pycom16g03510

Protein of unknown function (DUF1639)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
2174030 .. 2175350
1321 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g03510.3

Sequence Viewer

Length: 933 bp
ATGGTGTATATAGGCGGGTCGGAGGAGGAGGAGAGAGTGGAGGCGAAGTCCATGGCGATGGGTTCCGAGAGGACGAAGCCTCTGCACAATTTCAACTTGCCGTGGGATTTGAAGTGGGGGAACCAGAGGCACCTGCGGTGCCAGAAGGAGAGCTCCGACGCCGGCGGGAGTGGCGGGGAAGGGTCTGGGGTTAATCGGCGATCGTCGGTTCAGAGGATTGAGAGCTCGCCGGTGGTGATGACTCGGCGGAGGGATTTGGAGTTCGAGAAGCGCAAGTTTCGGCCCTCGAGGCCGAGGATCGAGAACGACGACGCGGAGGAAGGGATCGATGCGTTTAGGCAGAAGCTCATGTTTGATCTCAAGACGGCGGCGGATAAGATGAAAGACGCGATTTTGAGGGAGGAGGAGGTGGCAGTGGCGGGGGCGGCTGCTGATACTCACGTGGCGGCGGAAGAAGAGGATGTTGAGATGGCGGAGGTTGGGGAATCGGAACCTCCGGTGGCGCCGGAGCCGCCGGAGGCGAGGCCATGGAATCTGAGGACGAGAAGGGCGGCGTGCAAGTCTCCAATCGGCGGCGGCGGTGGTGCTAAGGGGGTGAGAATCGAGGAGAAGAAGGCGAGTTACTCGCCGTTGAGGAGTGAGGGTAACAATGGCGTGAAGTCGCCAAGGCTGGTCAGAGGGGCTTCGGGTTCGGGTTCGGGTCCGGAGAAGAATAAGGAGGAGGAGAGGCCCAAGTTTTCATTGACGCTCAACAAGAAGGAGATCGAGGAAGATTTCATGAAGATGCTCGGCCACCGCCCTCCCCGTCGGCCAAAGAGGCGGCCAAGAAATGTTCAGAAGCAATTGGAAGGTTTGTTTCCCGGTACGTGGTTGACGGAGGTCTCGGCGGAGACGTACAAGGTTCCTGAGGTCCCTGAAAATACAAAGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

311

Amino Acids

34.64

Weight (kDa)

8.91

Isoelectric Point (pI)

81.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 141
AbsI CCTCGAGG 1 cut(s) 286
Acc36I ACCTGC 1 cut(s) 141
AccB1I GGYRCC 3 cut(s) 129, 138, 502
AccII CGCG 2 cut(s) 314, 389
AccIII TCCGGA 1 cut(s) 703
AclWI GGATC 2 cut(s) 305, 332
AcoI YGGCCR 3 cut(s) 790, 809, 821
AcvI CACGTG 1 cut(s) 442
AcyI GRCGYC 2 cut(s) 159, 503
AfaI GTAC 2 cut(s) 865, 896
AfiI CCNNNNNNNGG 2 cut(s) 572, 867
AgsI TTSAA 2 cut(s) 94, 112
AloI GAACNNNNNNTCC 2 cut(s) 245, 277
AluBI AGCT 3 cut(s) 153, 225, 346
AluI AGCT 3 cut(s) 153, 225, 346
Alw21I GWGCWC 2 cut(s) 155, 227
Alw26I GTCTC 3 cut(s) 567, 884, 886
AlwI GGATC 2 cut(s) 305, 332
Ama87I CYCGRG 1 cut(s) 286
Aor13HI TCCGGA 1 cut(s) 703
AoxI GGCC 7 cut(s) 281, 290, 524, 728, 790, 809, 821
ApeKI GCWGC 1 cut(s) 428
AspLEI GCGC 2 cut(s) 273, 505
AspS9I GGNCC 4 cut(s) 282, 701, 729, 910
AsuC2I CCSGG 1 cut(s) 861
AsuHPI GGTGA 2 cut(s) 247, 607
AvaI CYCGRG 1 cut(s) 286
AvaII GGWCC 2 cut(s) 701, 910
AxyI CCTNAGG 1 cut(s) 906
BaeI ACNNNNGTAYC 2 cut(s) 426, 459
BanI GGYRCC 3 cut(s) 129, 138, 502
BanII GRGCYC 2 cut(s) 155, 227
BarI GAAGNNNNNNTAC 2 cut(s) 605, 637
BbrPI CACGTG 1 cut(s) 442
Bbv12I GWGCWC 2 cut(s) 155, 227
BbvI GCAGC 1 cut(s) 415
BccI CCATC 2 cut(s) 52, 463
BceAI ACGGC 3 cut(s) 85, 381, 613
BcgI CGANNNNNNTGC 2 cut(s) 64, 98
BcnI CCSGG 1 cut(s) 861
BcoDI GTCTC 3 cut(s) 567, 884, 886
BfoI RGCGCY 1 cut(s) 506
BfuAI ACCTGC 1 cut(s) 141
BglI GCCNNNNNGGC 2 cut(s) 289, 817
BisI GCNGC 9 cut(s) 369, 426, 429, 447, 512, 552, 574, 577, 821
BlsI GCNGC 9 cut(s) 370, 427, 430, 448, 513, 553, 575, 578, 822
Bme1390I CCNGG 1 cut(s) 861
Bme18I GGWCC 2 cut(s) 701, 910
BmeT110I CYCGRG 1 cut(s) 286
BmgT120I GGNCC 4 cut(s) 282, 701, 729, 910
BmrFI CCNGG 1 cut(s) 861
BmsI GCATC 2 cut(s) 319, 774
BoxI GACNNNNGTC 1 cut(s) 878
Bpu10I CCTNAGC 1 cut(s) 588
BpuEI CTTGAG 1 cut(s) 344
BpuMI CCSGG 1 cut(s) 861
Bsa29I ATCGAT 1 cut(s) 327
BsaAI YACGTR 2 cut(s) 442, 867
BsaHI GRCGYC 2 cut(s) 159, 503
BsaI GGTCTC 1 cut(s) 886
BsaJI CCNNGG 5 cut(s) 51, 101, 293, 527, 665
BsaWI WCCGGW 2 cut(s) 496, 703
BsaXI ACNNNNNCTCC 4 cut(s) 32, 62, 628, 658
Bsc4I CCNNNNNNNGG 2 cut(s) 572, 867
Bse118I RCCGGY 2 cut(s) 161, 229
Bse21I CCTNAGG 1 cut(s) 906
BseAI TCCGGA 1 cut(s) 703
BseCI ATCGAT 1 cut(s) 327
BseDI CCNNGG 5 cut(s) 51, 101, 293, 527, 665
BseGI GGATG 1 cut(s) 466
BseLI CCNNNNNNNGG 2 cut(s) 572, 867
BseMII CTCAG 2 cut(s) 527, 897
BseRI GAGGAG 9 cut(s) 38, 41, 44, 416, 419, 620, 649, 734, 737
BseXI GCAGC 1 cut(s) 415
BsgI GTGCAG 1 cut(s) 68
Bsh1236I CGCG 2 cut(s) 314, 389
Bsh1285I CGRYCG 1 cut(s) 203
BshFI GGCC 7 cut(s) 283, 292, 526, 730, 792, 811, 823
BshNI GGYRCC 3 cut(s) 129, 138, 502
BshVI ATCGAT 1 cut(s) 327
BsiEI CGRYCG 1 cut(s) 203
BsiHKAI GWGCWC 2 cut(s) 155, 227
BsiHKCI CYCGRG 1 cut(s) 286
BsiSI CCGG 7 cut(s) 162, 230, 497, 506, 515, 704, 861
BslFI GGGAC 1 cut(s) 896
BslI CCNNNNNNNGG 2 cut(s) 572, 867
BsmAI GTCTC 3 cut(s) 567, 884, 886
BsmBI CGTCTC 1 cut(s) 884
BsmFI GGGAC 1 cut(s) 896
BsnI GGCC 7 cut(s) 283, 292, 526, 730, 792, 811, 823
Bso31I GGTCTC 1 cut(s) 886
BsoBI CYCGRG 1 cut(s) 286
Bsp1286I GDGCHC 2 cut(s) 155, 227
Bsp13I TCCGGA 1 cut(s) 703
Bsp143I GATC 5 cut(s) 200, 297, 324, 355, 762
Bsp19I CCATGG 2 cut(s) 51, 527
BspANI GGCC 7 cut(s) 283, 292, 526, 730, 792, 811, 823
BspCNI CTCAG 2 cut(s) 528, 898
BspDI ATCGAT 1 cut(s) 327
BspEI TCCGGA 1 cut(s) 703
BspFNI CGCG 2 cut(s) 314, 389
BspHI TCATGA 1 cut(s) 777
BspMI ACCTGC 1 cut(s) 141
BspPI GGATC 2 cut(s) 305, 332
BspT107I GGYRCC 3 cut(s) 129, 138, 502
BspTNI GGTCTC 1 cut(s) 886
BsrFI RCCGGY 2 cut(s) 161, 229
BssAI RCCGGY 2 cut(s) 161, 229
BssECI CCNNGG 5 cut(s) 51, 101, 293, 527, 665
BssMI GATC 5 cut(s) 200, 297, 324, 355, 762
BssNI GRCGYC 2 cut(s) 159, 503
BssT1I CCWWGG 3 cut(s) 51, 527, 665
Bst6I CTCTTC 1 cut(s) 450
BstACI GRCGYC 2 cut(s) 159, 503
BstBAI YACGTR 2 cut(s) 442, 867
BstC8I GCNNGC 3 cut(s) 163, 227, 556
BstDEI CTNAG 3 cut(s) 536, 588, 906
BstDSI CCRYGG 3 cut(s) 51, 101, 527
BstF5I GGATG 1 cut(s) 466
BstFNI CGCG 2 cut(s) 314, 389
BstH2I RGCGCY 1 cut(s) 506
BstHHI GCGC 2 cut(s) 273, 505
BstKTI GATC 5 cut(s) 203, 300, 327, 358, 765
BstMAI GTCTC 3 cut(s) 567, 884, 886
BstMBI GATC 5 cut(s) 200, 297, 324, 355, 762
BstMCI CGRYCG 1 cut(s) 203
BstMWI GCNNNNNNNGC 5 cut(s) 171, 289, 425, 511, 817
BstPAI GACNNNNGTC 1 cut(s) 878
BstSCI CCNGG 1 cut(s) 859
BstUI CGCG 2 cut(s) 314, 389
BstV1I GCAGC 1 cut(s) 415
BstXI CCANNNNNNTGG 1 cut(s) 58
Bsu15I ATCGAT 1 cut(s) 327
Bsu36I CCTNAGG 1 cut(s) 906
BsuRI GGCC 7 cut(s) 283, 292, 526, 730, 792, 811, 823
BsuTUI ATCGAT 1 cut(s) 327
BtgI CCRYGG 3 cut(s) 51, 101, 527
BtgZI GCGATG 1 cut(s) 71
BtsCI GGATG 1 cut(s) 466
BtsI GCAGTG 1 cut(s) 420
BtsIMutI CAGTG 1 cut(s) 420
BveI ACCTGC 1 cut(s) 141
Cac8I GCNNGC 3 cut(s) 163, 227, 556
CciI TCATGA 1 cut(s) 777
CfoI GCGC 2 cut(s) 273, 505
Cfr10I RCCGGY 2 cut(s) 161, 229
Cfr13I GGNCC 4 cut(s) 282, 701, 729, 910
ClaI ATCGAT 1 cut(s) 327
CseI GACGC 4 cut(s) 167, 320, 395, 754
Csp6I GTAC 2 cut(s) 864, 895
CviAII CATG 4 cut(s) 52, 349, 528, 778
CviQI GTAC 2 cut(s) 864, 895
DdeI CTNAG 3 cut(s) 536, 588, 906
DinI GGCGCC 1 cut(s) 504
DpnI GATC 5 cut(s) 202, 299, 326, 357, 764
DpnII GATC 5 cut(s) 200, 297, 324, 355, 762
EaeI YGGCCR 3 cut(s) 790, 809, 821
Eam1104I CTCTTC 1 cut(s) 450
EarI CTCTTC 1 cut(s) 450
EciI GGCGGA 5 cut(s) 262, 386, 464, 488, 902
Ecl136II GAGCTC 2 cut(s) 153, 225
Eco130I CCWWGG 3 cut(s) 51, 527, 665
Eco24I GRGCYC 2 cut(s) 155, 227
Eco31I GGTCTC 1 cut(s) 886
Eco47I GGWCC 2 cut(s) 701, 910
Eco53kI GAGCTC 2 cut(s) 153, 225
Eco72I CACGTG 1 cut(s) 442
Eco81I CCTNAGG 1 cut(s) 906
Eco88I CYCGRG 1 cut(s) 286
EcoICRI GAGCTC 2 cut(s) 153, 225
EcoO109I RGGNCCY 1 cut(s) 910
EcoT14I CCWWGG 3 cut(s) 51, 527, 665
EcoT38I GRGCYC 2 cut(s) 155, 227
EgeI GGCGCC 1 cut(s) 504
EheI GGCGCC 1 cut(s) 504
ErhI CCWWGG 3 cut(s) 51, 527, 665
Esp3I CGTCTC 1 cut(s) 884
FaeI CATG 4 cut(s) 55, 352, 531, 781
FaiI YATR 6 cut(s) 9, 11, 53, 350, 529, 779
FaqI GGGAC 1 cut(s) 896
FatI CATG 4 cut(s) 51, 348, 527, 777
FauI CCCGC 4 cut(s) 8, 158, 167, 412
Fnu4HI GCNGC 9 cut(s) 369, 426, 429, 447, 512, 552, 574, 577, 821
FokI GGATG 1 cut(s) 473
FriOI GRGCYC 2 cut(s) 155, 227
Fsp4HI GCNGC 9 cut(s) 369, 426, 429, 447, 512, 552, 574, 577, 821
GlaI GCGC 2 cut(s) 272, 504
GluI GCNGC 9 cut(s) 369, 426, 429, 447, 512, 552, 574, 577, 821
HaeII RGCGCY 1 cut(s) 506
HaeIII GGCC 7 cut(s) 283, 292, 526, 730, 792, 811, 823
HapII CCGG 7 cut(s) 162, 230, 497, 506, 515, 704, 861
HgaI GACGC 4 cut(s) 167, 320, 395, 754
HhaI GCGC 2 cut(s) 273, 505
Hin1I GRCGYC 2 cut(s) 159, 503
Hin1II CATG 4 cut(s) 55, 352, 531, 781
Hin6I GCGC 2 cut(s) 271, 503
HinP1I GCGC 2 cut(s) 271, 503
HincII GTYRAC 1 cut(s) 873
HindII GTYRAC 1 cut(s) 873
HinfI GANTC 4 cut(s) 241, 485, 532, 600
HpaII CCGG 7 cut(s) 162, 230, 497, 506, 515, 704, 861
HphI GGTGA 2 cut(s) 247, 607
Hpy166II GTNNAC 1 cut(s) 873
Hpy188I TCNGA 8 cut(s) 22, 67, 157, 213, 490, 537, 677, 837
Hpy188III TCNNGA 6 cut(s) 265, 301, 361, 704, 778, 905
Hpy8I GTNNAC 1 cut(s) 873
Hpy99I CGWCG 5 cut(s) 161, 208, 311, 314, 810
HpyAV CCTTC 7 cut(s) 139, 173, 314, 540, 607, 751, 842
HpyCH4IV ACGT 3 cut(s) 441, 866, 893
HpyCH4V TGCA 2 cut(s) 85, 558
HpyF10VI GCNNNNNNNGC 5 cut(s) 171, 289, 425, 511, 817
HpyF3I CTNAG 3 cut(s) 536, 588, 906
HpySE526I ACGT 3 cut(s) 441, 866, 893
Hsp92I GRCGYC 2 cut(s) 159, 503
Hsp92II CATG 4 cut(s) 55, 352, 531, 781
HspAI GCGC 2 cut(s) 271, 503
KasI GGCGCC 1 cut(s) 502
Kpn2I TCCGGA 1 cut(s) 703
KroI GCCGGC 1 cut(s) 161
KroNI GCCGGC 1 cut(s) 163
Kzo9I GATC 5 cut(s) 200, 297, 324, 355, 762
LmnI GCTCC 2 cut(s) 158, 508
Lsp1109I GCAGC 1 cut(s) 415
LweI GCATC 2 cut(s) 319, 774
MaeII ACGT 3 cut(s) 441, 866, 893
MaeIII GTNAC 2 cut(s) 620, 644
MalI GATC 5 cut(s) 202, 299, 326, 357, 764
MboI GATC 5 cut(s) 200, 297, 324, 355, 762
MboII GAAGA 6 cut(s) 464, 467, 622, 721, 782, 793
MfeI CAATTG 1 cut(s) 842
MhlI GDGCHC 2 cut(s) 155, 227
MluCI AATT 2 cut(s) 88, 842
Mly113I GGCGCC 1 cut(s) 503
MlyI GAGTC 1 cut(s) 235
MmeI TCCRAC 1 cut(s) 180
MreI CGCCGGCG 1 cut(s) 161
MroI TCCGGA 1 cut(s) 703
MroNI GCCGGC 1 cut(s) 161
MseI TTAA 1 cut(s) 192
MslI CAYNNNNRTG 2 cut(s) 56, 782
MspI CCGG 7 cut(s) 162, 230, 497, 506, 515, 704, 861
MspR9I CCNGG 1 cut(s) 861
MunI CAATTG 1 cut(s) 842
MvnI CGCG 2 cut(s) 314, 389
MwoI GCNNNNNNNGC 5 cut(s) 171, 289, 425, 511, 817
NaeI GCCGGC 1 cut(s) 163
NarI GGCGCC 1 cut(s) 503
NciI CCSGG 1 cut(s) 861
NcoI CCATGG 2 cut(s) 51, 527
NdeII GATC 5 cut(s) 200, 297, 324, 355, 762
NgoMIV GCCGGC 1 cut(s) 161
NlaIII CATG 4 cut(s) 55, 352, 531, 781
NmeAIII GCCGAG 4 cut(s) 223, 318, 768, 863
PaeR7I CTCGAG 1 cut(s) 286
PagI TCATGA 1 cut(s) 777
PaqCI CACCTGC 1 cut(s) 141
PcsI WCGNNNNNNNCGW 2 cut(s) 306, 890
PdiI GCCGGC 1 cut(s) 163
PfeI GAWTC 3 cut(s) 485, 532, 600
PkrI GCNGC 9 cut(s) 370, 427, 430, 448, 513, 553, 575, 578, 822
Ple19I CGATCG 1 cut(s) 203
PleI GAGTC 1 cut(s) 235
PluTI GGCGCC 1 cut(s) 506
PmaCI CACGTG 1 cut(s) 442
PmlI CACGTG 1 cut(s) 442
PpsI GAGTC 1 cut(s) 235
Ppu21I YACGTR 2 cut(s) 442, 867
PpuMI RGGWCCY 1 cut(s) 910
PshAI GACNNNNGTC 1 cut(s) 878
Psp124BI GAGCTC 2 cut(s) 155, 227
Psp5II RGGWCCY 1 cut(s) 910
PspCI CACGTG 1 cut(s) 442
PspPI GGNCC 4 cut(s) 282, 701, 729, 910
PspPPI RGGWCCY 1 cut(s) 910
PspXI VCTCGAGB 1 cut(s) 286
PvuI CGATCG 1 cut(s) 203
RsaI GTAC 2 cut(s) 865, 896
RsaNI GTAC 2 cut(s) 864, 895
RseI CAYNNNNRTG 2 cut(s) 56, 782
SacI GAGCTC 2 cut(s) 155, 227
SaqAI TTAA 1 cut(s) 192
SatI GCNGC 9 cut(s) 369, 426, 429, 447, 512, 552, 574, 577, 821
Sau3AI GATC 5 cut(s) 200, 297, 324, 355, 762
Sau96I GGNCC 4 cut(s) 282, 701, 729, 910
SchI GAGTC 1 cut(s) 235
ScrFI CCNGG 1 cut(s) 861
SduI GDGCHC 2 cut(s) 155, 227
SfaNI GCATC 2 cut(s) 319, 774
SfiI GGCCNNNNNGGCC 1 cut(s) 289
SfoI GGCGCC 1 cut(s) 504
Sfr274I CTCGAG 1 cut(s) 286
SgrAI CRCCGGYG 2 cut(s) 161, 229
SinI GGWCC 2 cut(s) 701, 910
SlaI CTCGAG 1 cut(s) 286
SmiMI CAYNNNNRTG 2 cut(s) 56, 782
SmlI CTYRAG 2 cut(s) 286, 359
SmoI CTYRAG 2 cut(s) 286, 359
Sse9I AATT 2 cut(s) 88, 842
SspDI GGCGCC 1 cut(s) 502
SstI GAGCTC 2 cut(s) 155, 227
StyD4I CCNGG 1 cut(s) 859
StyI CCWWGG 3 cut(s) 51, 527, 665
TaiI ACGT 3 cut(s) 444, 869, 896
TaqI TCGA 6 cut(s) 264, 287, 300, 327, 603, 765
TasI AATT 2 cut(s) 88, 842
TauI GCSGC 8 cut(s) 371, 428, 449, 514, 554, 576, 579, 823
TfiI GAWTC 3 cut(s) 485, 532, 600
Tru1I TTAA 1 cut(s) 192
Tru9I TTAA 1 cut(s) 192
TscAI CASTG 1 cut(s) 420
TseI GCWGC 1 cut(s) 428
TspDTI ATGAA 4 cut(s) 395, 729, 766, 794
TspGWI ACGGA 1 cut(s) 890
TspRI CASTG 1 cut(s) 420
VpaK11BI GGWCC 2 cut(s) 701, 910
XhoI CTCGAG 1 cut(s) 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.