1 cut(s) 444
TaiI ACGT 2 cut(s) 94, 382
TaqI TCGA 1 cut(s) 252
TasI AATT 1 cut(s) 201
TfiI GAWTC 4 cut(s) 146, 192, 208, 391
TseFI GTSAC 1 cut(s) 35
TseI GCWGC 2 cut(s) 413, 440
Tsp45I GTSAC 1 cut(s) 35
TspDTI ATGAA 1 cut(s) 261
XspI CTAG 1 cut(s) 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.