Rh5AG076200

28 kDa heat- and acid-stable

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
6478630 .. 6480136
1507 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG076200.1

Sequence Viewer

Length: 342 bp
ATGGATAGGAGTGAAGTTGCCGGTACCTCCACCCGTCCCCGTTCTTTTTCAAAGCGAGAAGCTGAACATGAGGAAGAACCGGAAGAGGATTTTGTATCCTTCGAAGATGGGTCTGATGGACAAGATGAAAAGAAGAAAGGCGTTCAAGGTATAATCGAGATTGAAAATCCTAATTTGGTAAAACCGAAGACCTTGAAAGCTAAAGACATCGATATTGGAAAACCTACTGAACTCTCACGGCAGCGTTTGGCGCTTATACGACAACAGAGGGAGGAAGCTGCTAAAAAGCGAGAAGAAGAAAAAAATGCTAAAGAACAGAAGAAGGCTGAATCCCGCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

113

Amino Acids

12.98

Weight (kDa)

6.01

Isoelectric Point (pI)

67.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 23
AccB1I GGYRCC 1 cut(s) 23
AciI CCGC 1 cut(s) 334
AfaI GTAC 1 cut(s) 25
AgsI TTSAA 4 cut(s) 51, 146, 164, 196
AluBI AGCT 3 cut(s) 62, 200, 278
AluI AGCT 3 cut(s) 62, 200, 278
ApeKI GCWGC 2 cut(s) 241, 278
Asp718I GGTACC 1 cut(s) 23
AspLEI GCGC 1 cut(s) 253
AsuII TTCGAA 1 cut(s) 102
BanI GGYRCC 1 cut(s) 23
BbsI GAAGAC 1 cut(s) 194
BbvI GCAGC 2 cut(s) 253, 265
BccI CCATC 2 cut(s) 101, 110
BceAI ACGGC 1 cut(s) 254
BciVI GTATCC 1 cut(s) 106
BfoI RGCGCY 1 cut(s) 254
BfuI GTATCC 1 cut(s) 106
BisI GCNGC 2 cut(s) 242, 279
BlsI GCNGC 2 cut(s) 243, 280
BmiI GGNNCC 1 cut(s) 25
BpiI GAAGAC 1 cut(s) 194
Bpu14I TTCGAA 1 cut(s) 102
Bsa29I ATCGAT 1 cut(s) 210
BsaWI WCCGGW 1 cut(s) 79
Bse118I RCCGGY 1 cut(s) 20
BseCI ATCGAT 1 cut(s) 210
BseXI GCAGC 2 cut(s) 253, 265
BshNI GGYRCC 1 cut(s) 23
BshVI ATCGAT 1 cut(s) 210
BsiSI CCGG 2 cut(s) 21, 80
BslFI GGGAC 1 cut(s) 21
BsmFI GGGAC 1 cut(s) 21
Bsp119I TTCGAA 1 cut(s) 102
BspACI CCGC 1 cut(s) 334
BspDI ATCGAT 1 cut(s) 210
BspLI GGNNCC 1 cut(s) 25
BspT104I TTCGAA 1 cut(s) 102
BspT107I GGYRCC 1 cut(s) 23
BsrFI RCCGGY 1 cut(s) 20
BssAI RCCGGY 1 cut(s) 20
Bst6I CTCTTC 1 cut(s) 78
BstBI TTCGAA 1 cut(s) 102
BstH2I RGCGCY 1 cut(s) 254
BstHHI GCGC 1 cut(s) 253
BstMWI GCNNNNNNNGC 1 cut(s) 250
BstV1I GCAGC 2 cut(s) 253, 265
BstV2I GAAGAC 1 cut(s) 194
Bsu15I ATCGAT 1 cut(s) 210
BsuI GTATCC 1 cut(s) 106
BsuTUI ATCGAT 1 cut(s) 210
CfoI GCGC 1 cut(s) 253
Cfr10I RCCGGY 1 cut(s) 20
ClaI ATCGAT 1 cut(s) 210
Csp6I GTAC 1 cut(s) 24
CviAII CATG 1 cut(s) 68
CviJI RGCY 4 cut(s) 62, 200, 278, 326
CviKI_1 RGCY 4 cut(s) 62, 200, 278, 326
CviQI GTAC 1 cut(s) 24
Eam1104I CTCTTC 1 cut(s) 78
EarI CTCTTC 1 cut(s) 78
FaeI CATG 1 cut(s) 71
FaiI YATR 3 cut(s) 69, 152, 257
FaqI GGGAC 1 cut(s) 21
FatI CATG 1 cut(s) 67
Fnu4HI GCNGC 2 cut(s) 242, 279
Fsp4HI GCNGC 2 cut(s) 242, 279
GlaI GCGC 1 cut(s) 252
GluI GCNGC 2 cut(s) 242, 279
HaeII RGCGCY 1 cut(s) 254
HapII CCGG 2 cut(s) 21, 80
HhaI GCGC 1 cut(s) 253
Hin1II CATG 1 cut(s) 71
Hin6I GCGC 1 cut(s) 251
HinP1I GCGC 1 cut(s) 251
HinfI GANTC 1 cut(s) 329
HpaII CCGG 2 cut(s) 21, 80
Hpy188I TCNGA 1 cut(s) 115
Hpy188III TCNNGA 1 cut(s) 157
HpyAV CCTTC 2 cut(s) 109, 316
HpyF10VI GCNNNNNNNGC 1 cut(s) 250
Hsp92II CATG 1 cut(s) 71
HspAI GCGC 1 cut(s) 251
KpnI GGTACC 1 cut(s) 27
LpnPI CCDG 2 cut(s) 34, 93
Lsp1109I GCAGC 2 cut(s) 253, 265
MboII GAAGA 8 cut(s) 86, 95, 116, 145, 199, 305, 308, 331
MluCI AATT 1 cut(s) 172
MnlI CCTC 5 cut(s) 37, 64, 79, 261, 265
MspI CCGG 2 cut(s) 21, 80
MwoI GCNNNNNNNGC 1 cut(s) 250
NlaIII CATG 1 cut(s) 71
NlaIV GGNNCC 1 cut(s) 25
NspV TTCGAA 1 cut(s) 102
PfeI GAWTC 1 cut(s) 329
PkrI GCNGC 2 cut(s) 243, 280
PspN4I GGNNCC 1 cut(s) 25
RsaI GTAC 1 cut(s) 25
RsaNI GTAC 1 cut(s) 24
SatI GCNGC 2 cut(s) 242, 279
SetI ASST 7 cut(s) 29, 64, 151, 194, 202, 226, 280
SfuI TTCGAA 1 cut(s) 102
Sse9I AATT 1 cut(s) 172
SsiI CCGC 1 cut(s) 334
TaqI TCGA 3 cut(s) 102, 156, 210
TasI AATT 1 cut(s) 172
TfiI GAWTC 1 cut(s) 329
TseI GCWGC 2 cut(s) 241, 278
TspDTI ATGAA 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.