Rh7CG453800

Protein of unknown function (DUF1639)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0002115
Physical Location & Seq
Forward (+)
59719007 .. 59722531
3525 bp
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UTR
Exon/CDS
Intron
Rh7CG453800.1

Sequence Viewer

Length: 312 bp
ATGGGAACTGAGGAGGAGAAGGACGCTGAGGTTTCGAAGGAGGGGGGATCTTCGCAGCCGGTGAGGCTGTGGAATCTGAGGACGAGGAAGGCTCCAATTGGCGGTGGCGGCGGCAAGGGGTTGAAAATTGAGGAGAGAAAGGTGAATTACTTGCCGTTGGAGAGTAAGGCTCTGGAGAAGAAGGACGGGCCCAAGTTCTCACTCACTCTCTCCAAGAAGGAGATCGAAGAGGATTTCATACAGATGCTCGGCCACCGCCCTCCCGCTGCCCCAAGAAGAGGCCCAGAGTGGTGTAGAAGCAATTGGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1639

Protein Analysis

103

Amino Acids

11.56

Weight (kDa)

9.33

Isoelectric Point (pI)

70.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1639 PF07797 70 - 93 1.2e-07 Protein of unknown function (DUF1639)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 102, 108, 111, 256, 264
AclWI GGATC 1 cut(s) 55
AcoI YGGCCR 1 cut(s) 250
AfiI CCNNNNNNNGG 2 cut(s) 101, 278
AgsI TTSAA 1 cut(s) 124
AlwI GGATC 1 cut(s) 55
AoxI GGCC 3 cut(s) 188, 250, 280
ApaI GGGCCC 1 cut(s) 192
ApeKI GCWGC 2 cut(s) 55, 266
AspS9I GGNCC 3 cut(s) 188, 189, 281
AsuHPI GGTGA 2 cut(s) 73, 154
AsuII TTCGAA 1 cut(s) 35
BaeGI GKGCMC 1 cut(s) 192
BanII GRGCYC 1 cut(s) 192
BbvCI CCTCAGC 1 cut(s) 27
BbvI GCAGC 2 cut(s) 67, 253
BceAI ACGGC 1 cut(s) 139
BglI GCCNNNNNGGC 1 cut(s) 64
BisI GCNGC 4 cut(s) 56, 109, 112, 267
BlsI GCNGC 4 cut(s) 57, 110, 113, 268
BmgT120I GGNCC 3 cut(s) 188, 189, 281
BmiI GGNNCC 2 cut(s) 93, 190
BmsI GCATC 1 cut(s) 234
BplI GAGNNNNNCTC 4 cut(s) 76, 108, 154, 186
BpmI CTGGAG 1 cut(s) 194
Bpu10I CCTNAGC 1 cut(s) 27
Bpu14I TTCGAA 1 cut(s) 35
Bsc4I CCNNNNNNNGG 2 cut(s) 101, 278
Bse118I RCCGGY 1 cut(s) 58
BseLI CCNNNNNNNGG 2 cut(s) 101, 278
BseMII CTCAG 2 cut(s) 18, 68
BseRI GAGGAG 3 cut(s) 26, 29, 146
BseSI GKGCMC 1 cut(s) 192
BseXI GCAGC 2 cut(s) 67, 253
BshFI GGCC 3 cut(s) 190, 252, 282
BsiSI CCGG 1 cut(s) 59
BslI CCNNNNNNNGG 2 cut(s) 101, 278
BsnI GGCC 3 cut(s) 190, 252, 282
Bsp119I TTCGAA 1 cut(s) 35
Bsp120I GGGCCC 1 cut(s) 188
Bsp1286I GDGCHC 1 cut(s) 192
Bsp143I GATC 2 cut(s) 47, 222
BspACI CCGC 5 cut(s) 102, 108, 111, 256, 264
BspANI GGCC 3 cut(s) 190, 252, 282
BspCNI CTCAG 2 cut(s) 19, 69
BspLI GGNNCC 2 cut(s) 93, 190
BspPI GGATC 1 cut(s) 55
BspT104I TTCGAA 1 cut(s) 35
BsrFI RCCGGY 1 cut(s) 58
BssAI RCCGGY 1 cut(s) 58
BssMI GATC 2 cut(s) 47, 222
Bst6I CTCTTC 2 cut(s) 222, 271
BstBI TTCGAA 1 cut(s) 35
BstDEI CTNAG 3 cut(s) 9, 27, 77
BstKTI GATC 2 cut(s) 50, 225
BstMBI GATC 2 cut(s) 47, 222
BstMWI GCNNNNNNNGC 2 cut(s) 64, 108
BstSLI GKGCMC 1 cut(s) 192
BstV1I GCAGC 2 cut(s) 67, 253
BstX2I RGATCY 1 cut(s) 47
BstYI RGATCY 1 cut(s) 47
BsuRI GGCC 3 cut(s) 190, 252, 282
Cfr10I RCCGGY 1 cut(s) 58
Cfr13I GGNCC 3 cut(s) 188, 189, 281
CseI GACGC 1 cut(s) 32
CviJI RGCY 7 cut(s) 58, 67, 92, 170, 190, 252, 282
CviKI_1 RGCY 7 cut(s) 58, 67, 92, 170, 190, 252, 282
DdeI CTNAG 3 cut(s) 9, 27, 77
DpnI GATC 2 cut(s) 49, 224
DpnII GATC 2 cut(s) 47, 222
EaeI YGGCCR 1 cut(s) 250
Eam1104I CTCTTC 2 cut(s) 222, 271
EarI CTCTTC 2 cut(s) 222, 271
Eco24I GRGCYC 1 cut(s) 192
EcoT38I GRGCYC 1 cut(s) 192
FaiI YATR 2 cut(s) 239, 310
FauI CCCGC 1 cut(s) 271
Fnu4HI GCNGC 4 cut(s) 56, 109, 112, 267
FriOI GRGCYC 1 cut(s) 192
Fsp4HI GCNGC 4 cut(s) 56, 109, 112, 267
GluI GCNGC 4 cut(s) 56, 109, 112, 267
GsuI CTGGAG 1 cut(s) 194
HaeIII GGCC 3 cut(s) 190, 252, 282
HapII CCGG 1 cut(s) 59
HgaI GACGC 1 cut(s) 32
HinfI GANTC 1 cut(s) 73
HpaII CCGG 1 cut(s) 59
HphI GGTGA 2 cut(s) 73, 154
Hpy188I TCNGA 1 cut(s) 78
Hpy188III TCNNGA 1 cut(s) 173
HpyAV CCTTC 5 cut(s) 13, 31, 82, 175, 211
HpyF10VI GCNNNNNNNGC 2 cut(s) 64, 108
HpyF3I CTNAG 3 cut(s) 9, 27, 77
Kzo9I GATC 2 cut(s) 47, 222
LmnI GCTCC 1 cut(s) 97
LpnPI CCDG 3 cut(s) 72, 158, 297
Lsp1109I GCAGC 2 cut(s) 67, 253
LweI GCATC 1 cut(s) 234
MalI GATC 2 cut(s) 49, 224
MboI GATC 2 cut(s) 47, 222
MboII GAAGA 4 cut(s) 42, 190, 239, 288
MfeI CAATTG 2 cut(s) 96, 301
MflI RGATCY 1 cut(s) 47
MhlI GDGCHC 1 cut(s) 192
MluCI AATT 4 cut(s) 96, 126, 145, 301
MmeI TCCRAC 1 cut(s) 138
MslI CAYNNNNRTG 1 cut(s) 242
MspA1I CMGCKG 1 cut(s) 266
MspI CCGG 1 cut(s) 59
MunI CAATTG 2 cut(s) 96, 301
MwoI GCNNNNNNNGC 2 cut(s) 64, 108
NdeII GATC 2 cut(s) 47, 222
NlaIV GGNNCC 2 cut(s) 93, 190
NmeAIII GCCGAG 1 cut(s) 228
NspV TTCGAA 1 cut(s) 35
PfeI GAWTC 1 cut(s) 73
PkrI GCNGC 4 cut(s) 57, 110, 113, 268
PspN4I GGNNCC 2 cut(s) 93, 190
PspOMI GGGCCC 1 cut(s) 188
PspPI GGNCC 3 cut(s) 188, 189, 281
PsuI RGATCY 1 cut(s) 47
RseI CAYNNNNRTG 1 cut(s) 242
SatI GCNGC 4 cut(s) 56, 109, 112, 267
Sau3AI GATC 2 cut(s) 47, 222
Sau96I GGNCC 3 cut(s) 188, 189, 281
SduI GDGCHC 1 cut(s) 192
SetI ASST 2 cut(s) 33, 144
SfaNI GCATC 1 cut(s) 234
SfuI TTCGAA 1 cut(s) 35
SmiMI CAYNNNNRTG 1 cut(s) 242
Sse9I AATT 4 cut(s) 96, 126, 145, 301
SsiI CCGC 5 cut(s) 102, 108, 111, 256, 264
TaqI TCGA 2 cut(s) 35, 225
TasI AATT 4 cut(s) 96, 126, 145, 301
TauI GCSGC 2 cut(s) 111, 114
TfiI GAWTC 1 cut(s) 73
TseI GCWGC 2 cut(s) 55, 266
TspDTI ATGAA 1 cut(s) 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.