RLG00000033356

28 kDa heat- and acid-stable phosphoprotein-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
26198336 .. 26200864
2529 bp
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UTR
Exon/CDS
Intron
RLM00000033356

Sequence Viewer

Length: 384 bp
ATGATTGCAGTTGCTGGTACCTCTGCCCGTCCACGTAGCTTTAGAAGGGAAGAAGCTGAAGAGGAGGAAGAAGTAGAGTCTGAAGAGGAATCATCAGAAGAAGAAGAAGCAGAAAAGCGGAAGGGTACTCAGGGAATCATAGAAATTGAGAATCCCAATCTAGTAAAGCCAAAGAATGTGAAGGCTAAAAATGTCGATCTTGAGAAAACAACTGAACTTTCTAGGCGTGAAAGTCTCTTCTCCAAAAGAAGAAAAAAGGAAAAAGAAAAAAAGAACCATTTTAAACGTCTAGCCATGATTCGCCAACAAAGGGCAGAGGCTGCTAAGAAGCGAGAAGAGGAGAAGGCTGCCAAGGAACAGAAAAAAGGCGAGGCACGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

128

Amino Acids

14.85

Weight (kDa)

9.37

Isoelectric Point (pI)

85.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 17
AccB1I GGYRCC 1 cut(s) 17
AciI CCGC 1 cut(s) 118
AcuI CTGAAG 2 cut(s) 78, 102
AfaI GTAC 2 cut(s) 19, 127
AfiI CCNNNNNNNGG 1 cut(s) 310
AleI CACNNNNGTG 1 cut(s) 379
AluBI AGCT 2 cut(s) 39, 56
AluI AGCT 2 cut(s) 39, 56
Alw26I GTCTC 1 cut(s) 239
AlwNI CAGNNNCTG 2 cut(s) 14, 320
ApeKI GCWGC 2 cut(s) 320, 347
Asp718I GGTACC 1 cut(s) 17
BanI GGYRCC 1 cut(s) 17
BbvI GCAGC 2 cut(s) 307, 334
BcoDI GTCTC 1 cut(s) 239
BfaI CTAG 3 cut(s) 161, 222, 290
BisI GCNGC 2 cut(s) 321, 348
BlsI GCNGC 2 cut(s) 322, 349
BmiI GGNNCC 1 cut(s) 19
BpuEI CTTGAG 1 cut(s) 221
BsaAI YACGTR 1 cut(s) 35
BsaJI CCNNGG 1 cut(s) 351
Bsc4I CCNNNNNNNGG 1 cut(s) 310
BseDI CCNNGG 1 cut(s) 351
BseLI CCNNNNNNNGG 1 cut(s) 310
BseMII CTCAG 1 cut(s) 143
BseRI GAGGAG 2 cut(s) 77, 353
BseXI GCAGC 2 cut(s) 307, 334
BshNI GGYRCC 1 cut(s) 17
BslI CCNNNNNNNGG 1 cut(s) 310
BsmAI GTCTC 1 cut(s) 239
Bsp143I GATC 1 cut(s) 196
BspACI CCGC 1 cut(s) 118
BspCNI CTCAG 1 cut(s) 142
BspLI GGNNCC 1 cut(s) 19
BspT107I GGYRCC 1 cut(s) 17
BssECI CCNNGG 1 cut(s) 351
BssMI GATC 1 cut(s) 196
BssT1I CCWWGG 1 cut(s) 351
Bst6I CTCTTC 4 cut(s) 54, 78, 242, 330
BstAPI GCANNNNNTGC 1 cut(s) 320
BstBAI YACGTR 1 cut(s) 35
BstDEI CTNAG 2 cut(s) 129, 324
BstKTI GATC 1 cut(s) 199
BstMAI GTCTC 1 cut(s) 239
BstMBI GATC 1 cut(s) 196
BstMWI GCNNNNNNNGC 1 cut(s) 320
BstV1I GCAGC 2 cut(s) 307, 334
CaiI CAGNNNCTG 2 cut(s) 14, 320
Csp6I GTAC 2 cut(s) 18, 126
CviAII CATG 1 cut(s) 295
CviJI RGCY 7 cut(s) 39, 56, 169, 185, 293, 320, 347
CviKI_1 RGCY 7 cut(s) 39, 56, 169, 185, 293, 320, 347
CviQI GTAC 2 cut(s) 18, 126
DdeI CTNAG 2 cut(s) 129, 324
DpnI GATC 1 cut(s) 198
DpnII GATC 1 cut(s) 196
DraI TTTAAA 1 cut(s) 283
Eam1104I CTCTTC 4 cut(s) 54, 78, 242, 330
EarI CTCTTC 4 cut(s) 54, 78, 242, 330
Eco130I CCWWGG 1 cut(s) 351
Eco57I CTGAAG 2 cut(s) 78, 102
EcoT14I CCWWGG 1 cut(s) 351
ErhI CCWWGG 1 cut(s) 351
FaeI CATG 1 cut(s) 298
FaiI YATR 2 cut(s) 140, 296
FatI CATG 1 cut(s) 294
Fnu4HI GCNGC 2 cut(s) 321, 348
Fsp4HI GCNGC 2 cut(s) 321, 348
FspBI CTAG 3 cut(s) 161, 222, 290
GluI GCNGC 2 cut(s) 321, 348
Hin1II CATG 1 cut(s) 298
HinfI GANTC 5 cut(s) 77, 89, 135, 151, 298
Hpy166II GTNNAC 1 cut(s) 32
Hpy188I TCNGA 2 cut(s) 82, 97
Hpy188III TCNNGA 1 cut(s) 200
Hpy8I GTNNAC 1 cut(s) 32
HpyAV CCTTC 4 cut(s) 39, 115, 175, 337
HpyCH4IV ACGT 2 cut(s) 34, 286
HpyCH4V TGCA 1 cut(s) 8
HpyF10VI GCNNNNNNNGC 1 cut(s) 320
HpyF3I CTNAG 2 cut(s) 129, 324
HpySE526I ACGT 2 cut(s) 34, 286
Hsp92II CATG 1 cut(s) 298
KpnI GGTACC 1 cut(s) 21
Kzo9I GATC 1 cut(s) 196
LpnPI CCDG 1 cut(s) 116
Lsp1109I GCAGC 2 cut(s) 307, 334
MaeI CTAG 3 cut(s) 161, 222, 290
MaeII ACGT 2 cut(s) 34, 286
MalI GATC 1 cut(s) 198
MboI GATC 1 cut(s) 196
MluCI AATT 1 cut(s) 144
MlyI GAGTC 1 cut(s) 86
MnlI CCTC 7 cut(s) 31, 55, 58, 79, 310, 331, 364
MseI TTAA 1 cut(s) 282
MslI CAYNNNNRTG 1 cut(s) 379
MwoI GCNNNNNNNGC 1 cut(s) 320
NdeII GATC 1 cut(s) 196
NlaIII CATG 1 cut(s) 298
NlaIV GGNNCC 1 cut(s) 19
OliI CACNNNNGTG 1 cut(s) 379
PfeI GAWTC 4 cut(s) 89, 135, 151, 298
PkrI GCNGC 2 cut(s) 322, 349
PleI GAGTC 1 cut(s) 85
PpsI GAGTC 1 cut(s) 85
Ppu21I YACGTR 1 cut(s) 35
PspN4I GGNNCC 1 cut(s) 19
PstNI CAGNNNCTG 2 cut(s) 14, 320
RsaI GTAC 2 cut(s) 19, 127
RsaNI GTAC 2 cut(s) 18, 126
RseI CAYNNNNRTG 1 cut(s) 379
SaqAI TTAA 1 cut(s) 282
SatI GCNGC 2 cut(s) 321, 348
Sau3AI GATC 1 cut(s) 196
SchI GAGTC 1 cut(s) 86
SetI ASST 5 cut(s) 23, 37, 41, 58, 289
SmiMI CAYNNNNRTG 1 cut(s) 379
SmlI CTYRAG 1 cut(s) 200
SmoI CTYRAG 1 cut(s) 200
Sse9I AATT 1 cut(s) 144
SsiI CCGC 1 cut(s) 118
SspMI CTAG 3 cut(s) 161, 222, 290
StyI CCWWGG 1 cut(s) 351
TaiI ACGT 2 cut(s) 37, 289
TaqI TCGA 1 cut(s) 195
TasI AATT 1 cut(s) 144
TfiI GAWTC 4 cut(s) 89, 135, 151, 298
Tru1I TTAA 1 cut(s) 282
Tru9I TTAA 1 cut(s) 282
TseI GCWGC 2 cut(s) 320, 347
XspI CTAG 3 cut(s) 161, 222, 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.