pycom10g23990

28 kDa heat- and acid-stable

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
25917100 .. 25923383
6284 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g23990.1

Sequence Viewer

Length: 291 bp
ATGAGCCTCACCTTTCCCCCAGTTCCTGTTGCTGGTACCTCAAGCCGTCCGCGGACTTTTTCAAAGCGGGAAGCTGAGCGTGATGAAGTTGAAGTAGATTTCGTGGCAAGTTCCGAAGAAGAGTCTGGAGATGAATCCGAAGGACATGAGGAGAAGAAGAAGGGGATCCAAGGGATTATTGAGATTGAAAATCCAAATTTGGTAAAGCCGAAGACCATGAAAGCTCAAGACGTTGATATGGGAAGGACAACTGAACTCTCAAGGCGTGAAAGAGAAGAATTGGAGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

10.85

Weight (kDa)

4.83

Isoelectric Point (pI)

73.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 35
AccB1I GGYRCC 1 cut(s) 35
AccII CGCG 1 cut(s) 52
AciI CCGC 3 cut(s) 50, 52, 67
AclWI GGATC 2 cut(s) 160, 173
AcsI RAATTY 1 cut(s) 196
AfaI GTAC 1 cut(s) 37
AfiI CCNNNNNNNGG 1 cut(s) 32
AgsI TTSAA 3 cut(s) 63, 92, 188
AluBI AGCT 2 cut(s) 74, 224
AluI AGCT 2 cut(s) 74, 224
AlwI GGATC 2 cut(s) 160, 173
AlwNI CAGNNNCTG 1 cut(s) 26
ApoI RAATTY 1 cut(s) 196
Asp718I GGTACC 1 cut(s) 35
BamHI GGATCC 1 cut(s) 165
BanI GGYRCC 1 cut(s) 35
BbsI GAAGAC 1 cut(s) 218
BceAI ACGGC 1 cut(s) 30
BlpI GCTNAGC 1 cut(s) 75
BmiI GGNNCC 2 cut(s) 37, 167
BmrI ACTGGG 1 cut(s) 14
BmuI ACTGGG 1 cut(s) 14
BpiI GAAGAC 1 cut(s) 218
BpmI CTGGAG 1 cut(s) 147
Bpu1102I GCTNAGC 1 cut(s) 75
BpuEI CTTGAG 3 cut(s) 25, 210, 244
BsaJI CCNNGG 2 cut(s) 50, 169
Bsc4I CCNNNNNNNGG 1 cut(s) 32
Bse1I ACTGG 1 cut(s) 20
BseDI CCNNGG 2 cut(s) 50, 169
BseLI CCNNNNNNNGG 1 cut(s) 32
BseMII CTCAG 1 cut(s) 66
BseNI ACTGG 1 cut(s) 20
BseRI GAGGAG 1 cut(s) 164
Bsh1236I CGCG 1 cut(s) 52
BshNI GGYRCC 1 cut(s) 35
BslI CCNNNNNNNGG 1 cut(s) 32
Bsp143I GATC 1 cut(s) 165
Bsp1720I GCTNAGC 1 cut(s) 75
BspACI CCGC 3 cut(s) 50, 52, 67
BspCNI CTCAG 1 cut(s) 67
BspFNI CGCG 1 cut(s) 52
BspLI GGNNCC 2 cut(s) 37, 167
BspPI GGATC 2 cut(s) 160, 173
BspT107I GGYRCC 1 cut(s) 35
BsrI ACTGG 1 cut(s) 20
BssECI CCNNGG 2 cut(s) 50, 169
BssMI GATC 1 cut(s) 165
BssT1I CCWWGG 1 cut(s) 169
Bst6I CTCTTC 1 cut(s) 114
BstDEI CTNAG 1 cut(s) 75
BstDSI CCRYGG 1 cut(s) 50
BstFNI CGCG 1 cut(s) 52
BstKTI GATC 1 cut(s) 168
BstMBI GATC 1 cut(s) 165
BstUI CGCG 1 cut(s) 52
BstV2I GAAGAC 1 cut(s) 218
BstX2I RGATCY 1 cut(s) 165
BstYI RGATCY 1 cut(s) 165
BtgI CCRYGG 1 cut(s) 50
CaiI CAGNNNCTG 1 cut(s) 26
Cfr42I CCGCGG 1 cut(s) 53
Csp6I GTAC 1 cut(s) 36
CviAII CATG 2 cut(s) 146, 217
CviJI RGCY 5 cut(s) 6, 45, 74, 208, 224
CviKI_1 RGCY 5 cut(s) 6, 45, 74, 208, 224
CviQI GTAC 1 cut(s) 36
DdeI CTNAG 1 cut(s) 75
DpnI GATC 1 cut(s) 167
DpnII GATC 1 cut(s) 165
Eam1104I CTCTTC 1 cut(s) 114
EarI CTCTTC 1 cut(s) 114
Eco130I CCWWGG 1 cut(s) 169
EcoT14I CCWWGG 1 cut(s) 169
ErhI CCWWGG 1 cut(s) 169
FaeI CATG 2 cut(s) 149, 220
FaiI YATR 3 cut(s) 147, 218, 239
FatI CATG 2 cut(s) 145, 216
FauI CCCGC 1 cut(s) 60
GsuI CTGGAG 1 cut(s) 147
Hin1II CATG 2 cut(s) 149, 220
HinfI GANTC 2 cut(s) 122, 134
Hpy188I TCNGA 2 cut(s) 115, 139
Hpy188III TCNNGA 2 cut(s) 126, 227
HpyAV CCTTC 3 cut(s) 134, 154, 237
HpyCH4IV ACGT 1 cut(s) 231
HpyF3I CTNAG 1 cut(s) 75
HpySE526I ACGT 1 cut(s) 231
Hsp92II CATG 2 cut(s) 149, 220
KpnI GGTACC 1 cut(s) 39
KspI CCGCGG 1 cut(s) 53
Kzo9I GATC 1 cut(s) 165
LpnPI CCDG 4 cut(s) 18, 33, 39, 111
MaeII ACGT 1 cut(s) 231
MalI GATC 1 cut(s) 167
MboI GATC 1 cut(s) 165
MboII GAAGA 6 cut(s) 128, 131, 166, 169, 223, 287
MflI RGATCY 1 cut(s) 165
MluCI AATT 2 cut(s) 196, 278
MlyI GAGTC 1 cut(s) 131
MnlI CCTC 3 cut(s) 17, 49, 142
MspA1I CMGCKG 1 cut(s) 52
MvnI CGCG 1 cut(s) 52
NdeII GATC 1 cut(s) 165
NlaIII CATG 2 cut(s) 149, 220
NlaIV GGNNCC 2 cut(s) 37, 167
PfeI GAWTC 1 cut(s) 134
PleI GAGTC 1 cut(s) 130
PpsI GAGTC 1 cut(s) 130
PspN4I GGNNCC 2 cut(s) 37, 167
PstNI CAGNNNCTG 1 cut(s) 26
PsuI RGATCY 1 cut(s) 165
RsaI GTAC 1 cut(s) 37
RsaNI GTAC 1 cut(s) 36
SacII CCGCGG 1 cut(s) 53
Sau3AI GATC 1 cut(s) 165
SchI GAGTC 1 cut(s) 131
SetI ASST 5 cut(s) 14, 41, 76, 226, 234
Sfr303I CCGCGG 1 cut(s) 53
SgrBI CCGCGG 1 cut(s) 53
SmlI CTYRAG 3 cut(s) 40, 225, 259
SmoI CTYRAG 3 cut(s) 40, 225, 259
Sse9I AATT 2 cut(s) 196, 278
SsiI CCGC 3 cut(s) 50, 52, 67
StyI CCWWGG 1 cut(s) 169
TaiI ACGT 1 cut(s) 234
TasI AATT 2 cut(s) 196, 278
TfiI GAWTC 1 cut(s) 134
TspDTI ATGAA 3 cut(s) 99, 147, 233
XapI RAATTY 1 cut(s) 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.