Rh7CG341700

Protein of unknown function (DUF1639)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0002115
Physical Location & Seq
Forward (+)
38289389 .. 38289618
230 bp
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UTR
Exon/CDS
Intron
Rh7CG341700.1

Sequence Viewer

Length: 230 bp
ATGAGGATGTGGAATATGAGGACGAGGAAGGCTCCAATTGGCGGTGGTGGCGGCAAGGGGTTGAAAATTGAGGAGAGAAAGGTGAATTACTTGCCGTTGGGGAGTGAGGCTCTGGAGAAGAAGGACGGGCCCAAGTTCTCACTCACTCTCTCCAAGAAGGAGATCGAAGAGGATTTCATAGAGATGCTAGGCCACAGCCCTCCCGCCGCCCCAAGAAGAGGCCCAGAGTG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1639

Protein Analysis

76

Amino Acids

8.46

Weight (kDa)

9.63

Isoelectric Point (pI)

69.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1639 PF07797 50 - 73 1.6e-06 Protein of unknown function (DUF1639)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 42, 51, 204, 207
AfiI CCNNNNNNNGG 2 cut(s) 41, 218
AgsI TTSAA 1 cut(s) 64
AoxI GGCC 3 cut(s) 128, 190, 220
ApaI GGGCCC 1 cut(s) 132
AspS9I GGNCC 3 cut(s) 128, 129, 221
AsuHPI GGTGA 1 cut(s) 94
BaeGI GKGCMC 1 cut(s) 132
BanII GRGCYC 1 cut(s) 132
BceAI ACGGC 1 cut(s) 79
BfaI CTAG 1 cut(s) 188
BisI GCNGC 2 cut(s) 52, 207
BlsI GCNGC 2 cut(s) 53, 208
BmgT120I GGNCC 3 cut(s) 128, 129, 221
BmiI GGNNCC 2 cut(s) 33, 130
BmsI GCATC 1 cut(s) 174
BplI GAGNNNNNCTC 4 cut(s) 16, 48, 94, 126
BpmI CTGGAG 1 cut(s) 134
Bsc4I CCNNNNNNNGG 2 cut(s) 41, 218
BseGI GGATG 1 cut(s) 12
BseLI CCNNNNNNNGG 2 cut(s) 41, 218
BseRI GAGGAG 1 cut(s) 86
BseSI GKGCMC 1 cut(s) 132
BshFI GGCC 3 cut(s) 130, 192, 222
BslI CCNNNNNNNGG 2 cut(s) 41, 218
BsnI GGCC 3 cut(s) 130, 192, 222
Bsp120I GGGCCC 1 cut(s) 128
Bsp1286I GDGCHC 1 cut(s) 132
Bsp143I GATC 1 cut(s) 162
BspACI CCGC 4 cut(s) 42, 51, 204, 207
BspANI GGCC 3 cut(s) 130, 192, 222
BspLI GGNNCC 2 cut(s) 33, 130
BssMI GATC 1 cut(s) 162
Bst6I CTCTTC 2 cut(s) 162, 211
BstF5I GGATG 1 cut(s) 12
BstKTI GATC 1 cut(s) 165
BstMBI GATC 1 cut(s) 162
BstMWI GCNNNNNNNGC 1 cut(s) 48
BstSLI GKGCMC 1 cut(s) 132
BsuRI GGCC 3 cut(s) 130, 192, 222
BtsCI GGATG 1 cut(s) 12
Cfr13I GGNCC 3 cut(s) 128, 129, 221
CviJI RGCY 6 cut(s) 32, 110, 130, 192, 198, 222
CviKI_1 RGCY 6 cut(s) 32, 110, 130, 192, 198, 222
DpnI GATC 1 cut(s) 164
DpnII GATC 1 cut(s) 162
Eam1104I CTCTTC 2 cut(s) 162, 211
EarI CTCTTC 2 cut(s) 162, 211
Eco24I GRGCYC 1 cut(s) 132
EcoT38I GRGCYC 1 cut(s) 132
FaiI YATR 2 cut(s) 17, 179
FauI CCCGC 1 cut(s) 211
Fnu4HI GCNGC 2 cut(s) 52, 207
FokI GGATG 1 cut(s) 19
FriOI GRGCYC 1 cut(s) 132
Fsp4HI GCNGC 2 cut(s) 52, 207
FspBI CTAG 1 cut(s) 188
GluI GCNGC 2 cut(s) 52, 207
GsuI CTGGAG 1 cut(s) 134
HaeIII GGCC 3 cut(s) 130, 192, 222
HphI GGTGA 1 cut(s) 94
Hpy188III TCNNGA 1 cut(s) 113
HpyAV CCTTC 3 cut(s) 22, 115, 151
HpyF10VI GCNNNNNNNGC 1 cut(s) 48
Kzo9I GATC 1 cut(s) 162
LmnI GCTCC 1 cut(s) 37
LpnPI CCDG 1 cut(s) 98
LweI GCATC 1 cut(s) 174
MaeI CTAG 1 cut(s) 188
MalI GATC 1 cut(s) 164
MboI GATC 1 cut(s) 162
MboII GAAGA 3 cut(s) 130, 179, 228
MfeI CAATTG 1 cut(s) 36
MhlI GDGCHC 1 cut(s) 132
MluCI AATT 3 cut(s) 36, 66, 85
MnlI CCTC 7 cut(s) 12, 18, 64, 100, 163, 210, 212
MslI CAYNNNNRTG 1 cut(s) 182
MunI CAATTG 1 cut(s) 36
MwoI GCNNNNNNNGC 1 cut(s) 48
NdeII GATC 1 cut(s) 162
NlaIV GGNNCC 2 cut(s) 33, 130
PkrI GCNGC 2 cut(s) 53, 208
PspN4I GGNNCC 2 cut(s) 33, 130
PspOMI GGGCCC 1 cut(s) 128
PspPI GGNCC 3 cut(s) 128, 129, 221
RseI CAYNNNNRTG 1 cut(s) 182
SatI GCNGC 2 cut(s) 52, 207
Sau3AI GATC 1 cut(s) 162
Sau96I GGNCC 3 cut(s) 128, 129, 221
SduI GDGCHC 1 cut(s) 132
SetI ASST 1 cut(s) 84
SfaNI GCATC 1 cut(s) 174
SmiMI CAYNNNNRTG 1 cut(s) 182
Sse9I AATT 3 cut(s) 36, 66, 85
SsiI CCGC 4 cut(s) 42, 51, 204, 207
SspMI CTAG 1 cut(s) 188
TaqI TCGA 1 cut(s) 165
TasI AATT 3 cut(s) 36, 66, 85
TauI GCSGC 2 cut(s) 54, 209
TspDTI ATGAA 1 cut(s) 166
XspI CTAG 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.