Rh1BG057200

28 kDa heat- and acid-stable

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Reverse (-)
8484448 .. 8484792
345 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG057200.1

Sequence Viewer

Length: 345 bp
ATGGGCAAGGGCAAGGACAAGTACAAGAGCAAGGCCATTGGCCGTCAACGCCAGTTCTCTACCACCGAAGATCTTCTTATTGACAGTACCTGCACCTATTCAAAGCTAGAAACTGAACATTATGAAGCCGATGAAGTAGAATTTGCAGAAGGATCAGAAGAGGAGGCGTTGAGTGAAGAAGAATCTGAAAACAAGAAAAGCAAAGGCGTTGAAGGCATTATTGAGATCCAAAATCCTAATTTGGTAAAGCAGAAGAAGGCGTTGAAAGCTAGAGACATTGACATTGGAAAAACAACTGAACTGTCAAGGCGTGAAAGAGAAGAAATAGACAGAGAGAAGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

13.07

Weight (kDa)

5.03

Isoelectric Point (pI)

56.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 98
AclWI GGATC 2 cut(s) 160, 220
AcoI YGGCCR 1 cut(s) 40
AcsI RAATTY 1 cut(s) 140
AfaI GTAC 2 cut(s) 23, 88
AgsI TTSAA 3 cut(s) 102, 212, 265
AluBI AGCT 2 cut(s) 106, 269
AluI AGCT 2 cut(s) 106, 269
Alw26I GTCTC 1 cut(s) 267
AlwI GGATC 2 cut(s) 160, 220
AlwNI CAGNNNCTG 1 cut(s) 90
AoxI GGCC 2 cut(s) 33, 40
ApoI RAATTY 1 cut(s) 140
Asp700I GAANNNNTTC 1 cut(s) 72
BceAI ACGGC 1 cut(s) 27
BcoDI GTCTC 1 cut(s) 267
BfaI CTAG 2 cut(s) 107, 270
BfuAI ACCTGC 1 cut(s) 98
BglII AGATCT 1 cut(s) 70
Bse1I ACTGG 1 cut(s) 52
BseNI ACTGG 1 cut(s) 52
BseRI GAGGAG 1 cut(s) 176
BsgI GTGCAG 1 cut(s) 76
BshFI GGCC 2 cut(s) 35, 42
BsmAI GTCTC 1 cut(s) 267
BsnI GGCC 2 cut(s) 35, 42
Bsp143I GATC 3 cut(s) 70, 152, 225
BspANI GGCC 2 cut(s) 35, 42
BspMI ACCTGC 1 cut(s) 98
BspPI GGATC 2 cut(s) 160, 220
BsrI ACTGG 1 cut(s) 52
BssMI GATC 3 cut(s) 70, 152, 225
Bst4CI ACNGT 2 cut(s) 86, 303
Bst6I CTCTTC 1 cut(s) 153
BstKTI GATC 3 cut(s) 73, 155, 228
BstMAI GTCTC 1 cut(s) 267
BstMBI GATC 3 cut(s) 70, 152, 225
BstMWI GCNNNNNNNGC 3 cut(s) 48, 213, 266
BstX2I RGATCY 2 cut(s) 70, 225
BstYI RGATCY 2 cut(s) 70, 225
BsuRI GGCC 2 cut(s) 35, 42
BveI ACCTGC 1 cut(s) 98
CaiI CAGNNNCTG 1 cut(s) 90
Csp6I GTAC 2 cut(s) 22, 87
CviAII CATG 1 cut(s) 342
CviJI RGCY 6 cut(s) 35, 42, 106, 128, 269, 340
CviKI_1 RGCY 6 cut(s) 35, 42, 106, 128, 269, 340
CviQI GTAC 2 cut(s) 22, 87
DpnI GATC 3 cut(s) 72, 154, 227
DpnII GATC 3 cut(s) 70, 152, 225
EaeI YGGCCR 1 cut(s) 40
Eam1104I CTCTTC 1 cut(s) 153
EarI CTCTTC 1 cut(s) 153
FaeI CATG 1 cut(s) 345
FaiI YATR 2 cut(s) 123, 343
FalI AAGNNNNNCTT 2 cut(s) 60, 92
FatI CATG 1 cut(s) 341
FspBI CTAG 2 cut(s) 107, 270
HaeIII GGCC 2 cut(s) 35, 42
Hin1II CATG 1 cut(s) 345
HincII GTYRAC 1 cut(s) 47
HindII GTYRAC 1 cut(s) 47
HinfI GANTC 1 cut(s) 182
Hpy166II GTNNAC 1 cut(s) 47
Hpy188I TCNGA 2 cut(s) 157, 187
Hpy8I GTNNAC 1 cut(s) 47
HpyAV CCTTC 3 cut(s) 143, 206, 250
HpyCH4III ACNGT 2 cut(s) 86, 303
HpyCH4V TGCA 2 cut(s) 93, 146
HpyF10VI GCNNNNNNNGC 3 cut(s) 48, 213, 266
Hsp92II CATG 1 cut(s) 345
Kzo9I GATC 3 cut(s) 70, 152, 225
LpnPI CCDG 2 cut(s) 65, 103
MaeI CTAG 2 cut(s) 107, 270
MalI GATC 3 cut(s) 72, 154, 227
MboI GATC 3 cut(s) 70, 152, 225
MboII GAAGA 7 cut(s) 65, 80, 170, 188, 191, 265, 332
MflI RGATCY 2 cut(s) 70, 225
MluCI AATT 2 cut(s) 140, 238
MnlI CCTC 2 cut(s) 154, 157
MroXI GAANNNNTTC 1 cut(s) 72
MwoI GCNNNNNNNGC 3 cut(s) 48, 213, 266
NdeII GATC 3 cut(s) 70, 152, 225
NlaIII CATG 1 cut(s) 345
PdmI GAANNNNTTC 1 cut(s) 72
PfeI GAWTC 1 cut(s) 182
PstNI CAGNNNCTG 1 cut(s) 90
PsuI RGATCY 2 cut(s) 70, 225
RsaI GTAC 2 cut(s) 23, 88
RsaNI GTAC 2 cut(s) 22, 87
Sau3AI GATC 3 cut(s) 70, 152, 225
SetI ASST 4 cut(s) 92, 98, 108, 271
Sse9I AATT 2 cut(s) 140, 238
SspMI CTAG 2 cut(s) 107, 270
TaaI ACNGT 2 cut(s) 86, 303
TasI AATT 2 cut(s) 140, 238
TatI WGTACW 1 cut(s) 21
TfiI GAWTC 1 cut(s) 182
TspDTI ATGAA 2 cut(s) 138, 147
XapI RAATTY 1 cut(s) 140
XmnI GAANNNNTTC 1 cut(s) 72
XspI CTAG 2 cut(s) 107, 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.