pycom13g29000

Protein of unknown function (DUF1639)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
25330530 .. 25330730
201 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g29000.1

Sequence Viewer

Length: 201 bp
ATGGTGTATATAAATGGGTCCGATAAGGAGGAGATAGTGGAGCTGAAGTCCATGGCGATGGGTTCTGAGAGGGCAAAGCCTCTGCACAATTTCAACTTGTCGTGGTATTTGAAATGGGGGAACCAGAAGCACCTGTGGTGCCAGAAGGAGAGCTTTGACGCGAGCGGGAGTGGCGGGGAAGGCTCTGGGGTTAATCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

7.43

Weight (kDa)

6.71

Isoelectric Point (pI)

18.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 138
AccBSI CCGCTC 1 cut(s) 165
AccII CGCG 1 cut(s) 161
AciI CCGC 2 cut(s) 165, 174
AcuI CTGAAG 1 cut(s) 65
AgsI TTSAA 2 cut(s) 94, 112
AluBI AGCT 2 cut(s) 43, 153
AluI AGCT 2 cut(s) 43, 153
AspS9I GGNCC 1 cut(s) 18
AvaII GGWCC 1 cut(s) 18
BanI GGYRCC 1 cut(s) 138
BccI CCATC 1 cut(s) 52
Bme18I GGWCC 1 cut(s) 18
BmgT120I GGNCC 1 cut(s) 18
BmiI GGNNCC 3 cut(s) 19, 122, 140
Bsa29I ATCGAT 1 cut(s) 196
BsaJI CCNNGG 1 cut(s) 51
BsaXI ACNNNNNCTCC 2 cut(s) 32, 62
BseCI ATCGAT 1 cut(s) 196
BseDI CCNNGG 1 cut(s) 51
BseMII CTCAG 1 cut(s) 57
BseRI GAGGAG 1 cut(s) 44
BsgI GTGCAG 1 cut(s) 68
Bsh1236I CGCG 1 cut(s) 161
BshNI GGYRCC 1 cut(s) 138
BshVI ATCGAT 1 cut(s) 196
Bsp19I CCATGG 1 cut(s) 51
BspACI CCGC 2 cut(s) 165, 174
BspCNI CTCAG 1 cut(s) 58
BspDI ATCGAT 1 cut(s) 196
BspFNI CGCG 1 cut(s) 161
BspLI GGNNCC 3 cut(s) 19, 122, 140
BspT107I GGYRCC 1 cut(s) 138
BsrBI CCGCTC 1 cut(s) 165
BssECI CCNNGG 1 cut(s) 51
BssT1I CCWWGG 1 cut(s) 51
BstC8I GCNNGC 1 cut(s) 163
BstDEI CTNAG 1 cut(s) 66
BstDSI CCRYGG 1 cut(s) 51
BstFNI CGCG 1 cut(s) 161
BstMWI GCNNNNNNNGC 2 cut(s) 171, 180
BstUI CGCG 1 cut(s) 161
BstXI CCANNNNNNTGG 1 cut(s) 58
Bsu15I ATCGAT 1 cut(s) 196
BsuTUI ATCGAT 1 cut(s) 196
BtgI CCRYGG 1 cut(s) 51
BtgZI GCGATG 1 cut(s) 71
Cac8I GCNNGC 1 cut(s) 163
Cfr13I GGNCC 1 cut(s) 18
ClaI ATCGAT 1 cut(s) 196
CseI GACGC 1 cut(s) 167
CviAII CATG 1 cut(s) 52
CviJI RGCY 4 cut(s) 43, 79, 153, 183
CviKI_1 RGCY 4 cut(s) 43, 79, 153, 183
DdeI CTNAG 1 cut(s) 66
Eco130I CCWWGG 1 cut(s) 51
Eco47I GGWCC 1 cut(s) 18
Eco57I CTGAAG 1 cut(s) 65
EcoT14I CCWWGG 1 cut(s) 51
ErhI CCWWGG 1 cut(s) 51
FaeI CATG 1 cut(s) 55
FaiI YATR 3 cut(s) 9, 11, 53
FalI AAGNNNNNCTT 2 cut(s) 137, 169
FatI CATG 1 cut(s) 51
FauI CCCGC 2 cut(s) 158, 167
HgaI GACGC 1 cut(s) 167
Hin1II CATG 1 cut(s) 55
Hpy188I TCNGA 2 cut(s) 22, 67
HpyAV CCTTC 2 cut(s) 139, 173
HpyCH4V TGCA 1 cut(s) 85
HpyF10VI GCNNNNNNNGC 2 cut(s) 171, 180
HpyF3I CTNAG 1 cut(s) 66
Hsp92II CATG 1 cut(s) 55
LmnI GCTCC 1 cut(s) 40
LpnPI CCDG 4 cut(s) 137, 146, 155, 171
MbiI CCGCTC 1 cut(s) 165
MluCI AATT 1 cut(s) 88
MnlI CCTC 3 cut(s) 22, 63, 90
MseI TTAA 1 cut(s) 192
MslI CAYNNNNRTG 1 cut(s) 56
MvnI CGCG 1 cut(s) 161
MwoI GCNNNNNNNGC 2 cut(s) 171, 180
NcoI CCATGG 1 cut(s) 51
NlaIII CATG 1 cut(s) 55
NlaIV GGNNCC 3 cut(s) 19, 122, 140
PspN4I GGNNCC 3 cut(s) 19, 122, 140
PspPI GGNCC 1 cut(s) 18
RseI CAYNNNNRTG 1 cut(s) 56
SaqAI TTAA 1 cut(s) 192
Sau96I GGNCC 1 cut(s) 18
SetI ASST 3 cut(s) 45, 135, 155
SinI GGWCC 1 cut(s) 18
SmiMI CAYNNNNRTG 1 cut(s) 56
Sse9I AATT 1 cut(s) 88
SsiI CCGC 2 cut(s) 165, 174
StyI CCWWGG 1 cut(s) 51
TaqI TCGA 1 cut(s) 196
TasI AATT 1 cut(s) 88
Tru1I TTAA 1 cut(s) 192
Tru9I TTAA 1 cut(s) 192
VpaK11BI GGWCC 1 cut(s) 18
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.